Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis.
Identifieur interne : 002311 ( Main/Corpus ); précédent : 002310; suivant : 002312Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis.
Auteurs : Emanuel A. Devers ; Anja Branscheid ; Patrick May ; Franziska KrajinskiSource :
- Plant physiology [ 1532-2548 ] ; 2011.
English descriptors
- KwdEn :
- Base Sequence (MeSH), Gene Expression Profiling (MeSH), Gene Expression Regulation, Plant (MeSH), Gene Library (MeSH), Genes, Plant (genetics), Genome, Plant (genetics), High-Throughput Nucleotide Sequencing (MeSH), In Situ Hybridization (MeSH), Medicago truncatula (genetics), Medicago truncatula (microbiology), MicroRNAs (genetics), MicroRNAs (metabolism), Molecular Sequence Annotation (MeSH), Mycorrhizae (physiology), Organ Specificity (genetics), RNA Stability (genetics), RNA, Messenger (genetics), RNA, Messenger (metabolism), RNA, Plant (genetics), Reverse Transcriptase Polymerase Chain Reaction (MeSH), Symbiosis (genetics), Transcriptome (genetics).
- MESH :
- chemical , genetics : MicroRNAs, RNA, Messenger, RNA, Plant.
- genetics : Genes, Plant, Genome, Plant, Medicago truncatula, Organ Specificity, RNA Stability, Symbiosis, Transcriptome.
- chemical , metabolism : MicroRNAs, RNA, Messenger.
- microbiology : Medicago truncatula.
- physiology : Mycorrhizae.
- Base Sequence, Gene Expression Profiling, Gene Expression Regulation, Plant, Gene Library, High-Throughput Nucleotide Sequencing, In Situ Hybridization, Molecular Sequence Annotation, Reverse Transcriptase Polymerase Chain Reaction.
Abstract
The majority of plants are able to form the arbuscular mycorrhizal (AM) symbiosis in association with AM fungi. During symbiosis development, plant cells undergo a complex reprogramming resulting in profound morphological and physiological changes. MicroRNAs (miRNAs) are important components of the regulatory network of plant cells. To unravel the impact of miRNAs and miRNA-mediated mRNA cleavage on root cell reprogramming during AM symbiosis, we carried out high-throughput (Illumina) sequencing of small RNAs and degradome tags of Medicago truncatula roots. This led to the annotation of 243 novel miRNAs. An increased accumulation of several novel and conserved miRNAs in mycorrhizal roots suggest a role of these miRNAs during AM symbiosis. The degradome analysis led to the identification of 185 root transcripts as mature miRNA and also miRNA*-mediated mRNA cleavage targets. Several of the identified miRNA targets are known to be involved in root symbioses. In summary, the increased accumulation of specific miRNAs and the miRNA-mediated cleavage of symbiosis-relevant genes indicate that miRNAs are an important part of the regulatory network leading to symbiosis development.
DOI: 10.1104/pp.111.172627
PubMed: 21571671
PubMed Central: PMC3149951
Links to Exploration step
pubmed:21571671Le document en format XML
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During symbiosis development, plant cells undergo a complex reprogramming resulting in profound morphological and physiological changes. MicroRNAs (miRNAs) are important components of the regulatory network of plant cells. To unravel the impact of miRNAs and miRNA-mediated mRNA cleavage on root cell reprogramming during AM symbiosis, we carried out high-throughput (Illumina) sequencing of small RNAs and degradome tags of Medicago truncatula roots. This led to the annotation of 243 novel miRNAs. An increased accumulation of several novel and conserved miRNAs in mycorrhizal roots suggest a role of these miRNAs during AM symbiosis. The degradome analysis led to the identification of 185 root transcripts as mature miRNA and also miRNA*-mediated mRNA cleavage targets. Several of the identified miRNA targets are known to be involved in root symbioses. In summary, the increased accumulation of specific miRNAs and the miRNA-mediated cleavage of symbiosis-relevant genes indicate that miRNAs are an important part of the regulatory network leading to symbiosis development.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">21571671</PMID><DateCompleted><Year>2011</Year><Month>12</Month><Day>05</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1532-2548</ISSN><JournalIssue CitedMedium="Internet"><Volume>156</Volume><Issue>4</Issue><PubDate><Year>2011</Year><Month>Aug</Month></PubDate></JournalIssue><Title>Plant physiology</Title><ISOAbbreviation>Plant Physiol</ISOAbbreviation></Journal><ArticleTitle>Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis.</ArticleTitle><Pagination><MedlinePgn>1990-2010</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1104/pp.111.172627</ELocationID><Abstract><AbstractText>The majority of plants are able to form the arbuscular mycorrhizal (AM) symbiosis in association with AM fungi. During symbiosis development, plant cells undergo a complex reprogramming resulting in profound morphological and physiological changes. MicroRNAs (miRNAs) are important components of the regulatory network of plant cells. To unravel the impact of miRNAs and miRNA-mediated mRNA cleavage on root cell reprogramming during AM symbiosis, we carried out high-throughput (Illumina) sequencing of small RNAs and degradome tags of Medicago truncatula roots. This led to the annotation of 243 novel miRNAs. An increased accumulation of several novel and conserved miRNAs in mycorrhizal roots suggest a role of these miRNAs during AM symbiosis. The degradome analysis led to the identification of 185 root transcripts as mature miRNA and also miRNA*-mediated mRNA cleavage targets. Several of the identified miRNA targets are known to be involved in root symbioses. In summary, the increased accumulation of specific miRNAs and the miRNA-mediated cleavage of symbiosis-relevant genes indicate that miRNAs are an important part of the regulatory network leading to symbiosis development.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Devers</LastName><ForeName>Emanuel A</ForeName><Initials>EA</Initials><AffiliationInfo><Affiliation>Max-Planck-Institute of Molecular Plant Physiology, 14476 Potsdam/Golm, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Branscheid</LastName><ForeName>Anja</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>May</LastName><ForeName>Patrick</ForeName><Initials>P</Initials></Author><Author ValidYN="Y"><LastName>Krajinski</LastName><ForeName>Franziska</ForeName><Initials>F</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType 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