Genetic diversity for mycorrhizal symbiosis and phosphate transporters in rice.
Identifieur interne : 001314 ( Main/Corpus ); précédent : 001313; suivant : 001315Genetic diversity for mycorrhizal symbiosis and phosphate transporters in rice.
Auteurs : Kwanho Jeong ; Nicolas Mattes ; Sheryl Catausan ; Joong Hyoun Chin ; Uta Paszkowski ; Sigrid HeuerSource :
- Journal of integrative plant biology [ 1744-7909 ] ; 2015.
English descriptors
- KwdEn :
- Agriculture (MeSH), Crops, Agricultural (genetics), Crops, Agricultural (microbiology), Genetic Variation (MeSH), Genotype (MeSH), Mycorrhizae (MeSH), Oryza (genetics), Oryza (metabolism), Oryza (microbiology), Phosphate Transport Proteins (genetics), Phosphates (metabolism), Soil (MeSH), Species Specificity (MeSH), Symbiosis (MeSH).
- MESH :
- chemical , genetics : Phosphate Transport Proteins.
- genetics : Crops, Agricultural, Oryza.
- metabolism : Oryza, Phosphates.
- microbiology : Crops, Agricultural, Oryza.
- Agriculture, Genetic Variation, Genotype, Mycorrhizae, Soil, Species Specificity, Symbiosis.
Abstract
Phosphorus (P) is a major plant nutrient and developing crops with higher P-use efficiency is an important breeding goal. In this context we have conducted a comparative study of irrigated and rainfed rice varieties to assess genotypic differences in colonization with arbuscular mycorrhizal (AM) fungi and expression of different P transporter genes. Plants were grown in three different soil samples from a rice farm in the Philippines. The data show that AM symbiosis in all varieties was established after 4 weeks of growth under aerobic conditions and that, in soil derived from a rice paddy, natural AM populations recovered within 6 weeks. The analysis of AM marker genes (AM1, AM3, AM14) and P transporter genes for the direct Pi uptake (PT2, PT6) and AM-mediated pathway (PT11, PT13) were largely in agreement with the observed root AM colonization providing a useful tool for diversity studies. Interestingly, delayed AM colonization was observed in the aus-type rice varieties which might be due to their different root structure and might confer an advantage for weed competition in the field. The data further showed that P-starvation induced root growth and expression of the high-affinity P transporter PT6 was highest in the irrigated variety IR66 which also maintained grain yield under P-deficient field conditions.
DOI: 10.1111/jipb.12435
PubMed: 26466747
Links to Exploration step
pubmed:26466747Le document en format XML
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Environmental Sciences Division, 7777 Metro Manila, Philippines.</nlm:affiliation></affiliation></author><author><name sortKey="Chin, Joong Hyoun" sort="Chin, Joong Hyoun" uniqKey="Chin J" first="Joong Hyoun" last="Chin">Joong Hyoun Chin</name><affiliation><nlm:affiliation>Seoul National University, College of Agriculture and Life Sciences, Plant Genomics and Breeding Institute, 1 Gwanak-ro, Gwanak-gu, Seoul, Republic of Korea.</nlm:affiliation></affiliation></author><author><name sortKey="Paszkowski, Uta" sort="Paszkowski, Uta" uniqKey="Paszkowski U" first="Uta" last="Paszkowski">Uta Paszkowski</name><affiliation><nlm:affiliation>University of Cambridge, Department of Plant Sciences, Downing Street, Cambridge, CB2, 3EA, UK.</nlm:affiliation></affiliation></author><author><name sortKey="Heuer, Sigrid" sort="Heuer, Sigrid" uniqKey="Heuer S" first="Sigrid" last="Heuer">Sigrid Heuer</name><affiliation><nlm:affiliation>Australian Center For Plant Functional Genomics (ACPFG), Adelaide, SA 5064, Australia.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2015">2015</date><idno type="RBID">pubmed:26466747</idno><idno type="pmid">26466747</idno><idno type="doi">10.1111/jipb.12435</idno><idno type="wicri:Area/Main/Corpus">001314</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001314</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Genetic diversity for mycorrhizal symbiosis and phosphate transporters in rice.</title><author><name sortKey="Jeong, Kwanho" sort="Jeong, Kwanho" uniqKey="Jeong K" first="Kwanho" last="Jeong">Kwanho Jeong</name><affiliation><nlm:affiliation>Southern Cross Plant Science, Southern Cross University, PO Box 57 Lismore NSW 2480, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Mattes, Nicolas" sort="Mattes, Nicolas" uniqKey="Mattes N" first="Nicolas" last="Mattes">Nicolas Mattes</name><affiliation><nlm:affiliation>International Rice Research Institute (IRRI), Crop and Environmental Sciences Division, 7777 Metro Manila, Philippines.</nlm:affiliation></affiliation></author><author><name sortKey="Catausan, Sheryl" sort="Catausan, Sheryl" uniqKey="Catausan S" first="Sheryl" last="Catausan">Sheryl Catausan</name><affiliation><nlm:affiliation>International Rice Research Institute (IRRI), Crop and Environmental Sciences Division, 7777 Metro Manila, Philippines.</nlm:affiliation></affiliation></author><author><name sortKey="Chin, Joong Hyoun" sort="Chin, Joong Hyoun" uniqKey="Chin J" first="Joong Hyoun" last="Chin">Joong Hyoun Chin</name><affiliation><nlm:affiliation>Seoul National University, College of Agriculture and Life Sciences, Plant Genomics and Breeding Institute, 1 Gwanak-ro, Gwanak-gu, Seoul, Republic of Korea.</nlm:affiliation></affiliation></author><author><name sortKey="Paszkowski, Uta" sort="Paszkowski, Uta" uniqKey="Paszkowski U" first="Uta" last="Paszkowski">Uta Paszkowski</name><affiliation><nlm:affiliation>University of Cambridge, Department of Plant Sciences, Downing Street, Cambridge, CB2, 3EA, UK.</nlm:affiliation></affiliation></author><author><name sortKey="Heuer, Sigrid" sort="Heuer, Sigrid" uniqKey="Heuer S" first="Sigrid" last="Heuer">Sigrid Heuer</name><affiliation><nlm:affiliation>Australian Center For Plant Functional Genomics (ACPFG), Adelaide, SA 5064, Australia.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Journal of integrative plant biology</title><idno type="eISSN">1744-7909</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Agriculture (MeSH)</term><term>Crops, Agricultural (genetics)</term><term>Crops, Agricultural (microbiology)</term><term>Genetic Variation (MeSH)</term><term>Genotype (MeSH)</term><term>Mycorrhizae (MeSH)</term><term>Oryza (genetics)</term><term>Oryza (metabolism)</term><term>Oryza (microbiology)</term><term>Phosphate Transport Proteins (genetics)</term><term>Phosphates (metabolism)</term><term>Soil (MeSH)</term><term>Species Specificity (MeSH)</term><term>Symbiosis (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Phosphate Transport Proteins</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Crops, Agricultural</term><term>Oryza</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Oryza</term><term>Phosphates</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Crops, Agricultural</term><term>Oryza</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Agriculture</term><term>Genetic Variation</term><term>Genotype</term><term>Mycorrhizae</term><term>Soil</term><term>Species Specificity</term><term>Symbiosis</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Phosphorus (P) is a major plant nutrient and developing crops with higher P-use efficiency is an important breeding goal. In this context we have conducted a comparative study of irrigated and rainfed rice varieties to assess genotypic differences in colonization with arbuscular mycorrhizal (AM) fungi and expression of different P transporter genes. Plants were grown in three different soil samples from a rice farm in the Philippines. The data show that AM symbiosis in all varieties was established after 4 weeks of growth under aerobic conditions and that, in soil derived from a rice paddy, natural AM populations recovered within 6 weeks. The analysis of AM marker genes (AM1, AM3, AM14) and P transporter genes for the direct Pi uptake (PT2, PT6) and AM-mediated pathway (PT11, PT13) were largely in agreement with the observed root AM colonization providing a useful tool for diversity studies. Interestingly, delayed AM colonization was observed in the aus-type rice varieties which might be due to their different root structure and might confer an advantage for weed competition in the field. The data further showed that P-starvation induced root growth and expression of the high-affinity P transporter PT6 was highest in the irrigated variety IR66 which also maintained grain yield under P-deficient field conditions.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26466747</PMID><DateCompleted><Year>2016</Year><Month>09</Month><Day>07</Day></DateCompleted><DateRevised><Year>2017</Year><Month>11</Month><Day>16</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1744-7909</ISSN><JournalIssue CitedMedium="Internet"><Volume>57</Volume><Issue>11</Issue><PubDate><Year>2015</Year><Month>Nov</Month></PubDate></JournalIssue><Title>Journal of integrative plant biology</Title><ISOAbbreviation>J Integr Plant Biol</ISOAbbreviation></Journal><ArticleTitle>Genetic diversity for mycorrhizal symbiosis and phosphate transporters in rice.</ArticleTitle><Pagination><MedlinePgn>969-79</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/jipb.12435</ELocationID><Abstract><AbstractText>Phosphorus (P) is a major plant nutrient and developing crops with higher P-use efficiency is an important breeding goal. In this context we have conducted a comparative study of irrigated and rainfed rice varieties to assess genotypic differences in colonization with arbuscular mycorrhizal (AM) fungi and expression of different P transporter genes. Plants were grown in three different soil samples from a rice farm in the Philippines. The data show that AM symbiosis in all varieties was established after 4 weeks of growth under aerobic conditions and that, in soil derived from a rice paddy, natural AM populations recovered within 6 weeks. The analysis of AM marker genes (AM1, AM3, AM14) and P transporter genes for the direct Pi uptake (PT2, PT6) and AM-mediated pathway (PT11, PT13) were largely in agreement with the observed root AM colonization providing a useful tool for diversity studies. Interestingly, delayed AM colonization was observed in the aus-type rice varieties which might be due to their different root structure and might confer an advantage for weed competition in the field. The data further showed that P-starvation induced root growth and expression of the high-affinity P transporter PT6 was highest in the irrigated variety IR66 which also maintained grain yield under P-deficient field conditions.</AbstractText><CopyrightInformation>© 2015 Institute of Botany, Chinese Academy of Sciences.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Jeong</LastName><ForeName>Kwanho</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Southern Cross Plant Science, Southern Cross University, PO Box 57 Lismore NSW 2480, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Mattes</LastName><ForeName>Nicolas</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>International Rice Research Institute (IRRI), Crop and Environmental Sciences Division, 7777 Metro Manila, Philippines.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Catausan</LastName><ForeName>Sheryl</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>International Rice Research Institute (IRRI), Crop and Environmental Sciences Division, 7777 Metro Manila, Philippines.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chin</LastName><ForeName>Joong Hyoun</ForeName><Initials>JH</Initials><AffiliationInfo><Affiliation>Seoul National University, College of Agriculture and Life Sciences, Plant Genomics and Breeding Institute, 1 Gwanak-ro, Gwanak-gu, Seoul, Republic of Korea.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Paszkowski</LastName><ForeName>Uta</ForeName><Initials>U</Initials><AffiliationInfo><Affiliation>University of Cambridge, Department of Plant Sciences, Downing Street, Cambridge, CB2, 3EA, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Heuer</LastName><ForeName>Sigrid</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Australian Center For Plant Functional Genomics (ACPFG), Adelaide, SA 5064, Australia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D003160">Comparative Study</PublicationType><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>China (Republic : 1949- )</Country><MedlineTA>J Integr Plant Biol</MedlineTA><NlmUniqueID>101250502</NlmUniqueID><ISSNLinking>1672-9072</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D028061">Phosphate Transport Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010710">Phosphates</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012987">Soil</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000383" MajorTopicYN="N">Agriculture</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018556" MajorTopicYN="N">Crops, Agricultural</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014644" MajorTopicYN="N">Genetic Variation</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005838" MajorTopicYN="N">Genotype</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="Y">Mycorrhizae</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012275" MajorTopicYN="N">Oryza</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D028061" MajorTopicYN="N">Phosphate Transport Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010710" MajorTopicYN="N">Phosphates</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012987" MajorTopicYN="N">Soil</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013045" MajorTopicYN="N">Species Specificity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013559" MajorTopicYN="N">Symbiosis</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Mycorrhiza</Keyword><Keyword MajorTopicYN="N">P deficiency 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