Spatial structure and richness of ectomycorrhizal fungi colonizing bioassay seedlings from resistant propagules in a Sierra Nevada forest: comparisons using two hosts that exhibit different seedling establishment patterns.
Identifieur interne : 003148 ( Main/Corpus ); précédent : 003147; suivant : 003149Spatial structure and richness of ectomycorrhizal fungi colonizing bioassay seedlings from resistant propagules in a Sierra Nevada forest: comparisons using two hosts that exhibit different seedling establishment patterns.
Auteurs : Antonio Izzo ; Diem Thi Nguyen ; Thomas D. BrunsSource :
- Mycologia [ 0027-5514 ]
English descriptors
- KwdEn :
- Abies (growth & development), Abies (microbiology), Ascomycota (classification), Ascomycota (genetics), Basidiomycota (classification), Basidiomycota (genetics), California (MeSH), DNA, Ribosomal Spacer (analysis), Ecosystem (MeSH), Molecular Sequence Data (MeSH), Mycorrhizae (MeSH), Pinus (growth & development), Plant Roots (microbiology), Polymorphism, Restriction Fragment Length (MeSH), Seedlings (growth & development), Seedlings (microbiology), Sequence Analysis, DNA (MeSH), Soil Microbiology (MeSH), Trees (MeSH).
- MESH :
- chemical , analysis : DNA, Ribosomal Spacer.
- geographic : California.
- classification : Ascomycota, Basidiomycota.
- genetics : Ascomycota, Basidiomycota.
- growth & development : Abies, Pinus, Seedlings.
- microbiology : Abies, Plant Roots, Seedlings.
- Ecosystem, Molecular Sequence Data, Mycorrhizae, Polymorphism, Restriction Fragment Length, Sequence Analysis, DNA, Soil Microbiology, Trees.
Abstract
In this study we analyzed the spatial structure of ectomycorrhizal fungi present in the soils as resistant propagules (e.g. spores or sclerotia) in a mixed-conifer forest in the Sierra Nevada, California. Soils were collected under old-growth Abies spp. stands across approximately 1 km and bioassayed with seedlings of hosts that establish best in stronger light (Pinus jeffreyi) or that are shade-tolerant (Abies concolor). Ectomycorrhizal fungi colonizing the roots were characterized with molecular techniques (ITSRFLP and DNA sequence analysis). Wilcoxina, five Rhizopogon species and Cenococcum were the most frequent of 17 detected species. No spatial structure was detected in the resistant propagule community as a whole, but P. jeffreyi seedlings had higher species richness and associated with seven Rhizopogon species that were not detected on A. concolor seedlings. We drew two conclusions from comparisons between this study and a prior study of the ectomycorrhizal community on mature trees in the same forest: (i) the resistant propagule community was considerably simpler and more homogeneous than the active resident community across the forest and (ii) Cenococcum and Wilcoxina species are abundant in both communities.
DOI: 10.3852/mycologia.98.3.374
PubMed: 17040066
Links to Exploration step
pubmed:17040066Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Spatial structure and richness of ectomycorrhizal fungi colonizing bioassay seedlings from resistant propagules in a Sierra Nevada forest: comparisons using two hosts that exhibit different seedling establishment patterns.</title><author><name sortKey="Izzo, Antonio" sort="Izzo, Antonio" uniqKey="Izzo A" first="Antonio" last="Izzo">Antonio Izzo</name><affiliation><nlm:affiliation>Department of Plant and Microbial Biology, 321 Koshland Hall, University of California, Berkeley, California 94720-3102, USA. Izzo@tfrl.ars.usda.gov</nlm:affiliation></affiliation></author><author><name sortKey="Nguyen, Diem Thi" sort="Nguyen, Diem Thi" uniqKey="Nguyen D" first="Diem Thi" last="Nguyen">Diem Thi Nguyen</name></author><author><name sortKey="Bruns, Thomas D" sort="Bruns, Thomas D" uniqKey="Bruns T" first="Thomas D" last="Bruns">Thomas D. Bruns</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2006">2006 May-Jun</date><idno type="RBID">pubmed:17040066</idno><idno type="pmid">17040066</idno><idno type="doi">10.3852/mycologia.98.3.374</idno><idno type="wicri:Area/Main/Corpus">003148</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">003148</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Spatial structure and richness of ectomycorrhizal fungi colonizing bioassay seedlings from resistant propagules in a Sierra Nevada forest: comparisons using two hosts that exhibit different seedling establishment patterns.</title><author><name sortKey="Izzo, Antonio" sort="Izzo, Antonio" uniqKey="Izzo A" first="Antonio" last="Izzo">Antonio Izzo</name><affiliation><nlm:affiliation>Department of Plant and Microbial Biology, 321 Koshland Hall, University of California, Berkeley, California 94720-3102, USA. Izzo@tfrl.ars.usda.gov</nlm:affiliation></affiliation></author><author><name sortKey="Nguyen, Diem Thi" sort="Nguyen, Diem Thi" uniqKey="Nguyen D" first="Diem Thi" last="Nguyen">Diem Thi Nguyen</name></author><author><name sortKey="Bruns, Thomas D" sort="Bruns, Thomas D" uniqKey="Bruns T" first="Thomas D" last="Bruns">Thomas D. Bruns</name></author></analytic><series><title level="j">Mycologia</title><idno type="ISSN">0027-5514</idno></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Abies (growth & development)</term><term>Abies (microbiology)</term><term>Ascomycota (classification)</term><term>Ascomycota (genetics)</term><term>Basidiomycota (classification)</term><term>Basidiomycota (genetics)</term><term>California (MeSH)</term><term>DNA, Ribosomal Spacer (analysis)</term><term>Ecosystem (MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Mycorrhizae (MeSH)</term><term>Pinus (growth & development)</term><term>Plant Roots (microbiology)</term><term>Polymorphism, Restriction Fragment Length (MeSH)</term><term>Seedlings (growth & development)</term><term>Seedlings (microbiology)</term><term>Sequence Analysis, DNA (MeSH)</term><term>Soil Microbiology (MeSH)</term><term>Trees (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>DNA, Ribosomal Spacer</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>California</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Ascomycota</term><term>Basidiomycota</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Ascomycota</term><term>Basidiomycota</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Abies</term><term>Pinus</term><term>Seedlings</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Abies</term><term>Plant Roots</term><term>Seedlings</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Ecosystem</term><term>Molecular Sequence Data</term><term>Mycorrhizae</term><term>Polymorphism, Restriction Fragment Length</term><term>Sequence Analysis, DNA</term><term>Soil Microbiology</term><term>Trees</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">In this study we analyzed the spatial structure of ectomycorrhizal fungi present in the soils as resistant propagules (e.g. spores or sclerotia) in a mixed-conifer forest in the Sierra Nevada, California. Soils were collected under old-growth Abies spp. stands across approximately 1 km and bioassayed with seedlings of hosts that establish best in stronger light (Pinus jeffreyi) or that are shade-tolerant (Abies concolor). Ectomycorrhizal fungi colonizing the roots were characterized with molecular techniques (ITSRFLP and DNA sequence analysis). Wilcoxina, five Rhizopogon species and Cenococcum were the most frequent of 17 detected species. No spatial structure was detected in the resistant propagule community as a whole, but P. jeffreyi seedlings had higher species richness and associated with seven Rhizopogon species that were not detected on A. concolor seedlings. We drew two conclusions from comparisons between this study and a prior study of the ectomycorrhizal community on mature trees in the same forest: (i) the resistant propagule community was considerably simpler and more homogeneous than the active resident community across the forest and (ii) Cenococcum and Wilcoxina species are abundant in both communities.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">17040066</PMID><DateCompleted><Year>2006</Year><Month>12</Month><Day>07</Day></DateCompleted><DateRevised><Year>2019</Year><Month>11</Month><Day>10</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0027-5514</ISSN><JournalIssue CitedMedium="Print"><Volume>98</Volume><Issue>3</Issue><PubDate><MedlineDate>2006 May-Jun</MedlineDate></PubDate></JournalIssue><Title>Mycologia</Title><ISOAbbreviation>Mycologia</ISOAbbreviation></Journal><ArticleTitle>Spatial structure and richness of ectomycorrhizal fungi colonizing bioassay seedlings from resistant propagules in a Sierra Nevada forest: comparisons using two hosts that exhibit different seedling establishment patterns.</ArticleTitle><Pagination><MedlinePgn>374-83</MedlinePgn></Pagination><Abstract><AbstractText>In this study we analyzed the spatial structure of ectomycorrhizal fungi present in the soils as resistant propagules (e.g. spores or sclerotia) in a mixed-conifer forest in the Sierra Nevada, California. Soils were collected under old-growth Abies spp. stands across approximately 1 km and bioassayed with seedlings of hosts that establish best in stronger light (Pinus jeffreyi) or that are shade-tolerant (Abies concolor). Ectomycorrhizal fungi colonizing the roots were characterized with molecular techniques (ITSRFLP and DNA sequence analysis). Wilcoxina, five Rhizopogon species and Cenococcum were the most frequent of 17 detected species. No spatial structure was detected in the resistant propagule community as a whole, but P. jeffreyi seedlings had higher species richness and associated with seven Rhizopogon species that were not detected on A. concolor seedlings. We drew two conclusions from comparisons between this study and a prior study of the ectomycorrhizal community on mature trees in the same forest: (i) the resistant propagule community was considerably simpler and more homogeneous than the active resident community across the forest and (ii) Cenococcum and Wilcoxina species are abundant in both communities.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Izzo</LastName><ForeName>Antonio</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Plant and Microbial Biology, 321 Koshland Hall, University of California, Berkeley, California 94720-3102, USA. Izzo@tfrl.ars.usda.gov</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Nguyen</LastName><ForeName>Diem Thi</ForeName><Initials>DT</Initials></Author><Author ValidYN="Y"><LastName>Bruns</LastName><ForeName>Thomas D</ForeName><Initials>TD</Initials></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>AY587740</AccessionNumber><AccessionNumber>AY587741</AccessionNumber><AccessionNumber>AY587742</AccessionNumber><AccessionNumber>AY587743</AccessionNumber><AccessionNumber>AY587744</AccessionNumber><AccessionNumber>AY587745</AccessionNumber><AccessionNumber>AY587746</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Mycologia</MedlineTA><NlmUniqueID>0400764</NlmUniqueID><ISSNLinking>0027-5514</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D021903">DNA, Ribosomal Spacer</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D028202" MajorTopicYN="N">Abies</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D001203" MajorTopicYN="N">Ascomycota</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D001487" MajorTopicYN="N">Basidiomycota</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002140" MajorTopicYN="N" Type="Geographic">California</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D021903" MajorTopicYN="N">DNA, Ribosomal Spacer</DescriptorName><QualifierName UI="Q000032" MajorTopicYN="N">analysis</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017753" MajorTopicYN="N">Ecosystem</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="Y">Mycorrhizae</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D028223" MajorTopicYN="N">Pinus</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012150" MajorTopicYN="N">Polymorphism, Restriction Fragment Length</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D036226" MajorTopicYN="N">Seedlings</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="N">Soil Microbiology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014197" MajorTopicYN="Y">Trees</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2006</Year><Month>10</Month><Day>17</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2006</Year><Month>12</Month><Day>9</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2006</Year><Month>10</Month><Day>17</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">17040066</ArticleId><ArticleId IdType="doi">10.3852/mycologia.98.3.374</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/MycorrhizaeV1/Data/Main/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 003148 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Corpus/biblio.hfd -nk 003148 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= MycorrhizaeV1
|flux= Main
|étape= Corpus
|type= RBID
|clé= pubmed:17040066
|texte= Spatial structure and richness of ectomycorrhizal fungi colonizing bioassay seedlings from resistant propagules in a Sierra Nevada forest: comparisons using two hosts that exhibit different seedling establishment patterns.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Corpus/RBID.i -Sk "pubmed:17040066" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Corpus/biblio.hfd \
| NlmPubMed2Wicri -a MycorrhizaeV1
| This area was generated with Dilib version V0.6.37. |  |