Identification of genes differentially expressed in extraradical mycelium and ectomycorrhizal roots during Paxillus involutus-Betula pendula ectomycorrhizal symbiosis.
Identifieur interne : 003635 ( Main/Corpus ); précédent : 003634; suivant : 003636Identification of genes differentially expressed in extraradical mycelium and ectomycorrhizal roots during Paxillus involutus-Betula pendula ectomycorrhizal symbiosis.
Auteurs : Mélanie Morel ; Christophe Jacob ; Annegret Kohler ; Tomas Johansson ; Francis Martin ; Michel Chalot ; Annick BrunSource :
- Applied and environmental microbiology [ 0099-2240 ] ; 2005.
English descriptors
- KwdEn :
- Basidiomycota (genetics), Basidiomycota (growth & development), Basidiomycota (metabolism), Betula (growth & development), Betula (microbiology), Ecosystem (MeSH), Fungal Proteins (genetics), Fungal Proteins (metabolism), Gene Expression Profiling (MeSH), Gene Expression Regulation, Fungal (MeSH), Mycelium (genetics), Mycelium (metabolism), Mycorrhizae (MeSH), Oligonucleotide Array Sequence Analysis (MeSH), Plant Roots (growth & development), Plant Roots (microbiology), Soil (MeSH), Soil Microbiology (MeSH), Symbiosis (MeSH).
- MESH :
- chemical , genetics : Fungal Proteins.
- genetics : Basidiomycota, Mycelium.
- growth & development : Basidiomycota, Betula, Plant Roots.
- metabolism : Basidiomycota, Fungal Proteins, Mycelium.
- microbiology : Betula, Plant Roots.
- Ecosystem, Gene Expression Profiling, Gene Expression Regulation, Fungal, Mycorrhizae, Oligonucleotide Array Sequence Analysis, Soil, Soil Microbiology, Symbiosis.
Abstract
The development of ectomycorrhizal symbiosis leads to drastic changes in gene expression in both partners. However, little is known about the spatial regulation of symbiosis-regulated genes. Using cDNA array profiling, we compared the levels of expression of fungal genes corresponding to approximately 1,200 expressed sequenced tags in the ectomycorrhizal root tips (ECM) and the connected extraradical mycelium (EM) for the Paxillus involutus-Betula pendula ectomycorrhizal association grown on peat in a microcosm system. Sixty-five unique genes were found to be differentially expressed in these two fungal compartments. In ECM, a gene coding for a putative phosphatidylserine decarboxylase (Psd) was up-regulated by 24-fold, while genes coding for urea (Dur3) and spermine (Tpo3) transporters were up-regulated 4.1- and 6.2-fold in EM. Moreover, urea was the major nitrogen compound found in EM by gas chromatography-mass spectrometry analysis. These results suggest that (i) there is a spatial difference in the patterns of fungal gene expression between ECM and EM, (ii) urea and polyamine transporters could facilitate the translocation of nitrogen compounds within the EM network, and (iii) fungal Psd may contribute to membrane remodeling during ectomycorrhiza formation.
DOI: 10.1128/AEM.71.1.382-391.2005
PubMed: 15640212
PubMed Central: PMC544268
Links to Exploration step
pubmed:15640212Le document en format XML
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Michel.Chalot@scbiol.uhp-nancy.fr</nlm:affiliation></affiliation></author><author><name sortKey="Jacob, Christophe" sort="Jacob, Christophe" uniqKey="Jacob C" first="Christophe" last="Jacob">Christophe Jacob</name></author><author><name sortKey="Kohler, Annegret" sort="Kohler, Annegret" uniqKey="Kohler A" first="Annegret" last="Kohler">Annegret Kohler</name></author><author><name sortKey="Johansson, Tomas" sort="Johansson, Tomas" uniqKey="Johansson T" first="Tomas" last="Johansson">Tomas Johansson</name></author><author><name sortKey="Martin, Francis" sort="Martin, Francis" uniqKey="Martin F" first="Francis" last="Martin">Francis Martin</name></author><author><name sortKey="Chalot, Michel" sort="Chalot, Michel" uniqKey="Chalot M" first="Michel" last="Chalot">Michel Chalot</name></author><author><name sortKey="Brun, Annick" sort="Brun, Annick" uniqKey="Brun A" first="Annick" last="Brun">Annick Brun</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2005">2005</date><idno type="RBID">pubmed:15640212</idno><idno type="pmid">15640212</idno><idno type="doi">10.1128/AEM.71.1.382-391.2005</idno><idno type="pmc">PMC544268</idno><idno type="wicri:Area/Main/Corpus">003635</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">003635</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Identification of genes differentially expressed in extraradical mycelium and ectomycorrhizal roots during Paxillus involutus-Betula pendula ectomycorrhizal symbiosis.</title><author><name sortKey="Morel, Melanie" sort="Morel, Melanie" uniqKey="Morel M" first="Mélanie" last="Morel">Mélanie Morel</name><affiliation><nlm:affiliation>Université Henri Poincaré-Nancy I, UMR INRA/UHP 1136, Interactions Arbres/Micro-Organismes, Faculté des Sciences et Techniques, BP 239, F-54506 Vandoeuvre-les-Nancy Cedex, France. Michel.Chalot@scbiol.uhp-nancy.fr</nlm:affiliation></affiliation></author><author><name sortKey="Jacob, Christophe" sort="Jacob, Christophe" uniqKey="Jacob C" first="Christophe" last="Jacob">Christophe Jacob</name></author><author><name sortKey="Kohler, Annegret" sort="Kohler, Annegret" uniqKey="Kohler A" first="Annegret" last="Kohler">Annegret Kohler</name></author><author><name sortKey="Johansson, Tomas" sort="Johansson, Tomas" uniqKey="Johansson T" first="Tomas" last="Johansson">Tomas Johansson</name></author><author><name sortKey="Martin, Francis" sort="Martin, Francis" uniqKey="Martin F" first="Francis" last="Martin">Francis Martin</name></author><author><name sortKey="Chalot, Michel" sort="Chalot, Michel" uniqKey="Chalot M" first="Michel" last="Chalot">Michel Chalot</name></author><author><name sortKey="Brun, Annick" sort="Brun, Annick" uniqKey="Brun A" first="Annick" last="Brun">Annick Brun</name></author></analytic><series><title level="j">Applied and environmental microbiology</title><idno type="ISSN">0099-2240</idno><imprint><date when="2005" type="published">2005</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Basidiomycota (genetics)</term><term>Basidiomycota (growth & development)</term><term>Basidiomycota (metabolism)</term><term>Betula (growth & development)</term><term>Betula (microbiology)</term><term>Ecosystem (MeSH)</term><term>Fungal Proteins (genetics)</term><term>Fungal Proteins (metabolism)</term><term>Gene Expression Profiling (MeSH)</term><term>Gene Expression Regulation, Fungal (MeSH)</term><term>Mycelium (genetics)</term><term>Mycelium (metabolism)</term><term>Mycorrhizae (MeSH)</term><term>Oligonucleotide Array Sequence Analysis (MeSH)</term><term>Plant Roots (growth & development)</term><term>Plant Roots (microbiology)</term><term>Soil (MeSH)</term><term>Soil Microbiology (MeSH)</term><term>Symbiosis (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Fungal Proteins</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Basidiomycota</term><term>Mycelium</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Basidiomycota</term><term>Betula</term><term>Plant Roots</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Basidiomycota</term><term>Fungal Proteins</term><term>Mycelium</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Betula</term><term>Plant Roots</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Ecosystem</term><term>Gene Expression Profiling</term><term>Gene Expression Regulation, Fungal</term><term>Mycorrhizae</term><term>Oligonucleotide Array Sequence Analysis</term><term>Soil</term><term>Soil Microbiology</term><term>Symbiosis</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The development of ectomycorrhizal symbiosis leads to drastic changes in gene expression in both partners. However, little is known about the spatial regulation of symbiosis-regulated genes. Using cDNA array profiling, we compared the levels of expression of fungal genes corresponding to approximately 1,200 expressed sequenced tags in the ectomycorrhizal root tips (ECM) and the connected extraradical mycelium (EM) for the Paxillus involutus-Betula pendula ectomycorrhizal association grown on peat in a microcosm system. Sixty-five unique genes were found to be differentially expressed in these two fungal compartments. In ECM, a gene coding for a putative phosphatidylserine decarboxylase (Psd) was up-regulated by 24-fold, while genes coding for urea (Dur3) and spermine (Tpo3) transporters were up-regulated 4.1- and 6.2-fold in EM. Moreover, urea was the major nitrogen compound found in EM by gas chromatography-mass spectrometry analysis. These results suggest that (i) there is a spatial difference in the patterns of fungal gene expression between ECM and EM, (ii) urea and polyamine transporters could facilitate the translocation of nitrogen compounds within the EM network, and (iii) fungal Psd may contribute to membrane remodeling during ectomycorrhiza formation.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">15640212</PMID><DateCompleted><Year>2005</Year><Month>03</Month><Day>15</Day></DateCompleted><DateRevised><Year>2019</Year><Month>01</Month><Day>08</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0099-2240</ISSN><JournalIssue CitedMedium="Print"><Volume>71</Volume><Issue>1</Issue><PubDate><Year>2005</Year><Month>Jan</Month></PubDate></JournalIssue><Title>Applied and environmental microbiology</Title><ISOAbbreviation>Appl Environ Microbiol</ISOAbbreviation></Journal><ArticleTitle>Identification of genes differentially expressed in extraradical mycelium and ectomycorrhizal roots during Paxillus involutus-Betula pendula ectomycorrhizal symbiosis.</ArticleTitle><Pagination><MedlinePgn>382-91</MedlinePgn></Pagination><Abstract><AbstractText>The development of ectomycorrhizal symbiosis leads to drastic changes in gene expression in both partners. However, little is known about the spatial regulation of symbiosis-regulated genes. Using cDNA array profiling, we compared the levels of expression of fungal genes corresponding to approximately 1,200 expressed sequenced tags in the ectomycorrhizal root tips (ECM) and the connected extraradical mycelium (EM) for the Paxillus involutus-Betula pendula ectomycorrhizal association grown on peat in a microcosm system. Sixty-five unique genes were found to be differentially expressed in these two fungal compartments. In ECM, a gene coding for a putative phosphatidylserine decarboxylase (Psd) was up-regulated by 24-fold, while genes coding for urea (Dur3) and spermine (Tpo3) transporters were up-regulated 4.1- and 6.2-fold in EM. Moreover, urea was the major nitrogen compound found in EM by gas chromatography-mass spectrometry analysis. These results suggest that (i) there is a spatial difference in the patterns of fungal gene expression between ECM and EM, (ii) urea and polyamine transporters could facilitate the translocation of nitrogen compounds within the EM network, and (iii) fungal Psd may contribute to membrane remodeling during ectomycorrhiza formation.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Morel</LastName><ForeName>Mélanie</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Université Henri Poincaré-Nancy I, UMR INRA/UHP 1136, Interactions Arbres/Micro-Organismes, Faculté des Sciences et Techniques, BP 239, F-54506 Vandoeuvre-les-Nancy Cedex, France. Michel.Chalot@scbiol.uhp-nancy.fr</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jacob</LastName><ForeName>Christophe</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Kohler</LastName><ForeName>Annegret</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Johansson</LastName><ForeName>Tomas</ForeName><Initials>T</Initials></Author><Author ValidYN="Y"><LastName>Martin</LastName><ForeName>Francis</ForeName><Initials>F</Initials></Author><Author ValidYN="Y"><LastName>Chalot</LastName><ForeName>Michel</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Brun</LastName><ForeName>Annick</ForeName><Initials>A</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United 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