Gene copy number polymorphisms in an arbuscular mycorrhizal fungal population.
Identifieur interne : 003118 ( Main/Corpus ); précédent : 003117; suivant : 003119Gene copy number polymorphisms in an arbuscular mycorrhizal fungal population.
Auteurs : Nicolas Corradi ; Daniel Croll ; Alexandre Colard ; Gerrit Kuhn ; Martine Ehinger ; Ian R. SandersSource :
- Applied and environmental microbiology [ 0099-2240 ] ; 2007.
English descriptors
- KwdEn :
- Base Sequence (MeSH), Daucus carota (microbiology), Fungi (classification), Fungi (genetics), Fungi (growth & development), Fungi (isolation & purification), Gene Dosage (MeSH), Genes, rRNA (MeSH), Molecular Sequence Data (MeSH), Mycorrhizae (MeSH), Plant Roots (microbiology), Polymerase Chain Reaction (methods), Polymorphism, Genetic (MeSH), Pseudogenes (genetics), RNA, Ribosomal (genetics).
- MESH :
- chemical , genetics : RNA, Ribosomal.
- classification : Fungi.
- genetics : Fungi, Pseudogenes.
- growth & development : Fungi.
- isolation & purification : Fungi.
- methods : Polymerase Chain Reaction.
- microbiology : Daucus carota, Plant Roots.
- Base Sequence, Gene Dosage, Genes, rRNA, Molecular Sequence Data, Mycorrhizae, Polymorphism, Genetic.
Abstract
Gene copy number polymorphism was studied in a population of the arbuscular mycorrhizal fungus Glomus intraradices by using a quantitative PCR approach on four different genomic regions. Variation in gene copy number was found for a pseudogene and for three ribosomal genes, providing conclusive evidence for a widespread occurrence of macromutational events in the population.
DOI: 10.1128/AEM.01574-06
PubMed: 17085714
PubMed Central: PMC1797111
Links to Exploration step
pubmed:17085714Le document en format XML
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Sanders</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2007">2007</date><idno type="RBID">pubmed:17085714</idno><idno type="pmid">17085714</idno><idno type="doi">10.1128/AEM.01574-06</idno><idno type="pmc">PMC1797111</idno><idno type="wicri:Area/Main/Corpus">003118</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">003118</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Gene copy number polymorphisms in an arbuscular mycorrhizal fungal population.</title><author><name sortKey="Corradi, Nicolas" sort="Corradi, Nicolas" uniqKey="Corradi N" first="Nicolas" last="Corradi">Nicolas Corradi</name><affiliation><nlm:affiliation>Department of Ecology and Evolution, Biophore, University of Lausanne, 1015 Lausanne, Switzerland.</nlm:affiliation></affiliation></author><author><name sortKey="Croll, Daniel" sort="Croll, Daniel" uniqKey="Croll D" first="Daniel" last="Croll">Daniel Croll</name></author><author><name sortKey="Colard, Alexandre" sort="Colard, Alexandre" uniqKey="Colard A" first="Alexandre" last="Colard">Alexandre Colard</name></author><author><name sortKey="Kuhn, Gerrit" sort="Kuhn, Gerrit" uniqKey="Kuhn G" first="Gerrit" last="Kuhn">Gerrit Kuhn</name></author><author><name sortKey="Ehinger, Martine" sort="Ehinger, Martine" uniqKey="Ehinger M" first="Martine" last="Ehinger">Martine Ehinger</name></author><author><name sortKey="Sanders, Ian R" sort="Sanders, Ian R" uniqKey="Sanders I" first="Ian R" last="Sanders">Ian R. Sanders</name></author></analytic><series><title level="j">Applied and environmental microbiology</title><idno type="ISSN">0099-2240</idno><imprint><date when="2007" type="published">2007</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Base Sequence (MeSH)</term><term>Daucus carota (microbiology)</term><term>Fungi (classification)</term><term>Fungi (genetics)</term><term>Fungi (growth & development)</term><term>Fungi (isolation & purification)</term><term>Gene Dosage (MeSH)</term><term>Genes, rRNA (MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Mycorrhizae (MeSH)</term><term>Plant Roots (microbiology)</term><term>Polymerase Chain Reaction (methods)</term><term>Polymorphism, Genetic (MeSH)</term><term>Pseudogenes (genetics)</term><term>RNA, Ribosomal (genetics)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Ribosomal</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Fungi</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Fungi</term><term>Pseudogenes</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Fungi</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Fungi</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Polymerase Chain Reaction</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Daucus carota</term><term>Plant Roots</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Base Sequence</term><term>Gene Dosage</term><term>Genes, rRNA</term><term>Molecular Sequence Data</term><term>Mycorrhizae</term><term>Polymorphism, Genetic</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Gene copy number polymorphism was studied in a population of the arbuscular mycorrhizal fungus Glomus intraradices by using a quantitative PCR approach on four different genomic regions. Variation in gene copy number was found for a pseudogene and for three ribosomal genes, providing conclusive evidence for a widespread occurrence of macromutational events in the population.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">17085714</PMID><DateCompleted><Year>2007</Year><Month>05</Month><Day>25</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0099-2240</ISSN><JournalIssue CitedMedium="Print"><Volume>73</Volume><Issue>1</Issue><PubDate><Year>2007</Year><Month>Jan</Month></PubDate></JournalIssue><Title>Applied and environmental microbiology</Title><ISOAbbreviation>Appl Environ Microbiol</ISOAbbreviation></Journal><ArticleTitle>Gene copy number polymorphisms in an arbuscular mycorrhizal fungal population.</ArticleTitle><Pagination><MedlinePgn>366-9</MedlinePgn></Pagination><Abstract><AbstractText>Gene copy number polymorphism was studied in a population of the arbuscular mycorrhizal fungus Glomus intraradices by using a quantitative PCR approach on four different genomic regions. Variation in gene copy number was found for a pseudogene and for three ribosomal genes, providing conclusive evidence for a widespread occurrence of macromutational events in the population.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Corradi</LastName><ForeName>Nicolas</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Department of Ecology and Evolution, Biophore, University of Lausanne, 1015 Lausanne, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Croll</LastName><ForeName>Daniel</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Colard</LastName><ForeName>Alexandre</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Kuhn</LastName><ForeName>Gerrit</ForeName><Initials>G</Initials></Author><Author ValidYN="Y"><LastName>Ehinger</LastName><ForeName>Martine</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Sanders</LastName><ForeName>Ian 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IdType="pubmed">12721631</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2004 Feb;41(2):253-61</Citation><ArticleIdList><ArticleId IdType="pubmed">14732270</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2004 Feb 24;101(8):2369-74</Citation><ArticleIdList><ArticleId IdType="pubmed">14983016</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2004 Jul 23;305(5683):525-8</Citation><ArticleIdList><ArticleId IdType="pubmed">15273396</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2004 Sep;36(9):949-51</Citation><ArticleIdList><ArticleId IdType="pubmed">15286789</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 1982 Feb 18;295(5850):564-8</Citation><ArticleIdList><ArticleId IdType="pubmed">6799840</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 1985 Jul;2(4):338-46</Citation><ArticleIdList><ArticleId IdType="pubmed">3870866</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 1990 Nov;87(22):8741-5</Citation><ArticleIdList><ArticleId IdType="pubmed">2247443</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2005 Mar 4;307(5714):1434-40</Citation><ArticleIdList><ArticleId IdType="pubmed">15637236</ArticleId></ArticleIdList></Reference><Reference><Citation>Genes Dev. 2005 May 15;19(10):1199-210</Citation><ArticleIdList><ArticleId IdType="pubmed">15905408</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2006 Feb 16;439(7078):851-5</Citation><ArticleIdList><ArticleId IdType="pubmed">16482158</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Evol Biol. 2006;6:21</Citation><ArticleIdList><ArticleId IdType="pubmed">16529655</ArticleId></ArticleIdList></Reference><Reference><Citation>Ecol Lett. 2006 Feb;9(2):103-10</Citation><ArticleIdList><ArticleId 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