Changes in richness and community composition of ectomycorrhizal fungi among altitudinal vegetation types on Mount Kinabalu in Borneo.
Identifieur interne : 000D09 ( Main/Corpus ); précédent : 000D08; suivant : 000D10Changes in richness and community composition of ectomycorrhizal fungi among altitudinal vegetation types on Mount Kinabalu in Borneo.
Auteurs : J Zsef Geml ; Luis N. Morgado ; Tatiana A. Semenova-Nelsen ; Menno SchilthuizenSource :
- The New phytologist [ 1469-8137 ] ; 2017.
English descriptors
- KwdEn :
- MESH :
- classification : Mycorrhizae.
- genetics : Mycorrhizae.
- physiology : Mycorrhizae.
- Biodiversity, Borneo, Environment, Sequence Analysis, DNA.
Abstract
The distribution patterns of tropical ectomycorrhizal (ECM) fungi along altitudinal gradients remain largely unknown. Furthermore, despite being an iconic site for biodiversity research, virtually nothing is known about the diversity and spatial patterns of fungi on Mt Kinabalu and neighbouring mountain ranges. We carried out deep DNA sequencing of soil samples collected between 425 and 4000 m above sea level to compare richness and community composition of ECM fungi among altitudinal forest types in Borneo. In addition, we tested whether the observed patterns are driven by habitat or by geometric effect of overlapping ranges of species (mid-domain effect). Community composition of ECM fungi was strongly correlated with elevation. In most genera, richness peaked in the mid-elevation montane forest zone, with the exception of tomentelloid fungi, which showed monotonal decrease in richness with increasing altitude. Richness in lower-mid- and mid-elevations was significantly greater than predicted under the mid-domain effect model. We provide the first insight into the composition of ECM fungal communities and their strong altitudinal turnover in Borneo. The high richness and restricted distribution of many ECM fungi in the montane forests suggest that mid-elevation peak richness is primarily driven by environmental characteristics of this habitat and not by the mid-domain effect.
DOI: 10.1111/nph.14566
PubMed: 28401981
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Morgado</name><affiliation><nlm:affiliation>Biodiversity Dynamics Research Group, Naturalis Biodiversity Center, Vondellaan 55, PO Box 9517, 2300 RA, Leiden, the Netherlands.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Section for Genetics and Evolutionary Biology, Department of Biosciences, University of Oslo, PO Box 1066 Blindern, 0316, Oslo, Norway.</nlm:affiliation></affiliation></author><author><name sortKey="Semenova Nelsen, Tatiana A" sort="Semenova Nelsen, Tatiana A" uniqKey="Semenova Nelsen T" first="Tatiana A" last="Semenova-Nelsen">Tatiana A. Semenova-Nelsen</name><affiliation><nlm:affiliation>Biodiversity Dynamics Research Group, Naturalis Biodiversity Center, Vondellaan 55, PO Box 9517, 2300 RA, Leiden, the Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Schilthuizen, Menno" sort="Schilthuizen, Menno" uniqKey="Schilthuizen M" first="Menno" last="Schilthuizen">Menno Schilthuizen</name><affiliation><nlm:affiliation>Biodiversity Dynamics Research Group, Naturalis Biodiversity Center, Vondellaan 55, PO Box 9517, 2300 RA, Leiden, the Netherlands.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Institute for Tropical Biology and Conservation, Universiti Malaysia Sabah, Jalan UMS, 88400, Kota Kinabalu, Sabah, Malaysia.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2017">2017</date><idno type="RBID">pubmed:28401981</idno><idno type="pmid">28401981</idno><idno type="doi">10.1111/nph.14566</idno><idno type="wicri:Area/Main/Corpus">000D09</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000D09</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Changes in richness and community composition of ectomycorrhizal fungi among altitudinal vegetation types on Mount Kinabalu in Borneo.</title><author><name sortKey="Geml, J Zsef" sort="Geml, J Zsef" uniqKey="Geml J" first="J Zsef" last="Geml">J Zsef Geml</name><affiliation><nlm:affiliation>Biodiversity Dynamics Research Group, Naturalis Biodiversity Center, Vondellaan 55, PO Box 9517, 2300 RA, Leiden, the Netherlands.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Faculty of Science, Leiden University, PO Box 9502, 2300 RA, Leiden, the Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Morgado, Luis N" sort="Morgado, Luis N" uniqKey="Morgado L" first="Luis N" last="Morgado">Luis N. Morgado</name><affiliation><nlm:affiliation>Biodiversity Dynamics Research Group, Naturalis Biodiversity Center, Vondellaan 55, PO Box 9517, 2300 RA, Leiden, the Netherlands.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Section for Genetics and Evolutionary Biology, Department of Biosciences, University of Oslo, PO Box 1066 Blindern, 0316, Oslo, Norway.</nlm:affiliation></affiliation></author><author><name sortKey="Semenova Nelsen, Tatiana A" sort="Semenova Nelsen, Tatiana A" uniqKey="Semenova Nelsen T" first="Tatiana A" last="Semenova-Nelsen">Tatiana A. Semenova-Nelsen</name><affiliation><nlm:affiliation>Biodiversity Dynamics Research Group, Naturalis Biodiversity Center, Vondellaan 55, PO Box 9517, 2300 RA, Leiden, the Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Schilthuizen, Menno" sort="Schilthuizen, Menno" uniqKey="Schilthuizen M" first="Menno" last="Schilthuizen">Menno Schilthuizen</name><affiliation><nlm:affiliation>Biodiversity Dynamics Research Group, Naturalis Biodiversity Center, Vondellaan 55, PO Box 9517, 2300 RA, Leiden, the Netherlands.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Institute for Tropical Biology and Conservation, Universiti Malaysia Sabah, Jalan UMS, 88400, Kota Kinabalu, Sabah, Malaysia.</nlm:affiliation></affiliation></author></analytic><series><title level="j">The New phytologist</title><idno type="eISSN">1469-8137</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Biodiversity (MeSH)</term><term>Borneo (MeSH)</term><term>Environment (MeSH)</term><term>Mycorrhizae (classification)</term><term>Mycorrhizae (genetics)</term><term>Mycorrhizae (physiology)</term><term>Sequence Analysis, DNA (MeSH)</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Biodiversity</term><term>Borneo</term><term>Environment</term><term>Sequence Analysis, DNA</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The distribution patterns of tropical ectomycorrhizal (ECM) fungi along altitudinal gradients remain largely unknown. Furthermore, despite being an iconic site for biodiversity research, virtually nothing is known about the diversity and spatial patterns of fungi on Mt Kinabalu and neighbouring mountain ranges. We carried out deep DNA sequencing of soil samples collected between 425 and 4000 m above sea level to compare richness and community composition of ECM fungi among altitudinal forest types in Borneo. In addition, we tested whether the observed patterns are driven by habitat or by geometric effect of overlapping ranges of species (mid-domain effect). Community composition of ECM fungi was strongly correlated with elevation. In most genera, richness peaked in the mid-elevation montane forest zone, with the exception of tomentelloid fungi, which showed monotonal decrease in richness with increasing altitude. Richness in lower-mid- and mid-elevations was significantly greater than predicted under the mid-domain effect model. We provide the first insight into the composition of ECM fungal communities and their strong altitudinal turnover in Borneo. The high richness and restricted distribution of many ECM fungi in the montane forests suggest that mid-elevation peak richness is primarily driven by environmental characteristics of this habitat and not by the mid-domain effect.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">28401981</PMID><DateCompleted><Year>2018</Year><Month>05</Month><Day>01</Day></DateCompleted><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1469-8137</ISSN><JournalIssue CitedMedium="Internet"><Volume>215</Volume><Issue>1</Issue><PubDate><Year>2017</Year><Month>Jul</Month></PubDate></JournalIssue><Title>The New phytologist</Title><ISOAbbreviation>New Phytol</ISOAbbreviation></Journal><ArticleTitle>Changes in richness and community composition of ectomycorrhizal fungi among altitudinal vegetation types on Mount Kinabalu in Borneo.</ArticleTitle><Pagination><MedlinePgn>454-468</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/nph.14566</ELocationID><Abstract><AbstractText>The distribution patterns of tropical ectomycorrhizal (ECM) fungi along altitudinal gradients remain largely unknown. Furthermore, despite being an iconic site for biodiversity research, virtually nothing is known about the diversity and spatial patterns of fungi on Mt Kinabalu and neighbouring mountain ranges. We carried out deep DNA sequencing of soil samples collected between 425 and 4000 m above sea level to compare richness and community composition of ECM fungi among altitudinal forest types in Borneo. In addition, we tested whether the observed patterns are driven by habitat or by geometric effect of overlapping ranges of species (mid-domain effect). Community composition of ECM fungi was strongly correlated with elevation. In most genera, richness peaked in the mid-elevation montane forest zone, with the exception of tomentelloid fungi, which showed monotonal decrease in richness with increasing altitude. Richness in lower-mid- and mid-elevations was significantly greater than predicted under the mid-domain effect model. We provide the first insight into the composition of ECM fungal communities and their strong altitudinal turnover in Borneo. The high richness and restricted distribution of many ECM fungi in the montane forests suggest that mid-elevation peak richness is primarily driven by environmental characteristics of this habitat and not by the mid-domain effect.</AbstractText><CopyrightInformation>© 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Geml</LastName><ForeName>József</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Biodiversity Dynamics Research Group, Naturalis Biodiversity Center, Vondellaan 55, PO Box 9517, 2300 RA, Leiden, the Netherlands.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Faculty of Science, Leiden University, PO Box 9502, 2300 RA, Leiden, the Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Morgado</LastName><ForeName>Luis N</ForeName><Initials>LN</Initials><AffiliationInfo><Affiliation>Biodiversity Dynamics Research Group, Naturalis Biodiversity Center, Vondellaan 55, PO Box 9517, 2300 RA, Leiden, the Netherlands.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Section for Genetics and Evolutionary Biology, Department of Biosciences, University of Oslo, PO Box 1066 Blindern, 0316, Oslo, 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