Molecular markers detecting an ectomycorrhizal Suillus collinitus strain on Pinus halepensis roots suggest successful inoculation and persistence in Mediterranean nursery and plantation.
Identifieur interne : 003358 ( Main/Corpus ); précédent : 003357; suivant : 003359Molecular markers detecting an ectomycorrhizal Suillus collinitus strain on Pinus halepensis roots suggest successful inoculation and persistence in Mediterranean nursery and plantation.
Auteurs : Khalid El Karkouri ; Marc-André Selosse ; Daniel MousainSource :
- FEMS microbiology ecology [ 0168-6496 ] ; 2006.
English descriptors
- KwdEn :
- Agriculture (MeSH), Biomarkers (analysis), DNA Primers (MeSH), DNA, Fungal (genetics), DNA, Ribosomal Spacer (genetics), Environmental Monitoring (MeSH), Mediterranean Region (MeSH), Mycorrhizae (genetics), Mycorrhizae (isolation & purification), Pinus (microbiology), Plant Roots (microbiology), Polymerase Chain Reaction (methods), Polymorphism, Restriction Fragment Length (MeSH), Seedlings (microbiology), Species Specificity (MeSH).
- MESH :
- chemical , analysis : Biomarkers.
- chemical , genetics : DNA, Fungal, DNA, Ribosomal Spacer.
- geographic : Mediterranean Region.
- genetics : Mycorrhizae.
- isolation & purification : Mycorrhizae.
- methods : Polymerase Chain Reaction.
- microbiology : Pinus, Plant Roots, Seedlings.
- Agriculture, DNA Primers, Environmental Monitoring, Polymorphism, Restriction Fragment Length, Species Specificity.
Abstract
Survival of the ectomycorrhizal fungal strain Suillus collinitus Sc-32 on Pinus halepensis after inoculation and outplanting was monitored in a Mediterranean plantation. Three molecular fingerprints were developed: RFLP of the internal transcribed spacer ribosomal DNA, intersimple sequence repeat, and a specific sequence-characterized amplified region marker. The inoculant was demonstrated to survive on inoculated seedlings 4 years after outplanting (56 months after inoculation), although S. collinitus was not fruiting. The designed markers set allows reliable and inexpensive monitoring of inoculated seedlings and suggests that S. collinitus is suitable for inoculation of Mediterranean Pinus. These data are discussed in the framework of suilloid population ecology.
DOI: 10.1111/j.1574-6941.2005.00014.x
PubMed: 16420623
Links to Exploration step
pubmed:16420623Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Molecular markers detecting an ectomycorrhizal Suillus collinitus strain on Pinus halepensis roots suggest successful inoculation and persistence in Mediterranean nursery and plantation.</title>
<author><name sortKey="El Karkouri, Khalid" sort="El Karkouri, Khalid" uniqKey="El Karkouri K" first="Khalid" last="El Karkouri">Khalid El Karkouri</name>
<affiliation><nlm:affiliation>UMR INRA-Agro.M Rhizosphère & Symbiose, Montpellier Cedex 1, France. khalid.2@wanadoo.fr</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Selosse, Marc Andre" sort="Selosse, Marc Andre" uniqKey="Selosse M" first="Marc-André" last="Selosse">Marc-André Selosse</name>
</author>
<author><name sortKey="Mousain, Daniel" sort="Mousain, Daniel" uniqKey="Mousain D" first="Daniel" last="Mousain">Daniel Mousain</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2006">2006</date>
<idno type="RBID">pubmed:16420623</idno>
<idno type="pmid">16420623</idno>
<idno type="doi">10.1111/j.1574-6941.2005.00014.x</idno>
<idno type="wicri:Area/Main/Corpus">003358</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">003358</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Molecular markers detecting an ectomycorrhizal Suillus collinitus strain on Pinus halepensis roots suggest successful inoculation and persistence in Mediterranean nursery and plantation.</title>
<author><name sortKey="El Karkouri, Khalid" sort="El Karkouri, Khalid" uniqKey="El Karkouri K" first="Khalid" last="El Karkouri">Khalid El Karkouri</name>
<affiliation><nlm:affiliation>UMR INRA-Agro.M Rhizosphère & Symbiose, Montpellier Cedex 1, France. khalid.2@wanadoo.fr</nlm:affiliation>
</affiliation>
</author>
<author><name sortKey="Selosse, Marc Andre" sort="Selosse, Marc Andre" uniqKey="Selosse M" first="Marc-André" last="Selosse">Marc-André Selosse</name>
</author>
<author><name sortKey="Mousain, Daniel" sort="Mousain, Daniel" uniqKey="Mousain D" first="Daniel" last="Mousain">Daniel Mousain</name>
</author>
</analytic>
<series><title level="j">FEMS microbiology ecology</title>
<idno type="ISSN">0168-6496</idno>
<imprint><date when="2006" type="published">2006</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Agriculture (MeSH)</term>
<term>Biomarkers (analysis)</term>
<term>DNA Primers (MeSH)</term>
<term>DNA, Fungal (genetics)</term>
<term>DNA, Ribosomal Spacer (genetics)</term>
<term>Environmental Monitoring (MeSH)</term>
<term>Mediterranean Region (MeSH)</term>
<term>Mycorrhizae (genetics)</term>
<term>Mycorrhizae (isolation & purification)</term>
<term>Pinus (microbiology)</term>
<term>Plant Roots (microbiology)</term>
<term>Polymerase Chain Reaction (methods)</term>
<term>Polymorphism, Restriction Fragment Length (MeSH)</term>
<term>Seedlings (microbiology)</term>
<term>Species Specificity (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>Biomarkers</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Fungal</term>
<term>DNA, Ribosomal Spacer</term>
</keywords>
<keywords scheme="MESH" type="geographic" xml:lang="en"><term>Mediterranean Region</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Mycorrhizae</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Mycorrhizae</term>
</keywords>
<keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Polymerase Chain Reaction</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Pinus</term>
<term>Plant Roots</term>
<term>Seedlings</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Agriculture</term>
<term>DNA Primers</term>
<term>Environmental Monitoring</term>
<term>Polymorphism, Restriction Fragment Length</term>
<term>Species Specificity</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Survival of the ectomycorrhizal fungal strain Suillus collinitus Sc-32 on Pinus halepensis after inoculation and outplanting was monitored in a Mediterranean plantation. Three molecular fingerprints were developed: RFLP of the internal transcribed spacer ribosomal DNA, intersimple sequence repeat, and a specific sequence-characterized amplified region marker. The inoculant was demonstrated to survive on inoculated seedlings 4 years after outplanting (56 months after inoculation), although S. collinitus was not fruiting. The designed markers set allows reliable and inexpensive monitoring of inoculated seedlings and suggests that S. collinitus is suitable for inoculation of Mediterranean Pinus. These data are discussed in the framework of suilloid population ecology.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">16420623</PMID>
<DateCompleted><Year>2006</Year>
<Month>04</Month>
<Day>17</Day>
</DateCompleted>
<DateRevised><Year>2015</Year>
<Month>11</Month>
<Day>19</Day>
</DateRevised>
<Article PubModel="Print"><Journal><ISSN IssnType="Print">0168-6496</ISSN>
<JournalIssue CitedMedium="Print"><Volume>55</Volume>
<Issue>1</Issue>
<PubDate><Year>2006</Year>
<Month>Jan</Month>
</PubDate>
</JournalIssue>
<Title>FEMS microbiology ecology</Title>
<ISOAbbreviation>FEMS Microbiol Ecol</ISOAbbreviation>
</Journal>
<ArticleTitle>Molecular markers detecting an ectomycorrhizal Suillus collinitus strain on Pinus halepensis roots suggest successful inoculation and persistence in Mediterranean nursery and plantation.</ArticleTitle>
<Pagination><MedlinePgn>146-58</MedlinePgn>
</Pagination>
<Abstract><AbstractText>Survival of the ectomycorrhizal fungal strain Suillus collinitus Sc-32 on Pinus halepensis after inoculation and outplanting was monitored in a Mediterranean plantation. Three molecular fingerprints were developed: RFLP of the internal transcribed spacer ribosomal DNA, intersimple sequence repeat, and a specific sequence-characterized amplified region marker. The inoculant was demonstrated to survive on inoculated seedlings 4 years after outplanting (56 months after inoculation), although S. collinitus was not fruiting. The designed markers set allows reliable and inexpensive monitoring of inoculated seedlings and suggests that S. collinitus is suitable for inoculation of Mediterranean Pinus. These data are discussed in the framework of suilloid population ecology.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>El Karkouri</LastName>
<ForeName>Khalid</ForeName>
<Initials>K</Initials>
<AffiliationInfo><Affiliation>UMR INRA-Agro.M Rhizosphère & Symbiose, Montpellier Cedex 1, France. khalid.2@wanadoo.fr</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Selosse</LastName>
<ForeName>Marc-André</ForeName>
<Initials>MA</Initials>
</Author>
<Author ValidYN="Y"><LastName>Mousain</LastName>
<ForeName>Daniel</ForeName>
<Initials>D</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
</Article>
<MedlineJournalInfo><Country>England</Country>
<MedlineTA>FEMS Microbiol Ecol</MedlineTA>
<NlmUniqueID>8901229</NlmUniqueID>
<ISSNLinking>0168-6496</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D015415">Biomarkers</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D017931">DNA Primers</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D004271">DNA, Fungal</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D021903">DNA, Ribosomal Spacer</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D000383" MajorTopicYN="N">Agriculture</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015415" MajorTopicYN="N">Biomarkers</DescriptorName>
<QualifierName UI="Q000032" MajorTopicYN="N">analysis</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017931" MajorTopicYN="N">DNA Primers</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004271" MajorTopicYN="N">DNA, Fungal</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D021903" MajorTopicYN="N">DNA, Ribosomal Spacer</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004784" MajorTopicYN="N">Environmental Monitoring</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D019083" MajorTopicYN="N" Type="Geographic">Mediterranean Region</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D028223" MajorTopicYN="N">Pinus</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016133" MajorTopicYN="N">Polymerase Chain Reaction</DescriptorName>
<QualifierName UI="Q000379" MajorTopicYN="N">methods</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012150" MajorTopicYN="N">Polymorphism, Restriction Fragment Length</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D036226" MajorTopicYN="N">Seedlings</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D013045" MajorTopicYN="N">Species Specificity</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2006</Year>
<Month>1</Month>
<Day>20</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2006</Year>
<Month>4</Month>
<Day>18</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2006</Year>
<Month>1</Month>
<Day>20</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">16420623</ArticleId>
<ArticleId IdType="pii">FEM014</ArticleId>
<ArticleId IdType="doi">10.1111/j.1574-6941.2005.00014.x</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/MycorrhizaeV1/Data/Main/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 003358 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Corpus/biblio.hfd -nk 003358 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Bois |area= MycorrhizaeV1 |flux= Main |étape= Corpus |type= RBID |clé= pubmed:16420623 |texte= Molecular markers detecting an ectomycorrhizal Suillus collinitus strain on Pinus halepensis roots suggest successful inoculation and persistence in Mediterranean nursery and plantation. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Corpus/RBID.i -Sk "pubmed:16420623" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Corpus/biblio.hfd \ | NlmPubMed2Wicri -a MycorrhizaeV1
![]() | This area was generated with Dilib version V0.6.37. | ![]() |