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Polygonum viviparum mycobionts on an alpine primary successional glacier forefront.

Identifieur interne : 002D88 ( Main/Corpus ); précédent : 002D87; suivant : 002D89

Polygonum viviparum mycobionts on an alpine primary successional glacier forefront.

Auteurs : Oliver Mühlmann ; Margit Bacher ; Ursula Peintner

Source :

RBID : pubmed:18064497

English descriptors

Abstract

Polygonum viviparum is one of the first ectomycorrhizal (EM) plant species colonising primary successional sites at the Rotmoos glacier forefront (Tyrolean Alps, Austria). On a site with soil development of about 150 years (2,400 m above sea level), mycobionts of P. viviparum were identified by morphotyping and fungal ribosomal deoxyribonucleic acid internal transcribed spacer sequencing. For studying seasonal dynamics and spatial heterogeneity, ectomycorrhizae were sampled on five plots during all seasons. P. viviparum root tips were always EM. In total, 18 mycobiont taxa of the following genera were identified: Cenococcum (1), Cortinarius (2), Helvella (1), Inocybe (3), Russula (1), Sebacina (2), Thelephora (2) and Tomentella (6). All were non-specific EM partners of EM plants. As early as 2 weeks after spring snow melt, EM were well developed, vital and showed high mycobiont diversity. The relative abundance of senescent root tips was lowest in spring and increased throughout the year, with a maximum in winter (frozen soil). Thus, mycobiont growth and physiological activity obviously start when soil is still under snow cover: We speculate that water availability is one important initiation factor for mycorrhizal development under snow cover, when temperatures still range around the freezing point. Irrespectively of the season, most abundant mycobionts at this primary successional site belonged to the genera Tomentella, Sebacina and Cenococcum, also in frozen soil. Spatial heterogeneity was high when considering species composition and diversity indices. Overall mycobionts species richness was restricted at this site, probably because of the limited availability of fungal partners. We regard the presence/absence of fungal partner and limiting abiotic impacts of the environment as key factors for the symbiotic status of P. viviparum.

DOI: 10.1007/s00572-007-0156-z
PubMed: 18064497

Links to Exploration step

pubmed:18064497

Le document en format XML

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<div type="abstract" xml:lang="en">Polygonum viviparum is one of the first ectomycorrhizal (EM) plant species colonising primary successional sites at the Rotmoos glacier forefront (Tyrolean Alps, Austria). On a site with soil development of about 150 years (2,400 m above sea level), mycobionts of P. viviparum were identified by morphotyping and fungal ribosomal deoxyribonucleic acid internal transcribed spacer sequencing. For studying seasonal dynamics and spatial heterogeneity, ectomycorrhizae were sampled on five plots during all seasons. P. viviparum root tips were always EM. In total, 18 mycobiont taxa of the following genera were identified: Cenococcum (1), Cortinarius (2), Helvella (1), Inocybe (3), Russula (1), Sebacina (2), Thelephora (2) and Tomentella (6). All were non-specific EM partners of EM plants. As early as 2 weeks after spring snow melt, EM were well developed, vital and showed high mycobiont diversity. The relative abundance of senescent root tips was lowest in spring and increased throughout the year, with a maximum in winter (frozen soil). Thus, mycobiont growth and physiological activity obviously start when soil is still under snow cover: We speculate that water availability is one important initiation factor for mycorrhizal development under snow cover, when temperatures still range around the freezing point. Irrespectively of the season, most abundant mycobionts at this primary successional site belonged to the genera Tomentella, Sebacina and Cenococcum, also in frozen soil. Spatial heterogeneity was high when considering species composition and diversity indices. Overall mycobionts species richness was restricted at this site, probably because of the limited availability of fungal partners. We regard the presence/absence of fungal partner and limiting abiotic impacts of the environment as key factors for the symbiotic status of P. viviparum.</div>
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<Citation>Mycorrhiza. 2002 Feb;12(1):43-9</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">11968946</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>New Phytol. 2006;171(1):187-97</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16771994</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Mycol Res. 2006 Jun;110(Pt 6):734-48</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16769208</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>New Phytol. 2005 Jun;166(3):1063-8</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15869663</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Mycorrhiza. 2006 Jul;16(5):299-363</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16845554</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Oecologia. 1980 Apr;45(1):57-62</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">28310937</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>New Phytol. 2005 Jun;166(3):1011-23</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15869659</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Res Microbiol. 2005 Aug;156(7):775-84</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15922566</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>FEMS Microbiol Ecol. 2005 Jun 1;53(1):27-32</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16329926</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Mycologia. 2006 May-Jun;98(3):468-78</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">17040076</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Am J Bot. 2001 Dec;88(12):2168-79</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">21669649</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Mycorrhiza. 2002 Jun;12(3):117-23</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">12072981</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
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