Understanding plant-microbe interactions for phytoremediation of petroleum-polluted soil.
Identifieur interne : 002370 ( Main/Corpus ); précédent : 002369; suivant : 002371Understanding plant-microbe interactions for phytoremediation of petroleum-polluted soil.
Auteurs : Ming Nie ; Yijing Wang ; Jiayi Yu ; Ming Xiao ; Lifen Jiang ; Ji Yang ; Changming Fang ; Jiakuan Chen ; Bo LiSource :
- PloS one [ 1932-6203 ] ; 2011.
English descriptors
- KwdEn :
- Bacteria (genetics), Biodegradation, Environmental (MeSH), China (MeSH), Colony Count, Microbial (MeSH), Genes, Bacterial (genetics), Host-Pathogen Interactions (physiology), Mycorrhizae (growth & development), Petroleum (analysis), Petroleum (microbiology), Plant Development (MeSH), Plants (metabolism), Plants (microbiology), Quantitative Trait, Heritable (MeSH), Regression Analysis (MeSH), Soil Microbiology (MeSH), Soil Pollutants (isolation & purification).
- MESH :
- chemical , analysis : Petroleum.
- chemical , isolation & purification : Soil Pollutants.
- chemical , microbiology : Petroleum.
- geographic : China.
- genetics : Bacteria, Genes, Bacterial.
- growth & development : Mycorrhizae.
- metabolism : Plants.
- microbiology : Plants.
- physiology : Host-Pathogen Interactions.
- Biodegradation, Environmental, Colony Count, Microbial, Plant Development, Quantitative Trait, Heritable, Regression Analysis, Soil Microbiology.
Abstract
Plant-microbe interactions are considered to be important processes determining the efficiency of phytoremediation of petroleum pollution, however relatively little is known about how these interactions are influenced by petroleum pollution. In this experimental study using a microcosm approach, we examined how plant ecophysiological traits, soil nutrients and microbial activities were influenced by petroleum pollution in Phragmites australis, a phytoremediating species. Generally, petroleum pollution reduced plant performance, especially at early stages of plant growth. Petroleum had negative effects on the net accumulation of inorganic nitrogen from its organic forms (net nitrogen mineralization (NNM)) most likely by decreasing the inorganic nitrogen available to the plants in petroleum-polluted soils. However, abundant dissolved organic nitrogen (DON) was found in petroleum-polluted soil. In order to overcome initial deficiency of inorganic nitrogen, plants by dint of high colonization of arbuscular mycorrhizal fungi might absorb some DON for their growth in petroleum-polluted soils. In addition, through using a real-time polymerase chain reaction method, we quantified hydrocarbon-degrading bacterial traits based on their catabolic genes (i.e. alkB (alkane monooxygenase), nah (naphthalene dioxygenase) and tol (xylene monooxygenase) genes). This enumeration of target genes suggests that different hydrocarbon-degrading bacteria experienced different dynamic changes during phytoremediation and a greater abundance of alkB was detected during vegetative growth stages. Because phytoremediation of different components of petroleum is performed by different hydrocarbon-degrading bacteria, plants' ability of phytoremediating different components might therefore vary during the plant life cycle. Phytoremediation might be most effective during the vegetative growth stages as greater abundances of hydrocarbon-degrading bacteria containing alkB and tol genes were observed at these stages. The information provided by this study enhances our understanding of the effects of petroleum pollution on plant-microbe interactions and the roles of these interactions in the phytoremediation of petroleum-polluted soil.
DOI: 10.1371/journal.pone.0017961
PubMed: 21437257
PubMed Central: PMC3060916
Links to Exploration step
pubmed:21437257Le document en format XML
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L" first="Lifen" last="Jiang">Lifen Jiang</name></author><author><name sortKey="Yang, Ji" sort="Yang, Ji" uniqKey="Yang J" first="Ji" last="Yang">Ji Yang</name></author><author><name sortKey="Fang, Changming" sort="Fang, Changming" uniqKey="Fang C" first="Changming" last="Fang">Changming Fang</name></author><author><name sortKey="Chen, Jiakuan" sort="Chen, Jiakuan" uniqKey="Chen J" first="Jiakuan" last="Chen">Jiakuan Chen</name></author><author><name sortKey="Li, Bo" sort="Li, Bo" uniqKey="Li B" first="Bo" last="Li">Bo Li</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2011">2011</date><idno type="RBID">pubmed:21437257</idno><idno type="pmid">21437257</idno><idno type="doi">10.1371/journal.pone.0017961</idno><idno type="pmc">PMC3060916</idno><idno type="wicri:Area/Main/Corpus">002370</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" 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Lifen" sort="Jiang, Lifen" uniqKey="Jiang L" first="Lifen" last="Jiang">Lifen Jiang</name></author><author><name sortKey="Yang, Ji" sort="Yang, Ji" uniqKey="Yang J" first="Ji" last="Yang">Ji Yang</name></author><author><name sortKey="Fang, Changming" sort="Fang, Changming" uniqKey="Fang C" first="Changming" last="Fang">Changming Fang</name></author><author><name sortKey="Chen, Jiakuan" sort="Chen, Jiakuan" uniqKey="Chen J" first="Jiakuan" last="Chen">Jiakuan Chen</name></author><author><name sortKey="Li, Bo" sort="Li, Bo" uniqKey="Li B" first="Bo" last="Li">Bo Li</name></author></analytic><series><title level="j">PloS one</title><idno type="eISSN">1932-6203</idno><imprint><date when="2011" type="published">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bacteria (genetics)</term><term>Biodegradation, Environmental (MeSH)</term><term>China (MeSH)</term><term>Colony Count, Microbial (MeSH)</term><term>Genes, Bacterial (genetics)</term><term>Host-Pathogen Interactions (physiology)</term><term>Mycorrhizae (growth & development)</term><term>Petroleum (analysis)</term><term>Petroleum (microbiology)</term><term>Plant Development (MeSH)</term><term>Plants (metabolism)</term><term>Plants (microbiology)</term><term>Quantitative Trait, Heritable (MeSH)</term><term>Regression Analysis (MeSH)</term><term>Soil Microbiology (MeSH)</term><term>Soil Pollutants (isolation & purification)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>Petroleum</term></keywords><keywords scheme="MESH" type="chemical" qualifier="isolation & purification" xml:lang="en"><term>Soil Pollutants</term></keywords><keywords scheme="MESH" type="chemical" qualifier="microbiology" xml:lang="en"><term>Petroleum</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>China</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Bacteria</term><term>Genes, Bacterial</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Plants</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plants</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Host-Pathogen Interactions</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Biodegradation, Environmental</term><term>Colony Count, Microbial</term><term>Plant Development</term><term>Quantitative Trait, Heritable</term><term>Regression Analysis</term><term>Soil Microbiology</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Plant-microbe interactions are considered to be important processes determining the efficiency of phytoremediation of petroleum pollution, however relatively little is known about how these interactions are influenced by petroleum pollution. In this experimental study using a microcosm approach, we examined how plant ecophysiological traits, soil nutrients and microbial activities were influenced by petroleum pollution in Phragmites australis, a phytoremediating species. Generally, petroleum pollution reduced plant performance, especially at early stages of plant growth. Petroleum had negative effects on the net accumulation of inorganic nitrogen from its organic forms (net nitrogen mineralization (NNM)) most likely by decreasing the inorganic nitrogen available to the plants in petroleum-polluted soils. However, abundant dissolved organic nitrogen (DON) was found in petroleum-polluted soil. In order to overcome initial deficiency of inorganic nitrogen, plants by dint of high colonization of arbuscular mycorrhizal fungi might absorb some DON for their growth in petroleum-polluted soils. In addition, through using a real-time polymerase chain reaction method, we quantified hydrocarbon-degrading bacterial traits based on their catabolic genes (i.e. alkB (alkane monooxygenase), nah (naphthalene dioxygenase) and tol (xylene monooxygenase) genes). This enumeration of target genes suggests that different hydrocarbon-degrading bacteria experienced different dynamic changes during phytoremediation and a greater abundance of alkB was detected during vegetative growth stages. Because phytoremediation of different components of petroleum is performed by different hydrocarbon-degrading bacteria, plants' ability of phytoremediating different components might therefore vary during the plant life cycle. Phytoremediation might be most effective during the vegetative growth stages as greater abundances of hydrocarbon-degrading bacteria containing alkB and tol genes were observed at these stages. The information provided by this study enhances our understanding of the effects of petroleum pollution on plant-microbe interactions and the roles of these interactions in the phytoremediation of petroleum-polluted soil.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">21437257</PMID><DateCompleted><Year>2011</Year><Month>07</Month><Day>05</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>6</Volume><Issue>3</Issue><PubDate><Year>2011</Year><Month>Mar</Month><Day>18</Day></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS One</ISOAbbreviation></Journal><ArticleTitle>Understanding plant-microbe interactions for phytoremediation of petroleum-polluted soil.</ArticleTitle><Pagination><MedlinePgn>e17961</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0017961</ELocationID><Abstract><AbstractText>Plant-microbe interactions are considered to be important processes determining the efficiency of phytoremediation of petroleum pollution, however relatively little is known about how these interactions are influenced by petroleum pollution. In this experimental study using a microcosm approach, we examined how plant ecophysiological traits, soil nutrients and microbial activities were influenced by petroleum pollution in Phragmites australis, a phytoremediating species. Generally, petroleum pollution reduced plant performance, especially at early stages of plant growth. Petroleum had negative effects on the net accumulation of inorganic nitrogen from its organic forms (net nitrogen mineralization (NNM)) most likely by decreasing the inorganic nitrogen available to the plants in petroleum-polluted soils. However, abundant dissolved organic nitrogen (DON) was found in petroleum-polluted soil. In order to overcome initial deficiency of inorganic nitrogen, plants by dint of high colonization of arbuscular mycorrhizal fungi might absorb some DON for their growth in petroleum-polluted soils. In addition, through using a real-time polymerase chain reaction method, we quantified hydrocarbon-degrading bacterial traits based on their catabolic genes (i.e. alkB (alkane monooxygenase), nah (naphthalene dioxygenase) and tol (xylene monooxygenase) genes). This enumeration of target genes suggests that different hydrocarbon-degrading bacteria experienced different dynamic changes during phytoremediation and a greater abundance of alkB was detected during vegetative growth stages. Because phytoremediation of different components of petroleum is performed by different hydrocarbon-degrading bacteria, plants' ability of phytoremediating different components might therefore vary during the plant life cycle. Phytoremediation might be most effective during the vegetative growth stages as greater abundances of hydrocarbon-degrading bacteria containing alkB and tol genes were observed at these stages. The information provided by this study enhances our understanding of the effects of petroleum pollution on plant-microbe interactions and the roles of these interactions in the phytoremediation of petroleum-polluted soil.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Nie</LastName><ForeName>Ming</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Coastal Ecosystems Research Station of the Yangtze River Estuary, Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, Fudan University, Shanghai, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Yijing</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Yu</LastName><ForeName>Jiayi</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Xiao</LastName><ForeName>Ming</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Jiang</LastName><ForeName>Lifen</ForeName><Initials>L</Initials></Author><Author ValidYN="Y"><LastName>Yang</LastName><ForeName>Ji</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Fang</LastName><ForeName>Changming</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Chen</LastName><ForeName>Jiakuan</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Bo</ForeName><Initials>B</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2011</Year><Month>03</Month><Day>18</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>PLoS 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