MycorrhizaeV1, Main, Corpus, bibRecord, 002081

Distinct ectomycorrhizospheres share similar bacterial communities as revealed by pyrosequencing-based analysis of 16S rRNA genes.

Identifieur interne : 002081 ( Main/Corpus ); précédent : 002080; suivant : 002082

Distinct ectomycorrhizospheres share similar bacterial communities as revealed by pyrosequencing-based analysis of 16S rRNA genes.

Auteurs : S. Uroz ; P. Oger ; E. Morin ; P. Frey-Klett

Source :

Applied and environmental microbiology [ 1098-5336 ] ; 2012.

RBID : pubmed:22307291

English descriptors

KwdEn :
- Bacteria (classification), Bacteria (genetics), Bacteria (isolation & purification), Basidiomycota (growth & development), Biodiversity (MeSH), Cluster Analysis (MeSH), DNA, Bacterial (chemistry), DNA, Bacterial (genetics), DNA, Ribosomal (chemistry), DNA, Ribosomal (genetics), Molecular Sequence Data (MeSH), Mycorrhizae (growth & development), Phylogeny (MeSH), RNA, Ribosomal, 16S (genetics), Rhizosphere (MeSH), Sequence Analysis, DNA (MeSH), Soil Microbiology (MeSH).
MESH :
- chemical , chemistry : DNA, Bacterial, DNA, Ribosomal.
- classification : Bacteria.
- genetics : Bacteria, DNA, Bacterial, DNA, Ribosomal, RNA, Ribosomal, 16S.
- growth & development : Basidiomycota, Mycorrhizae.
- isolation & purification : Bacteria.
- Biodiversity, Cluster Analysis, Molecular Sequence Data, Phylogeny, Rhizosphere, Sequence Analysis, DNA, Soil Microbiology.

Abstract

Analysis of the 16S rRNA gene sequences generated from Xerocomus pruinatus and Scleroderma citrinum ectomycorrhizospheres revealed that similar bacterial communities inhabited the two ectomycorrhizospheres in terms of phyla and genera, with an enrichment of the Burkholderia genus. Compared to the bulk soil habitat, ectomycorrhizospheres hosted significantly more Alpha-, Beta-, and Gammaproteobacteria.

DOI: 10.1128/AEM.06742-11
PubMed: 22307291
PubMed Central: PMC3318831

Links to Exploration step

pubmed:22307291

Le document en format XML

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<author><name sortKey="Uroz, S" sort="Uroz, S" uniqKey="Uroz S" first="S" last="Uroz">S. Uroz</name>
<affiliation><nlm:affiliation>INRA, UMR 1136 INRA-Nancy Université, Interactions Arbres Micro-organismes, Centre INRA de Nancy, Champenoux, France. uroz@nancy.inra.fr</nlm:affiliation>
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<author><name sortKey="Oger, P" sort="Oger, P" uniqKey="Oger P" first="P" last="Oger">P. Oger</name>
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<author><name sortKey="Morin, E" sort="Morin, E" uniqKey="Morin E" first="E" last="Morin">E. Morin</name>
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<author><name sortKey="Frey Klett, P" sort="Frey Klett, P" uniqKey="Frey Klett P" first="P" last="Frey-Klett">P. Frey-Klett</name>
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<affiliation><nlm:affiliation>INRA, UMR 1136 INRA-Nancy Université, Interactions Arbres Micro-organismes, Centre INRA de Nancy, Champenoux, France. uroz@nancy.inra.fr</nlm:affiliation>
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<author><name sortKey="Morin, E" sort="Morin, E" uniqKey="Morin E" first="E" last="Morin">E. Morin</name>
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<author><name sortKey="Frey Klett, P" sort="Frey Klett, P" uniqKey="Frey Klett P" first="P" last="Frey-Klett">P. Frey-Klett</name>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bacteria (classification)</term>
<term>Bacteria (genetics)</term>
<term>Bacteria (isolation & purification)</term>
<term>Basidiomycota (growth & development)</term>
<term>Biodiversity (MeSH)</term>
<term>Cluster Analysis (MeSH)</term>
<term>DNA, Bacterial (chemistry)</term>
<term>DNA, Bacterial (genetics)</term>
<term>DNA, Ribosomal (chemistry)</term>
<term>DNA, Ribosomal (genetics)</term>
<term>Molecular Sequence Data (MeSH)</term>
<term>Mycorrhizae (growth & development)</term>
<term>Phylogeny (MeSH)</term>
<term>RNA, Ribosomal, 16S (genetics)</term>
<term>Rhizosphere (MeSH)</term>
<term>Sequence Analysis, DNA (MeSH)</term>
<term>Soil Microbiology (MeSH)</term>
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<term>DNA, Ribosomal</term>
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<keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Basidiomycota</term>
<term>Mycorrhizae</term>
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<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Bacteria</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Biodiversity</term>
<term>Cluster Analysis</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>Rhizosphere</term>
<term>Sequence Analysis, DNA</term>
<term>Soil Microbiology</term>
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<front><div type="abstract" xml:lang="en">Analysis of the 16S rRNA gene sequences generated from Xerocomus pruinatus and Scleroderma citrinum ectomycorrhizospheres revealed that similar bacterial communities inhabited the two ectomycorrhizospheres in terms of phyla and genera, with an enrichment of the Burkholderia genus. Compared to the bulk soil habitat, ectomycorrhizospheres hosted significantly more Alpha-, Beta-, and Gammaproteobacteria.</div>
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Distinct ectomycorrhizospheres share similar bacterial communities as revealed by pyrosequencing-based analysis of 16S rRNA genes.

Distinct ectomycorrhizospheres share similar bacterial communities as revealed by pyrosequencing-based analysis of 16S rRNA genes.

Source :

English descriptors

Abstract

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki