Community structure of arbuscular mycorrhizal fungi associated to Veronica rechingeri at the Anguran zinc and lead mining region.
Identifieur interne : 002C94 ( Main/Corpus ); précédent : 002C93; suivant : 002C95Community structure of arbuscular mycorrhizal fungi associated to Veronica rechingeri at the Anguran zinc and lead mining region.
Auteurs : M. Zarei ; S. König ; S. Hempel ; M Khayam Nekouei ; Gh Savaghebi ; F. BuscotSource :
- Environmental pollution (Barking, Essex : 1987) [ 1873-6424 ] ; 2008.
English descriptors
- KwdEn :
- Biodiversity (MeSH), DNA, Fungal (analysis), Fungi (genetics), Fungi (isolation & purification), Iran (MeSH), Lead (MeSH), Mining (MeSH), Mycorrhizae (genetics), Mycorrhizae (isolation & purification), Plant Roots (microbiology), Polymorphism, Restriction Fragment Length (MeSH), Soil Microbiology (MeSH), Soil Pollutants (toxicity), Spores, Fungal (MeSH), Veronica (microbiology), Zinc (MeSH).
- MESH :
- chemical , analysis : DNA, Fungal.
- chemical , toxicity : Soil Pollutants.
- geographic : Iran, Lead, Zinc.
- genetics : Fungi, Mycorrhizae.
- isolation & purification : Fungi, Mycorrhizae.
- microbiology : Plant Roots, Veronica.
- Biodiversity, Mining, Polymorphism, Restriction Fragment Length, Soil Microbiology, Spores, Fungal.
Abstract
Root colonization and diversity of arbuscular mycorrhizal fungi (AMF) were analyzed in Veronica rechingeri growing in heavy metal (HM) and non-polluted soils of the Anguran Zn and Pb mining region (Iran). Three species could be separated morphologically, while phylogenetic analyses after PCR amplification of the ITS region followed by RFLP and sequencing revealed seven different AMF sequence types all within the genus Glomus. Rarefaction analysis confirmed exhaustive molecular characterization of the AMF diversity present within root samples. Increasing heavy metal contamination between the sites studied was accompanied by a decrease in AMF spore numbers, mycorrhizal colonization parameters and the number of AMF sequence types colonizing the roots. Some AMF sequence types were only found at sites with the highest and lowest soil HM contents, respectively.
DOI: 10.1016/j.envpol.2008.03.006
PubMed: 18439736
Links to Exploration step
pubmed:18439736Le document en format XML
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Hempel</name></author><author><name sortKey="Nekouei, M Khayam" sort="Nekouei, M Khayam" uniqKey="Nekouei M" first="M Khayam" last="Nekouei">M Khayam Nekouei</name></author><author><name sortKey="Savaghebi, Gh" sort="Savaghebi, Gh" uniqKey="Savaghebi G" first="Gh" last="Savaghebi">Gh Savaghebi</name></author><author><name sortKey="Buscot, F" sort="Buscot, F" uniqKey="Buscot F" first="F" last="Buscot">F. 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Zarei</name><affiliation><nlm:affiliation>Department of Soil Science Engineering, Soil and Water Engineering Faculty, University College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran. mehdizarei20@yahoo.ca</nlm:affiliation></affiliation></author><author><name sortKey="Konig, S" sort="Konig, S" uniqKey="Konig S" first="S" last="König">S. König</name></author><author><name sortKey="Hempel, S" sort="Hempel, S" uniqKey="Hempel S" first="S" last="Hempel">S. Hempel</name></author><author><name sortKey="Nekouei, M Khayam" sort="Nekouei, M Khayam" uniqKey="Nekouei M" first="M Khayam" last="Nekouei">M Khayam Nekouei</name></author><author><name sortKey="Savaghebi, Gh" sort="Savaghebi, Gh" uniqKey="Savaghebi G" first="Gh" last="Savaghebi">Gh Savaghebi</name></author><author><name sortKey="Buscot, F" sort="Buscot, F" uniqKey="Buscot F" first="F" last="Buscot">F. Buscot</name></author></analytic><series><title level="j">Environmental pollution (Barking, Essex : 1987)</title><idno type="eISSN">1873-6424</idno><imprint><date when="2008" type="published">2008</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Biodiversity (MeSH)</term><term>DNA, Fungal (analysis)</term><term>Fungi (genetics)</term><term>Fungi (isolation & purification)</term><term>Iran (MeSH)</term><term>Lead (MeSH)</term><term>Mining (MeSH)</term><term>Mycorrhizae (genetics)</term><term>Mycorrhizae (isolation & purification)</term><term>Plant Roots (microbiology)</term><term>Polymorphism, Restriction Fragment Length (MeSH)</term><term>Soil Microbiology (MeSH)</term><term>Soil Pollutants (toxicity)</term><term>Spores, Fungal (MeSH)</term><term>Veronica (microbiology)</term><term>Zinc (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>DNA, Fungal</term></keywords><keywords scheme="MESH" type="chemical" qualifier="toxicity" xml:lang="en"><term>Soil Pollutants</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Iran</term><term>Lead</term><term>Zinc</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Fungi</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Fungi</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Roots</term><term>Veronica</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Biodiversity</term><term>Mining</term><term>Polymorphism, Restriction Fragment Length</term><term>Soil Microbiology</term><term>Spores, Fungal</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Root colonization and diversity of arbuscular mycorrhizal fungi (AMF) were analyzed in Veronica rechingeri growing in heavy metal (HM) and non-polluted soils of the Anguran Zn and Pb mining region (Iran). Three species could be separated morphologically, while phylogenetic analyses after PCR amplification of the ITS region followed by RFLP and sequencing revealed seven different AMF sequence types all within the genus Glomus. Rarefaction analysis confirmed exhaustive molecular characterization of the AMF diversity present within root samples. Increasing heavy metal contamination between the sites studied was accompanied by a decrease in AMF spore numbers, mycorrhizal colonization parameters and the number of AMF sequence types colonizing the roots. Some AMF sequence types were only found at sites with the highest and lowest soil HM contents, respectively.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">18439736</PMID><DateCompleted><Year>2009</Year><Month>01</Month><Day>14</Day></DateCompleted><DateRevised><Year>2013</Year><Month>11</Month><Day>21</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1873-6424</ISSN><JournalIssue CitedMedium="Internet"><Volume>156</Volume><Issue>3</Issue><PubDate><Year>2008</Year><Month>Dec</Month></PubDate></JournalIssue><Title>Environmental pollution (Barking, Essex : 1987)</Title><ISOAbbreviation>Environ Pollut</ISOAbbreviation></Journal><ArticleTitle>Community structure of arbuscular mycorrhizal fungi associated to Veronica rechingeri at the Anguran zinc and lead mining region.</ArticleTitle><Pagination><MedlinePgn>1277-83</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.envpol.2008.03.006</ELocationID><Abstract><AbstractText>Root colonization and diversity of arbuscular mycorrhizal fungi (AMF) were analyzed in Veronica rechingeri growing in heavy metal (HM) and non-polluted soils of the Anguran Zn and Pb mining region (Iran). Three species could be separated morphologically, while phylogenetic analyses after PCR amplification of the ITS region followed by RFLP and sequencing revealed seven different AMF sequence types all within the genus Glomus. Rarefaction analysis confirmed exhaustive molecular characterization of the AMF diversity present within root samples. Increasing heavy metal contamination between the sites studied was accompanied by a decrease in AMF spore numbers, mycorrhizal colonization parameters and the number of AMF sequence types colonizing the roots. Some AMF sequence types were only found at sites with the highest and lowest soil HM contents, respectively.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zarei</LastName><ForeName>M</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Soil Science Engineering, Soil and Water Engineering Faculty, University College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran. mehdizarei20@yahoo.ca</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>König</LastName><ForeName>S</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Hempel</LastName><ForeName>S</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Nekouei</LastName><ForeName>M Khayam</ForeName><Initials>MK</Initials></Author><Author ValidYN="Y"><LastName>Savaghebi</LastName><ForeName>Gh</ForeName><Initials>G</Initials></Author><Author ValidYN="Y"><LastName>Buscot</LastName><ForeName>F</ForeName><Initials>F</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2008</Year><Month>04</Month><Day>25</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Environ Pollut</MedlineTA><NlmUniqueID>8804476</NlmUniqueID><ISSNLinking>0269-7491</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004271">DNA, Fungal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012989">Soil Pollutants</NameOfSubstance></Chemical><Chemical><RegistryNumber>2P299V784P</RegistryNumber><NameOfSubstance 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MajorTopicYN="Y">Mining</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012150" MajorTopicYN="N">Polymorphism, Restriction Fragment Length</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="N">Soil Microbiology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012989" MajorTopicYN="N">Soil Pollutants</DescriptorName><QualifierName UI="Q000633" MajorTopicYN="N">toxicity</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013172" MajorTopicYN="N">Spores, 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