RiPEIP1, a gene from the arbuscular mycorrhizal fungus Rhizophagus irregularis, is preferentially expressed in planta and may be involved in root colonization.
Identifieur interne : 001115 ( Main/Corpus ); précédent : 001114; suivant : 001116RiPEIP1, a gene from the arbuscular mycorrhizal fungus Rhizophagus irregularis, is preferentially expressed in planta and may be involved in root colonization.
Auteurs : Valentina Fiorilli ; Simone Belmondo ; Hassine Radhouane Khouja ; Simona Abbà ; Antonella Faccio ; Stefania Daghino ; Luisa LanfrancoSource :
- Mycorrhiza [ 1432-1890 ] ; 2016.
English descriptors
- KwdEn :
- Fungal Proteins (genetics), Fungal Proteins (metabolism), Gene Expression Regulation, Fungal (physiology), Glomeromycota (genetics), Glomeromycota (metabolism), Green Fluorescent Proteins (metabolism), Medicago truncatula (microbiology), Mycorrhizae (genetics), Mycorrhizae (metabolism), Plant Roots (microbiology), Yeasts (genetics), Yeasts (metabolism).
- MESH :
- chemical , genetics : Fungal Proteins.
- chemical , metabolism : Fungal Proteins, Green Fluorescent Proteins.
- genetics : Glomeromycota, Mycorrhizae, Yeasts.
- metabolism : Glomeromycota, Mycorrhizae, Yeasts.
- microbiology : Medicago truncatula, Plant Roots.
- physiology : Gene Expression Regulation, Fungal.
Abstract
Transcriptomics and genomics data recently obtained from the arbuscular mycorrhizal (AM) fungus Rhizophagus irregularis have offered new opportunities to decipher the contribution of the fungal partner to the establishment of the symbiotic association. The large number of genes which do not show similarity to known proteins witnesses the uniqueness of this group of plant-associated fungi. In this work, we characterize a gene that was called RiPEIP1 (Preferentially Expressed In Planta). Its expression is strongly induced in the intraradical phase, including arbuscules, and follows the expression profile of the Medicago truncatula phosphate transporter MtPT4, a molecular marker of a functional symbiosis. Indeed, mtpt4 mutant plants, which exhibit low mycorrhizal colonization and an accelerated arbuscule turnover, also show a reduced RiPEIP1 mRNA abundance. To further characterize RiPEIP1, in the absence of genetic transformation protocols for AM fungi, we took advantage of two different fungal heterologous systems. When expressed as a GFP fusion in yeast cells, RiPEIP1 localizes in the endomembrane system, in particular to the endoplasmic reticulum, which is consistent with the in silico prediction of four transmembrane domains. We then generated RiPEIP1-expressing strains of the fungus Oidiodendron maius, ericoid endomycorrhizal fungus for which transformation protocols are available. Roots of Vaccinium myrtillus colonized by RiPEIP1-expressing transgenic strains showed a higher mycorrhization level compared to roots colonized by the O. maius wild-type strain, suggesting that RiPEIP1 may regulate the root colonization process.
DOI: 10.1007/s00572-016-0697-0
PubMed: 27075897
Links to Exploration step
pubmed:27075897Le document en format XML
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Hassine Radhouane" uniqKey="Khouja H" first="Hassine Radhouane" last="Khouja">Hassine Radhouane Khouja</name><affiliation><nlm:affiliation>Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.</nlm:affiliation></affiliation></author><author><name sortKey="Abba, Simona" sort="Abba, Simona" uniqKey="Abba S" first="Simona" last="Abbà">Simona Abbà</name><affiliation><nlm:affiliation>Institute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy.</nlm:affiliation></affiliation></author><author><name sortKey="Faccio, Antonella" sort="Faccio, Antonella" uniqKey="Faccio A" first="Antonella" last="Faccio">Antonella Faccio</name><affiliation><nlm:affiliation>Institute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy.</nlm:affiliation></affiliation></author><author><name sortKey="Daghino, Stefania" sort="Daghino, Stefania" uniqKey="Daghino S" 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sortKey="Khouja, Hassine Radhouane" sort="Khouja, Hassine Radhouane" uniqKey="Khouja H" first="Hassine Radhouane" last="Khouja">Hassine Radhouane Khouja</name><affiliation><nlm:affiliation>Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.</nlm:affiliation></affiliation></author><author><name sortKey="Abba, Simona" sort="Abba, Simona" uniqKey="Abba S" first="Simona" last="Abbà">Simona Abbà</name><affiliation><nlm:affiliation>Institute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy.</nlm:affiliation></affiliation></author><author><name sortKey="Faccio, Antonella" sort="Faccio, Antonella" uniqKey="Faccio A" first="Antonella" last="Faccio">Antonella Faccio</name><affiliation><nlm:affiliation>Institute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy.</nlm:affiliation></affiliation></author><author><name sortKey="Daghino, Stefania" sort="Daghino, Stefania" uniqKey="Daghino S" first="Stefania" last="Daghino">Stefania Daghino</name><affiliation><nlm:affiliation>Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.</nlm:affiliation></affiliation></author><author><name sortKey="Lanfranco, Luisa" sort="Lanfranco, Luisa" uniqKey="Lanfranco L" first="Luisa" last="Lanfranco">Luisa Lanfranco</name><affiliation><nlm:affiliation>Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Mycorrhiza</title><idno type="eISSN">1432-1890</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Fungal Proteins (genetics)</term><term>Fungal Proteins (metabolism)</term><term>Gene Expression Regulation, Fungal (physiology)</term><term>Glomeromycota (genetics)</term><term>Glomeromycota (metabolism)</term><term>Green Fluorescent Proteins (metabolism)</term><term>Medicago truncatula (microbiology)</term><term>Mycorrhizae (genetics)</term><term>Mycorrhizae (metabolism)</term><term>Plant Roots (microbiology)</term><term>Yeasts (genetics)</term><term>Yeasts (metabolism)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Fungal Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Fungal Proteins</term><term>Green Fluorescent Proteins</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Glomeromycota</term><term>Mycorrhizae</term><term>Yeasts</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Glomeromycota</term><term>Mycorrhizae</term><term>Yeasts</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Medicago truncatula</term><term>Plant Roots</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Gene Expression Regulation, Fungal</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Transcriptomics and genomics data recently obtained from the arbuscular mycorrhizal (AM) fungus Rhizophagus irregularis have offered new opportunities to decipher the contribution of the fungal partner to the establishment of the symbiotic association. The large number of genes which do not show similarity to known proteins witnesses the uniqueness of this group of plant-associated fungi. In this work, we characterize a gene that was called RiPEIP1 (Preferentially Expressed In Planta). Its expression is strongly induced in the intraradical phase, including arbuscules, and follows the expression profile of the Medicago truncatula phosphate transporter MtPT4, a molecular marker of a functional symbiosis. Indeed, mtpt4 mutant plants, which exhibit low mycorrhizal colonization and an accelerated arbuscule turnover, also show a reduced RiPEIP1 mRNA abundance. To further characterize RiPEIP1, in the absence of genetic transformation protocols for AM fungi, we took advantage of two different fungal heterologous systems. When expressed as a GFP fusion in yeast cells, RiPEIP1 localizes in the endomembrane system, in particular to the endoplasmic reticulum, which is consistent with the in silico prediction of four transmembrane domains. We then generated RiPEIP1-expressing strains of the fungus Oidiodendron maius, ericoid endomycorrhizal fungus for which transformation protocols are available. Roots of Vaccinium myrtillus colonized by RiPEIP1-expressing transgenic strains showed a higher mycorrhization level compared to roots colonized by the O. maius wild-type strain, suggesting that RiPEIP1 may regulate the root colonization process. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">27075897</PMID><DateCompleted><Year>2017</Year><Month>02</Month><Day>17</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-1890</ISSN><JournalIssue CitedMedium="Internet"><Volume>26</Volume><Issue>6</Issue><PubDate><Year>2016</Year><Month>Aug</Month></PubDate></JournalIssue><Title>Mycorrhiza</Title><ISOAbbreviation>Mycorrhiza</ISOAbbreviation></Journal><ArticleTitle>RiPEIP1, a gene from the arbuscular mycorrhizal fungus Rhizophagus irregularis, is preferentially expressed in planta and may be involved in root colonization.</ArticleTitle><Pagination><MedlinePgn>609-21</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00572-016-0697-0</ELocationID><Abstract><AbstractText>Transcriptomics and genomics data recently obtained from the arbuscular mycorrhizal (AM) fungus Rhizophagus irregularis have offered new opportunities to decipher the contribution of the fungal partner to the establishment of the symbiotic association. The large number of genes which do not show similarity to known proteins witnesses the uniqueness of this group of plant-associated fungi. In this work, we characterize a gene that was called RiPEIP1 (Preferentially Expressed In Planta). Its expression is strongly induced in the intraradical phase, including arbuscules, and follows the expression profile of the Medicago truncatula phosphate transporter MtPT4, a molecular marker of a functional symbiosis. Indeed, mtpt4 mutant plants, which exhibit low mycorrhizal colonization and an accelerated arbuscule turnover, also show a reduced RiPEIP1 mRNA abundance. To further characterize RiPEIP1, in the absence of genetic transformation protocols for AM fungi, we took advantage of two different fungal heterologous systems. When expressed as a GFP fusion in yeast cells, RiPEIP1 localizes in the endomembrane system, in particular to the endoplasmic reticulum, which is consistent with the in silico prediction of four transmembrane domains. We then generated RiPEIP1-expressing strains of the fungus Oidiodendron maius, ericoid endomycorrhizal fungus for which transformation protocols are available. Roots of Vaccinium myrtillus colonized by RiPEIP1-expressing transgenic strains showed a higher mycorrhization level compared to roots colonized by the O. maius wild-type strain, suggesting that RiPEIP1 may regulate the root colonization process. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Fiorilli</LastName><ForeName>Valentina</ForeName><Initials>V</Initials><AffiliationInfo><Affiliation>Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy. valentina.fiorilli@unito.it.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Belmondo</LastName><ForeName>Simone</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Khouja</LastName><ForeName>Hassine Radhouane</ForeName><Initials>HR</Initials><AffiliationInfo><Affiliation>Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Abbà</LastName><ForeName>Simona</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Institute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Faccio</LastName><ForeName>Antonella</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Institute for Sustainable Plant Protection (IPSP), CNR, Strada delle Cacce 73, 10135, Torino, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Daghino</LastName><ForeName>Stefania</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lanfranco</LastName><ForeName>Luisa</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Department of Life Science and Systems Biology, University of Torino, via Accademia Albertina 13, 10123, Torino, Italy.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>04</Month><Day>13</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>Mycorrhiza</MedlineTA><NlmUniqueID>100955036</NlmUniqueID><ISSNLinking>0940-6360</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005656">Fungal Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>147336-22-9</RegistryNumber><NameOfSubstance UI="D049452">Green Fluorescent Proteins</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D005656" MajorTopicYN="N">Fungal Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015966" MajorTopicYN="N">Gene Expression Regulation, Fungal</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D055137" MajorTopicYN="N">Glomeromycota</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D049452" MajorTopicYN="N">Green Fluorescent Proteins</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D046913" MajorTopicYN="N">Medicago truncatula</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015003" MajorTopicYN="N">Yeasts</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Arbuscular mycorrhizal symbiosis</Keyword><Keyword MajorTopicYN="N">Heterologous expression system</Keyword><Keyword MajorTopicYN="N">Oidiodendron maius</Keyword><Keyword MajorTopicYN="N">Rhizophagus irregularis</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>01</Month><Day>12</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2016</Year><Month>04</Month><Day>05</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2016</Year><Month>4</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2016</Year><Month>4</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>2</Month><Day>18</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">27075897</ArticleId><ArticleId 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