Diversity of Cryptococcus and Dioszegia yeasts (Basidiomycota) inhabiting arbuscular mycorrhizal roots or spores.
Identifieur interne : 003763 ( Main/Corpus ); précédent : 003762; suivant : 003764Diversity of Cryptococcus and Dioszegia yeasts (Basidiomycota) inhabiting arbuscular mycorrhizal roots or spores.
Auteurs : Carsten Renker ; Verena Blanke ; Boris Börstler ; Jochen Heinrichs ; François BuscotSource :
- FEMS yeast research [ 1567-1356 ] ; 2004.
English descriptors
- KwdEn :
- Basidiomycota (classification), Basidiomycota (genetics), Cryptococcus (classification), Cryptococcus (genetics), DNA, Ribosomal Spacer (analysis), Ecosystem (MeSH), Molecular Sequence Data (MeSH), Mycorrhizae (MeSH), Phylogeny (MeSH), Plant Roots (microbiology), Sequence Analysis, DNA (MeSH), Soil Microbiology (MeSH), Spores, Fungal (physiology).
- MESH :
- chemical , analysis : DNA, Ribosomal Spacer.
- classification : Basidiomycota, Cryptococcus.
- genetics : Basidiomycota, Cryptococcus.
- microbiology : Plant Roots.
- physiology : Spores, Fungal.
- Ecosystem, Molecular Sequence Data, Mycorrhizae, Phylogeny, Sequence Analysis, DNA, Soil Microbiology.
Abstract
The genera Cryptococcus and Dioszegia contain basidiomycetous yeasts found in a wide range of habitats. Primers to amplify the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA (nrDNA) of arbuscular mycorrhizal fungi (AMF) also allow detecting members of this yeast group. Here we report the results of a sequence analysis using maximum parsimony on a set of 50 ITS sequences of yeasts associated with AMF structures (roots of 26 plant species, AM spores) from six field sites in Central Germany. Among 10 separated taxa, respectively five in the Tremellales and two in the Filobasidiales had unknown sequences. Therefore it was not possible to assign these sequences to any known species. The study indicates that exploring the diversity of Cryptococcus and Dioszegia in soil habitats with molecular methods might enlarge the actually estimated biodiversity of the group.
DOI: 10.1016/j.femsyr.2004.01.001
PubMed: 15040947
Links to Exploration step
pubmed:15040947Le document en format XML
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Primers to amplify the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA (nrDNA) of arbuscular mycorrhizal fungi (AMF) also allow detecting members of this yeast group. Here we report the results of a sequence analysis using maximum parsimony on a set of 50 ITS sequences of yeasts associated with AMF structures (roots of 26 plant species, AM spores) from six field sites in Central Germany. Among 10 separated taxa, respectively five in the Tremellales and two in the Filobasidiales had unknown sequences. Therefore it was not possible to assign these sequences to any known species. The study indicates that exploring the diversity of Cryptococcus and Dioszegia in soil habitats with molecular methods might enlarge the actually estimated biodiversity of the group.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">15040947</PMID><DateCompleted><Year>2004</Year><Month>06</Month><Day>03</Day></DateCompleted><DateRevised><Year>2004</Year><Month>03</Month><Day>25</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">1567-1356</ISSN><JournalIssue CitedMedium="Print"><Volume>4</Volume><Issue>6</Issue><PubDate><Year>2004</Year><Month>Mar</Month></PubDate></JournalIssue><Title>FEMS yeast research</Title><ISOAbbreviation>FEMS Yeast Res</ISOAbbreviation></Journal><ArticleTitle>Diversity of Cryptococcus and Dioszegia yeasts (Basidiomycota) inhabiting arbuscular mycorrhizal roots or spores.</ArticleTitle><Pagination><MedlinePgn>597-603</MedlinePgn></Pagination><Abstract><AbstractText>The genera Cryptococcus and Dioszegia contain basidiomycetous yeasts found in a wide range of habitats. Primers to amplify the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA (nrDNA) of arbuscular mycorrhizal fungi (AMF) also allow detecting members of this yeast group. Here we report the results of a sequence analysis using maximum parsimony on a set of 50 ITS sequences of yeasts associated with AMF structures (roots of 26 plant species, AM spores) from six field sites in Central Germany. Among 10 separated taxa, respectively five in the Tremellales and two in the Filobasidiales had unknown sequences. Therefore it was not possible to assign these sequences to any known species. The study indicates that exploring the diversity of Cryptococcus and Dioszegia in soil habitats with molecular methods might enlarge the actually estimated biodiversity of the group.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Renker</LastName><ForeName>Carsten</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Terrestrial Ecology, Institute of Botany, University of Leipzig, Johannisallee 21, D-04103 Leipzig, Germany. crenker@uni-leipzig.de</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Blanke</LastName><ForeName>Verena</ForeName><Initials>V</Initials></Author><Author ValidYN="Y"><LastName>Börstler</LastName><ForeName>Boris</ForeName><Initials>B</Initials></Author><Author ValidYN="Y"><LastName>Heinrichs</LastName><ForeName>Jochen</ForeName><Initials>J</Initials></Author><Author 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