Host- and stage-dependent secretome of the arbuscular mycorrhizal fungus Rhizophagus irregularis.
Identifieur interne : 000943 ( Main/Corpus ); précédent : 000942; suivant : 000944Host- and stage-dependent secretome of the arbuscular mycorrhizal fungus Rhizophagus irregularis.
Auteurs : Tian Zeng ; Rens Holmer ; Jan Hontelez ; Bas Te Lintel-Hekkert ; Lucky Marufu ; Thijs De Zeeuw ; Fangyuan Wu ; Elio Schijlen ; Ton Bisseling ; Erik LimpensSource :
- The Plant journal : for cell and molecular biology [ 1365-313X ] ; 2018.
English descriptors
- KwdEn :
- Chive (genetics), Chive (microbiology), Fungal Proteins (genetics), Fungal Proteins (metabolism), Gene Expression Regulation, Fungal (genetics), Gene Expression Regulation, Fungal (physiology), Genes, Fungal (genetics), Genes, Plant (genetics), Genes, Plant (physiology), Host-Pathogen Interactions (MeSH), Medicago truncatula (genetics), Medicago truncatula (microbiology), Mycorrhizae (genetics), Mycorrhizae (metabolism), Mycorrhizae (physiology), Symbiosis (MeSH), Tobacco (genetics), Tobacco (microbiology).
- MESH :
- chemical , genetics : Fungal Proteins.
- genetics : Chive, Gene Expression Regulation, Fungal, Genes, Fungal, Genes, Plant, Medicago truncatula, Mycorrhizae, Tobacco.
- chemical , metabolism : Fungal Proteins, Mycorrhizae.
- microbiology : Chive, Medicago truncatula, Tobacco.
- physiology : Gene Expression Regulation, Fungal, Genes, Plant, Mycorrhizae.
- Host-Pathogen Interactions, Symbiosis.
Abstract
Arbuscular mycorrhizal fungi form the most wide-spread endosymbiosis with plants. There is very little host specificity in this interaction, however host preferences as well as varying symbiotic efficiencies have been observed. We hypothesize that secreted proteins (SPs) may act as fungal effectors to control symbiotic efficiency in a host-dependent manner. Therefore, we studied whether arbuscular mycorrhizal (AM) fungi adjust their secretome in a host- and stage-dependent manner to contribute to their extremely wide host range. We investigated the expression of SP-encoding genes of Rhizophagus irregularis in three evolutionary distantly related plant species, Medicago truncatula, Nicotiana benthamiana and Allium schoenoprasum. In addition we used laser microdissection in combination with RNA-seq to study SP expression at different stages of the interaction in Medicago. Our data indicate that most expressed SPs show roughly equal expression levels in the interaction with all three host plants. In addition, a subset shows significant differential expression depending on the host plant. Furthermore, SP expression is controlled locally in the hyphal network in response to host-dependent cues. Overall, this study presents a comprehensive analysis of the R. irregularis secretome, which now offers a solid basis to direct functional studies on the role of fungal SPs in AM symbiosis.
DOI: 10.1111/tpj.13908
PubMed: 29570877
Links to Exploration step
pubmed:29570877Le document en format XML
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Holmer</name><affiliation><nlm:affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Bioinformatics group, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Hontelez, Jan" sort="Hontelez, Jan" uniqKey="Hontelez J" first="Jan" last="Hontelez">Jan Hontelez</name><affiliation><nlm:affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Te Lintel Hekkert, Bas" sort="Te Lintel Hekkert, Bas" uniqKey="Te Lintel Hekkert B" first="Bas" last="Te Lintel-Hekkert">Bas Te Lintel-Hekkert</name><affiliation><nlm:affiliation>Bioscience, Plant Research International, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Marufu, Lucky" sort="Marufu, Lucky" uniqKey="Marufu L" first="Lucky" last="Marufu">Lucky Marufu</name><affiliation><nlm:affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="De Zeeuw, Thijs" sort="De Zeeuw, Thijs" uniqKey="De Zeeuw T" first="Thijs" last="De Zeeuw">Thijs De Zeeuw</name><affiliation><nlm:affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Wu, Fangyuan" sort="Wu, Fangyuan" uniqKey="Wu F" first="Fangyuan" last="Wu">Fangyuan Wu</name><affiliation><nlm:affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Schijlen, Elio" sort="Schijlen, Elio" uniqKey="Schijlen E" first="Elio" last="Schijlen">Elio Schijlen</name><affiliation><nlm:affiliation>Bioscience, Plant Research International, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Bisseling, Ton" sort="Bisseling, Ton" uniqKey="Bisseling T" first="Ton" last="Bisseling">Ton Bisseling</name><affiliation><nlm:affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation></author><author><name sortKey="Limpens, Erik" sort="Limpens, Erik" uniqKey="Limpens E" first="Erik" last="Limpens">Erik Limpens</name><affiliation><nlm:affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</nlm:affiliation></affiliation></author></analytic><series><title level="j">The Plant journal : for cell and molecular biology</title><idno type="eISSN">1365-313X</idno><imprint><date when="2018" type="published">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Chive (genetics)</term><term>Chive (microbiology)</term><term>Fungal Proteins (genetics)</term><term>Fungal Proteins (metabolism)</term><term>Gene Expression Regulation, Fungal (genetics)</term><term>Gene Expression Regulation, Fungal (physiology)</term><term>Genes, Fungal (genetics)</term><term>Genes, Plant (genetics)</term><term>Genes, Plant (physiology)</term><term>Host-Pathogen Interactions (MeSH)</term><term>Medicago truncatula (genetics)</term><term>Medicago truncatula (microbiology)</term><term>Mycorrhizae (genetics)</term><term>Mycorrhizae (metabolism)</term><term>Mycorrhizae (physiology)</term><term>Symbiosis (MeSH)</term><term>Tobacco (genetics)</term><term>Tobacco (microbiology)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Fungal Proteins</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Chive</term><term>Gene Expression Regulation, Fungal</term><term>Genes, Fungal</term><term>Genes, Plant</term><term>Medicago truncatula</term><term>Mycorrhizae</term><term>Tobacco</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Fungal Proteins</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Chive</term><term>Medicago truncatula</term><term>Tobacco</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Gene Expression Regulation, Fungal</term><term>Genes, Plant</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Host-Pathogen Interactions</term><term>Symbiosis</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Arbuscular mycorrhizal fungi form the most wide-spread endosymbiosis with plants. There is very little host specificity in this interaction, however host preferences as well as varying symbiotic efficiencies have been observed. We hypothesize that secreted proteins (SPs) may act as fungal effectors to control symbiotic efficiency in a host-dependent manner. Therefore, we studied whether arbuscular mycorrhizal (AM) fungi adjust their secretome in a host- and stage-dependent manner to contribute to their extremely wide host range. We investigated the expression of SP-encoding genes of Rhizophagus irregularis in three evolutionary distantly related plant species, Medicago truncatula, Nicotiana benthamiana and Allium schoenoprasum. In addition we used laser microdissection in combination with RNA-seq to study SP expression at different stages of the interaction in Medicago. Our data indicate that most expressed SPs show roughly equal expression levels in the interaction with all three host plants. In addition, a subset shows significant differential expression depending on the host plant. Furthermore, SP expression is controlled locally in the hyphal network in response to host-dependent cues. Overall, this study presents a comprehensive analysis of the R. irregularis secretome, which now offers a solid basis to direct functional studies on the role of fungal SPs in AM symbiosis.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">29570877</PMID><DateCompleted><Year>2019</Year><Month>04</Month><Day>09</Day></DateCompleted><DateRevised><Year>2019</Year><Month>04</Month><Day>09</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1365-313X</ISSN><JournalIssue CitedMedium="Internet"><Volume>94</Volume><Issue>3</Issue><PubDate><Year>2018</Year><Month>05</Month></PubDate></JournalIssue><Title>The Plant journal : for cell and molecular biology</Title><ISOAbbreviation>Plant J</ISOAbbreviation></Journal><ArticleTitle>Host- and stage-dependent secretome of the arbuscular mycorrhizal fungus Rhizophagus irregularis.</ArticleTitle><Pagination><MedlinePgn>411-425</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/tpj.13908</ELocationID><Abstract><AbstractText>Arbuscular mycorrhizal fungi form the most wide-spread endosymbiosis with plants. There is very little host specificity in this interaction, however host preferences as well as varying symbiotic efficiencies have been observed. We hypothesize that secreted proteins (SPs) may act as fungal effectors to control symbiotic efficiency in a host-dependent manner. Therefore, we studied whether arbuscular mycorrhizal (AM) fungi adjust their secretome in a host- and stage-dependent manner to contribute to their extremely wide host range. We investigated the expression of SP-encoding genes of Rhizophagus irregularis in three evolutionary distantly related plant species, Medicago truncatula, Nicotiana benthamiana and Allium schoenoprasum. In addition we used laser microdissection in combination with RNA-seq to study SP expression at different stages of the interaction in Medicago. Our data indicate that most expressed SPs show roughly equal expression levels in the interaction with all three host plants. In addition, a subset shows significant differential expression depending on the host plant. Furthermore, SP expression is controlled locally in the hyphal network in response to host-dependent cues. Overall, this study presents a comprehensive analysis of the R. irregularis secretome, which now offers a solid basis to direct functional studies on the role of fungal SPs in AM symbiosis.</AbstractText><CopyrightInformation>© 2018 The Authors The Plant Journal © 2018 John Wiley & Sons Ltd.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zeng</LastName><ForeName>Tian</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Holmer</LastName><ForeName>Rens</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Bioinformatics group, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hontelez</LastName><ForeName>Jan</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Te Lintel-Hekkert</LastName><ForeName>Bas</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>Bioscience, Plant Research International, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Marufu</LastName><ForeName>Lucky</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>de Zeeuw</LastName><ForeName>Thijs</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wu</LastName><ForeName>Fangyuan</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Schijlen</LastName><ForeName>Elio</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Bioscience, Plant Research International, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bisseling</LastName><ForeName>Ton</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Limpens</LastName><ForeName>Erik</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Laboratory of Molecular Biology, Department of Plant Sciences, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, The Netherlands.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Plant J</MedlineTA><NlmUniqueID>9207397</NlmUniqueID><ISSNLinking>0960-7412</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005656">Fungal Proteins</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="CommentIn"><RefSource>Plant J. 2018 May;94(3):409-410</RefSource><PMID Version="1">29664560</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D027782" MajorTopicYN="N">Chive</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005656" MajorTopicYN="N">Fungal Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015966" MajorTopicYN="Y">Gene Expression Regulation, Fungal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005800" MajorTopicYN="N">Genes, Fungal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D054884" MajorTopicYN="N">Host-Pathogen Interactions</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D046913" MajorTopicYN="N">Medicago truncatula</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013559" MajorTopicYN="Y">Symbiosis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014026" MajorTopicYN="N">Tobacco</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">Rhizophagus irregularis
</Keyword><Keyword MajorTopicYN="Y">RNA-seq</Keyword><Keyword MajorTopicYN="Y">arbuscular mycorrhiza</Keyword><Keyword MajorTopicYN="Y">effector</Keyword><Keyword MajorTopicYN="Y">host dependency</Keyword><Keyword MajorTopicYN="Y">laser microdissection</Keyword><Keyword MajorTopicYN="Y">secretome</Keyword><Keyword MajorTopicYN="Y">symbiosis</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>09</Month><Day>04</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2018</Year><Month>01</Month><Day>17</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2018</Year><Month>02</Month><Day>16</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2018</Year><Month>3</Month><Day>24</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2019</Year><Month>4</Month><Day>10</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2018</Year><Month>3</Month><Day>24</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">29570877</ArticleId><ArticleId IdType="doi">10.1111/tpj.13908</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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