Heart of endosymbioses: transcriptomics reveals a conserved genetic program among arbuscular mycorrhizal, actinorhizal and legume-rhizobial symbioses.
Identifieur interne : 001E57 ( Main/Corpus ); précédent : 001E56; suivant : 001E58Heart of endosymbioses: transcriptomics reveals a conserved genetic program among arbuscular mycorrhizal, actinorhizal and legume-rhizobial symbioses.
Auteurs : Alexandre Tromas ; Boris Parizot ; Nathalie Diagne ; Antony Champion ; Valérie Hocher ; Maïmouna Cissoko ; Amandine Crabos ; Hermann Prodjinoto ; Benoit Lahouze ; Didier Bogusz ; Laurent Laplaze ; Sergio SvistoonoffSource :
- PloS one [ 1932-6203 ] ; 2012.
English descriptors
- KwdEn :
- MESH :
- genetics : Fabaceae, Mycorrhizae, Rhizobium.
- physiology : Fabaceae, Mycorrhizae, Rhizobium.
- Gene Expression, Genes, Bacterial, Genes, Fungal, Genes, Plant, Symbiosis, Transcriptome.
Abstract
To improve their nutrition, most plants associate with soil microorganisms, particularly fungi, to form mycorrhizae. A few lineages, including actinorhizal plants and legumes are also able to interact with nitrogen-fixing bacteria hosted intracellularly inside root nodules. Fossil and molecular data suggest that the molecular mechanisms involved in these root nodule symbioses (RNS) have been partially recycled from more ancient and widespread arbuscular mycorrhizal (AM) symbiosis. We used a comparative transcriptomics approach to identify genes involved in establishing these 3 endosymbioses and their functioning. We analysed global changes in gene expression in AM in the actinorhizal tree C. glauca. A comparison with genes induced in AM in Medicago truncatula and Oryza sativa revealed a common set of genes induced in AM. A comparison with genes induced in nitrogen-fixing nodules of C. glauca and M. truncatula also made it possible to define a common set of genes induced in these three endosymbioses. The existence of this core set of genes is in accordance with the proposed recycling of ancient AM genes for new functions related to nodulation in legumes and actinorhizal plants.
DOI: 10.1371/journal.pone.0044742
PubMed: 22970303
PubMed Central: PMC3435296
Links to Exploration step
pubmed:22970303Le document en format XML
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Tromas</name><affiliation><nlm:affiliation>Laboratoire Commun de Microbiologie IRD/ISRA/UCAD, Centre de Recherche de Bel Air, Dakar, Senegal.</nlm:affiliation></affiliation></author><author><name sortKey="Parizot, Boris" sort="Parizot, Boris" uniqKey="Parizot B" first="Boris" last="Parizot">Boris Parizot</name></author><author><name sortKey="Diagne, Nathalie" sort="Diagne, Nathalie" uniqKey="Diagne N" first="Nathalie" last="Diagne">Nathalie Diagne</name></author><author><name sortKey="Champion, Antony" sort="Champion, Antony" uniqKey="Champion A" first="Antony" last="Champion">Antony Champion</name></author><author><name sortKey="Hocher, Valerie" sort="Hocher, Valerie" uniqKey="Hocher V" first="Valérie" last="Hocher">Valérie Hocher</name></author><author><name sortKey="Cissoko, Maimouna" sort="Cissoko, Maimouna" uniqKey="Cissoko M" first="Maïmouna" last="Cissoko">Maïmouna Cissoko</name></author><author><name sortKey="Crabos, Amandine" sort="Crabos, Amandine" uniqKey="Crabos A" first="Amandine" last="Crabos">Amandine Crabos</name></author><author><name sortKey="Prodjinoto, Hermann" sort="Prodjinoto, Hermann" uniqKey="Prodjinoto H" first="Hermann" last="Prodjinoto">Hermann Prodjinoto</name></author><author><name sortKey="Lahouze, Benoit" sort="Lahouze, Benoit" uniqKey="Lahouze B" first="Benoit" last="Lahouze">Benoit Lahouze</name></author><author><name sortKey="Bogusz, Didier" sort="Bogusz, Didier" uniqKey="Bogusz D" first="Didier" last="Bogusz">Didier Bogusz</name></author><author><name sortKey="Laplaze, Laurent" sort="Laplaze, Laurent" uniqKey="Laplaze L" first="Laurent" last="Laplaze">Laurent Laplaze</name></author><author><name sortKey="Svistoonoff, Sergio" sort="Svistoonoff, Sergio" uniqKey="Svistoonoff S" first="Sergio" last="Svistoonoff">Sergio Svistoonoff</name></author></analytic><series><title level="j">PloS one</title><idno type="eISSN">1932-6203</idno><imprint><date when="2012" type="published">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Fabaceae (genetics)</term><term>Fabaceae (physiology)</term><term>Gene Expression (MeSH)</term><term>Genes, Bacterial (MeSH)</term><term>Genes, Fungal (MeSH)</term><term>Genes, Plant (MeSH)</term><term>Mycorrhizae (genetics)</term><term>Mycorrhizae (physiology)</term><term>Rhizobium (genetics)</term><term>Rhizobium (physiology)</term><term>Symbiosis (MeSH)</term><term>Transcriptome (MeSH)</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Fabaceae</term><term>Mycorrhizae</term><term>Rhizobium</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Fabaceae</term><term>Mycorrhizae</term><term>Rhizobium</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Gene Expression</term><term>Genes, Bacterial</term><term>Genes, Fungal</term><term>Genes, Plant</term><term>Symbiosis</term><term>Transcriptome</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">To improve their nutrition, most plants associate with soil microorganisms, particularly fungi, to form mycorrhizae. A few lineages, including actinorhizal plants and legumes are also able to interact with nitrogen-fixing bacteria hosted intracellularly inside root nodules. Fossil and molecular data suggest that the molecular mechanisms involved in these root nodule symbioses (RNS) have been partially recycled from more ancient and widespread arbuscular mycorrhizal (AM) symbiosis. We used a comparative transcriptomics approach to identify genes involved in establishing these 3 endosymbioses and their functioning. We analysed global changes in gene expression in AM in the actinorhizal tree C. glauca. A comparison with genes induced in AM in Medicago truncatula and Oryza sativa revealed a common set of genes induced in AM. A comparison with genes induced in nitrogen-fixing nodules of C. glauca and M. truncatula also made it possible to define a common set of genes induced in these three endosymbioses. The existence of this core set of genes is in accordance with the proposed recycling of ancient AM genes for new functions related to nodulation in legumes and actinorhizal plants.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">22970303</PMID><DateCompleted><Year>2013</Year><Month>03</Month><Day>07</Day></DateCompleted><DateRevised><Year>2020</Year><Month>03</Month><Day>05</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>7</Volume><Issue>9</Issue><PubDate><Year>2012</Year></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS One</ISOAbbreviation></Journal><ArticleTitle>Heart of endosymbioses: transcriptomics reveals a conserved genetic program among arbuscular mycorrhizal, actinorhizal and legume-rhizobial symbioses.</ArticleTitle><Pagination><MedlinePgn>e44742</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0044742</ELocationID><Abstract><AbstractText>To improve their nutrition, most plants associate with soil microorganisms, particularly fungi, to form mycorrhizae. A few lineages, including actinorhizal plants and legumes are also able to interact with nitrogen-fixing bacteria hosted intracellularly inside root nodules. Fossil and molecular data suggest that the molecular mechanisms involved in these root nodule symbioses (RNS) have been partially recycled from more ancient and widespread arbuscular mycorrhizal (AM) symbiosis. We used a comparative transcriptomics approach to identify genes involved in establishing these 3 endosymbioses and their functioning. We analysed global changes in gene expression in AM in the actinorhizal tree C. glauca. A comparison with genes induced in AM in Medicago truncatula and Oryza sativa revealed a common set of genes induced in AM. A comparison with genes induced in nitrogen-fixing nodules of C. glauca and M. truncatula also made it possible to define a common set of genes induced in these three endosymbioses. The existence of this core set of genes is in accordance with the proposed recycling of ancient AM genes for new functions related to nodulation in legumes and actinorhizal plants.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Tromas</LastName><ForeName>Alexandre</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Laboratoire Commun de Microbiologie IRD/ISRA/UCAD, Centre de Recherche de Bel Air, Dakar, Senegal.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Parizot</LastName><ForeName>Boris</ForeName><Initials>B</Initials></Author><Author ValidYN="Y"><LastName>Diagne</LastName><ForeName>Nathalie</ForeName><Initials>N</Initials></Author><Author ValidYN="Y"><LastName>Champion</LastName><ForeName>Antony</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Hocher</LastName><ForeName>Valérie</ForeName><Initials>V</Initials></Author><Author ValidYN="Y"><LastName>Cissoko</LastName><ForeName>Maïmouna</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Crabos</LastName><ForeName>Amandine</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Prodjinoto</LastName><ForeName>Hermann</ForeName><Initials>H</Initials></Author><Author ValidYN="Y"><LastName>Lahouze</LastName><ForeName>Benoit</ForeName><Initials>B</Initials></Author><Author ValidYN="Y"><LastName>Bogusz</LastName><ForeName>Didier</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Laplaze</LastName><ForeName>Laurent</ForeName><Initials>L</Initials></Author><Author ValidYN="Y"><LastName>Svistoonoff</LastName><ForeName>Sergio</ForeName><Initials>S</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate 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