Distribution of ectomycorrhizal and pathogenic fungi in soil along a vegetational change from Japanese black pine (Pinus thunbergii) to black locust (Robinia pseudoacacia).
Identifieur interne : 002B31 ( Main/Corpus ); précédent : 002B30; suivant : 002B32Distribution of ectomycorrhizal and pathogenic fungi in soil along a vegetational change from Japanese black pine (Pinus thunbergii) to black locust (Robinia pseudoacacia).
Auteurs : Takeshi Taniguchi ; Ryota Kataoka ; Shigenobu Tamai ; Norikazu Yamanaka ; Kazuyoshi FutaiSource :
- Mycorrhiza [ 1432-1890 ] ; 2009.
English descriptors
- KwdEn :
- DNA, Ribosomal Spacer (genetics), Electrophoresis, Polyacrylamide Gel (MeSH), Fungi (genetics), Fungi (isolation & purification), Fungi (physiology), Hydrogen-Ion Concentration (MeSH), Molecular Sequence Data (MeSH), Mycorrhizae (genetics), Mycorrhizae (isolation & purification), Mycorrhizae (physiology), Nitrogen (analysis), Phosphates (analysis), Pinus (microbiology), Robinia (microbiology), Soil (analysis), Soil Microbiology (MeSH).
- MESH :
- chemical , analysis : Nitrogen, Phosphates, Soil.
- chemical , genetics : DNA, Ribosomal Spacer.
- genetics : Fungi, Mycorrhizae.
- isolation & purification : Fungi, Mycorrhizae.
- microbiology : Pinus, Robinia.
- physiology : Fungi, Mycorrhizae.
- Electrophoresis, Polyacrylamide Gel, Hydrogen-Ion Concentration, Molecular Sequence Data, Soil Microbiology.
Abstract
The nitrogen-fixing tree black locust (Robinia pseudoacacia L.) seems to affect ectomycorrhizal (ECM) colonization and disease severity of Japanese black pine (Pinus thunbergii Parl.) seedlings. We examined the effect of black locust on the distribution of ECM and pathogenic fungi in soil. DNA was extracted from soil at depths of 0-5 and 5-10 cm, collected from the border between a Japanese black pine- and a black locust-dominated forest, and the distribution of these fungi was investigated by denaturing gradient gel electrophoresis. The effect of soil nutrition and pH on fungal distribution was also examined. Tomentella sp. 1 and Tomentella sp. 2 were not detected from some subplots in the Japanese black pine-dominated forest. Ectomycorrhizas formed by Tomentella spp. were dominant in black locust-dominated subplots and very little in the Japanese black pine-dominated forest. Therefore, the distribution may be influenced by the distribution of inoculum potential, although we could not detect significant relationships between the distribution of Tomentella spp. on pine seedlings and in soils. The other ECM fungi were detected in soils in subplots where the ECM fungi was not detected on pine seedlings, and there was no significant correlation between the distribution of the ECM fungi on pine seedlings and in soils. Therefore, inoculum potential seemed to not always influence the ECM community on roots. The distribution of Lactarius quieticolor and Tomentella sp. 2 in soil at a depth of 0-5 cm positively correlated with soil phosphate (soil P) and that of Tomentella sp. 2 also positively correlated with soil nitrogen (soil N). These results suggest the possibility that the distribution of inoculum potential of the ECM fungi was affected by soil N and soil P. Although the mortality of the pine seedlings was higher in the black locust-dominated area than in the Japanese black pine-dominated area, a pathogenic fungus of pine seedlings, Cylindrocladium pacificum, was detected in soil at depths of 0-5 and 5-10 cm from both these areas. This indicates that the disease severity of pine seedlings in this study was influenced by environmental conditions rather than the distribution of inoculum potential.
DOI: 10.1007/s00572-008-0212-3
PubMed: 19015894
Links to Exploration step
pubmed:19015894Le document en format XML
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Japan.</nlm:affiliation></affiliation></author><author><name sortKey="Tamai, Shigenobu" sort="Tamai, Shigenobu" uniqKey="Tamai S" first="Shigenobu" last="Tamai">Shigenobu Tamai</name><affiliation><nlm:affiliation>Revegetation and Grassland Development, Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan.</nlm:affiliation></affiliation></author><author><name sortKey="Yamanaka, Norikazu" sort="Yamanaka, Norikazu" uniqKey="Yamanaka N" first="Norikazu" last="Yamanaka">Norikazu Yamanaka</name><affiliation><nlm:affiliation>Revegetation and Grassland Development, Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan.</nlm:affiliation></affiliation></author><author><name sortKey="Futai, Kazuyoshi" sort="Futai, Kazuyoshi" uniqKey="Futai K" first="Kazuyoshi" last="Futai">Kazuyoshi Futai</name><affiliation><nlm:affiliation>Laboratory of Environmental Mycoscience, Division of Environmental Science and Technology, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2009">2009</date><idno type="RBID">pubmed:19015894</idno><idno type="pmid">19015894</idno><idno type="doi">10.1007/s00572-008-0212-3</idno><idno type="wicri:Area/Main/Corpus">002B31</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">002B31</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Distribution of ectomycorrhizal and pathogenic fungi in soil along a vegetational change from Japanese black pine (Pinus thunbergii) to black locust (Robinia pseudoacacia).</title><author><name sortKey="Taniguchi, Takeshi" sort="Taniguchi, Takeshi" uniqKey="Taniguchi T" first="Takeshi" last="Taniguchi">Takeshi Taniguchi</name><affiliation><nlm:affiliation>Laboratory of Environmental Mycoscience, Division of Environmental Science and Technology, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan. tanitake@hotmail.co.jp.</nlm:affiliation></affiliation></author><author><name sortKey="Kataoka, Ryota" sort="Kataoka, Ryota" uniqKey="Kataoka R" first="Ryota" last="Kataoka">Ryota Kataoka</name><affiliation><nlm:affiliation>Laboratory of Environmental Mycoscience, Division of Environmental Science and Technology, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan.</nlm:affiliation></affiliation></author><author><name sortKey="Tamai, Shigenobu" sort="Tamai, Shigenobu" uniqKey="Tamai S" first="Shigenobu" last="Tamai">Shigenobu Tamai</name><affiliation><nlm:affiliation>Revegetation and Grassland Development, Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan.</nlm:affiliation></affiliation></author><author><name sortKey="Yamanaka, Norikazu" sort="Yamanaka, Norikazu" uniqKey="Yamanaka N" first="Norikazu" last="Yamanaka">Norikazu Yamanaka</name><affiliation><nlm:affiliation>Revegetation and Grassland Development, Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan.</nlm:affiliation></affiliation></author><author><name sortKey="Futai, Kazuyoshi" sort="Futai, Kazuyoshi" uniqKey="Futai K" first="Kazuyoshi" last="Futai">Kazuyoshi Futai</name><affiliation><nlm:affiliation>Laboratory of Environmental Mycoscience, Division of Environmental Science and Technology, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Mycorrhiza</title><idno type="eISSN">1432-1890</idno><imprint><date when="2009" type="published">2009</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>DNA, Ribosomal Spacer (genetics)</term><term>Electrophoresis, Polyacrylamide Gel (MeSH)</term><term>Fungi (genetics)</term><term>Fungi (isolation & purification)</term><term>Fungi (physiology)</term><term>Hydrogen-Ion Concentration (MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Mycorrhizae (genetics)</term><term>Mycorrhizae (isolation & purification)</term><term>Mycorrhizae (physiology)</term><term>Nitrogen (analysis)</term><term>Phosphates (analysis)</term><term>Pinus (microbiology)</term><term>Robinia (microbiology)</term><term>Soil (analysis)</term><term>Soil Microbiology (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>Nitrogen</term><term>Phosphates</term><term>Soil</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Ribosomal Spacer</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Fungi</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Fungi</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Pinus</term><term>Robinia</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Fungi</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Electrophoresis, Polyacrylamide Gel</term><term>Hydrogen-Ion Concentration</term><term>Molecular Sequence Data</term><term>Soil Microbiology</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The nitrogen-fixing tree black locust (Robinia pseudoacacia L.) seems to affect ectomycorrhizal (ECM) colonization and disease severity of Japanese black pine (Pinus thunbergii Parl.) seedlings. We examined the effect of black locust on the distribution of ECM and pathogenic fungi in soil. DNA was extracted from soil at depths of 0-5 and 5-10 cm, collected from the border between a Japanese black pine- and a black locust-dominated forest, and the distribution of these fungi was investigated by denaturing gradient gel electrophoresis. The effect of soil nutrition and pH on fungal distribution was also examined. Tomentella sp. 1 and Tomentella sp. 2 were not detected from some subplots in the Japanese black pine-dominated forest. Ectomycorrhizas formed by Tomentella spp. were dominant in black locust-dominated subplots and very little in the Japanese black pine-dominated forest. Therefore, the distribution may be influenced by the distribution of inoculum potential, although we could not detect significant relationships between the distribution of Tomentella spp. on pine seedlings and in soils. The other ECM fungi were detected in soils in subplots where the ECM fungi was not detected on pine seedlings, and there was no significant correlation between the distribution of the ECM fungi on pine seedlings and in soils. Therefore, inoculum potential seemed to not always influence the ECM community on roots. The distribution of Lactarius quieticolor and Tomentella sp. 2 in soil at a depth of 0-5 cm positively correlated with soil phosphate (soil P) and that of Tomentella sp. 2 also positively correlated with soil nitrogen (soil N). These results suggest the possibility that the distribution of inoculum potential of the ECM fungi was affected by soil N and soil P. Although the mortality of the pine seedlings was higher in the black locust-dominated area than in the Japanese black pine-dominated area, a pathogenic fungus of pine seedlings, Cylindrocladium pacificum, was detected in soil at depths of 0-5 and 5-10 cm from both these areas. This indicates that the disease severity of pine seedlings in this study was influenced by environmental conditions rather than the distribution of inoculum potential.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">19015894</PMID><DateCompleted><Year>2009</Year><Month>06</Month><Day>15</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-1890</ISSN><JournalIssue CitedMedium="Internet"><Volume>19</Volume><Issue>4</Issue><PubDate><Year>2009</Year><Month>Apr</Month></PubDate></JournalIssue><Title>Mycorrhiza</Title><ISOAbbreviation>Mycorrhiza</ISOAbbreviation></Journal><ArticleTitle>Distribution of ectomycorrhizal and pathogenic fungi in soil along a vegetational change from Japanese black pine (Pinus thunbergii) to black locust (Robinia pseudoacacia).</ArticleTitle><Pagination><MedlinePgn>231-238</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00572-008-0212-3</ELocationID><Abstract><AbstractText>The nitrogen-fixing tree black locust (Robinia pseudoacacia L.) seems to affect ectomycorrhizal (ECM) colonization and disease severity of Japanese black pine (Pinus thunbergii Parl.) seedlings. We examined the effect of black locust on the distribution of ECM and pathogenic fungi in soil. DNA was extracted from soil at depths of 0-5 and 5-10 cm, collected from the border between a Japanese black pine- and a black locust-dominated forest, and the distribution of these fungi was investigated by denaturing gradient gel electrophoresis. The effect of soil nutrition and pH on fungal distribution was also examined. Tomentella sp. 1 and Tomentella sp. 2 were not detected from some subplots in the Japanese black pine-dominated forest. Ectomycorrhizas formed by Tomentella spp. were dominant in black locust-dominated subplots and very little in the Japanese black pine-dominated forest. Therefore, the distribution may be influenced by the distribution of inoculum potential, although we could not detect significant relationships between the distribution of Tomentella spp. on pine seedlings and in soils. The other ECM fungi were detected in soils in subplots where the ECM fungi was not detected on pine seedlings, and there was no significant correlation between the distribution of the ECM fungi on pine seedlings and in soils. Therefore, inoculum potential seemed to not always influence the ECM community on roots. The distribution of Lactarius quieticolor and Tomentella sp. 2 in soil at a depth of 0-5 cm positively correlated with soil phosphate (soil P) and that of Tomentella sp. 2 also positively correlated with soil nitrogen (soil N). These results suggest the possibility that the distribution of inoculum potential of the ECM fungi was affected by soil N and soil P. Although the mortality of the pine seedlings was higher in the black locust-dominated area than in the Japanese black pine-dominated area, a pathogenic fungus of pine seedlings, Cylindrocladium pacificum, was detected in soil at depths of 0-5 and 5-10 cm from both these areas. This indicates that the disease severity of pine seedlings in this study was influenced by environmental conditions rather than the distribution of inoculum potential.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Taniguchi</LastName><ForeName>Takeshi</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Laboratory of Environmental Mycoscience, Division of Environmental Science and Technology, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan. tanitake@hotmail.co.jp.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kataoka</LastName><ForeName>Ryota</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Laboratory of Environmental Mycoscience, Division of Environmental Science and Technology, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tamai</LastName><ForeName>Shigenobu</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Revegetation and Grassland Development, Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yamanaka</LastName><ForeName>Norikazu</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Revegetation and Grassland Development, Arid Land Research Center, Tottori University, Tottori, 680-0001, Japan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Futai</LastName><ForeName>Kazuyoshi</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Laboratory of Environmental Mycoscience, Division of Environmental Science and Technology, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><DataBankList 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Microbiology</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2008</Year><Month>07</Month><Day>16</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2008</Year><Month>11</Month><Day>04</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2008</Year><Month>11</Month><Day>19</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2009</Year><Month>6</Month><Day>16</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2008</Year><Month>11</Month><Day>19</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">19015894</ArticleId><ArticleId IdType="doi">10.1007/s00572-008-0212-3</ArticleId><ArticleId IdType="pii">10.1007/s00572-008-0212-3</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>New Phytol. 2005 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