Succession in arbuscular mycorrhizal fungi can be attributed to a chronosequence of Cunninghamia lanceolata.
Identifieur interne : 000234 ( Main/Corpus ); précédent : 000233; suivant : 000235Succession in arbuscular mycorrhizal fungi can be attributed to a chronosequence of Cunninghamia lanceolata.
Auteurs : Nini Lu ; Xuelei Xu ; Ping Wang ; Peng Zhang ; Baoming Ji ; Xinjie WangSource :
- Scientific reports [ 2045-2322 ] ; 2019.
English descriptors
- KwdEn :
- Cunninghamia (microbiology), Cunninghamia (physiology), DNA, Fungal (isolation & purification), High-Throughput Nucleotide Sequencing (MeSH), Host Microbial Interactions (physiology), Mycobiome (physiology), Mycorrhizae (physiology), Plant Roots (microbiology), Sequence Analysis, DNA (MeSH), Soil (chemistry), Soil Microbiology (MeSH), Time Factors (MeSH).
- MESH :
- chemical , chemistry : Soil.
- chemical , isolation & purification : DNA, Fungal.
- microbiology : Cunninghamia, Plant Roots.
- physiology : Cunninghamia, Host Microbial Interactions, Mycobiome, Mycorrhizae.
- High-Throughput Nucleotide Sequencing, Sequence Analysis, DNA, Soil Microbiology, Time Factors.
Abstract
Arbuscular mycorrhizal (AM) fungi play an important role in plant-fungi communities. It remains a central question of how the AM fungal community changes as plants grow. To establish an understanding of AM fungal community dynamics associated with Chinese fir, Chinese fir with five different growth stages were studied and 60 root samples were collected at the Jiangle National Forestry Farm, Fujian Province. A total of 76 AM fungal operational taxonomic units (OTUs) were identified by high-throughput sequencing on an Illumina Miseq platform. The genera covered by OTUs were Glomus, Archaeospora, Acaulospora, Gigaspora and Diversispora. Glomus dominated the community in the whole stage. The number and composition of OTUs varied along with the host plant growth. The number of OTUs showed an inverted V-shaped change with the host plant age, and the maximum occurred in 23-year. Overall, the basic species diversity and richness in this study were stable. Non-metric multi-dimensional scaling (NMDS) analysis based on bray-curtis distance revealed that there were remarkable differentiations between the 9-year and other stages. Besides, AM fungal community in 32-year had a significant difference with that of 23-year, while no significant difference with that of 45-year, suggesting that 32-year may be a steady stage for AM fungi associated with Chinese fir. The cutting age in 32-year may be the most favorable for microbial community. The pH, total N, total P, total K, available N, available P, available K, organic matter and Mg varied as the Chinese fir grows. According to Mantel test and redundancy analysis, available N, available P, K and Mg could exert significant influence on AM fungal communities, and these variables explained 31% of variance in the composition of AM fungal communities.
DOI: 10.1038/s41598-019-54452-z
PubMed: 31792242
PubMed Central: PMC6889488
Links to Exploration step
pubmed:31792242Le document en format XML
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and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation></author><author><name sortKey="Wang, Ping" sort="Wang, Ping" uniqKey="Wang P" first="Ping" last="Wang">Ping Wang</name><affiliation><nlm:affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation></author><author><name sortKey="Zhang, Peng" sort="Zhang, Peng" uniqKey="Zhang P" first="Peng" last="Zhang">Peng Zhang</name><affiliation><nlm:affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry 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Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation></author><author><name sortKey="Xu, Xuelei" sort="Xu, Xuelei" uniqKey="Xu X" first="Xuelei" last="Xu">Xuelei Xu</name><affiliation><nlm:affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation></author><author><name sortKey="Wang, Ping" sort="Wang, Ping" uniqKey="Wang P" first="Ping" last="Wang">Ping Wang</name><affiliation><nlm:affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation></author><author><name sortKey="Zhang, Peng" sort="Zhang, Peng" uniqKey="Zhang P" first="Peng" last="Zhang">Peng Zhang</name><affiliation><nlm:affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Experimental Forest Farm, Beijing Forestry University, Beijing, 100095, China.</nlm:affiliation></affiliation></author><author><name sortKey="Ji, Baoming" sort="Ji, Baoming" uniqKey="Ji B" first="Baoming" last="Ji">Baoming Ji</name><affiliation><nlm:affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</nlm:affiliation></affiliation></author><author><name sortKey="Wang, Xinjie" sort="Wang, Xinjie" uniqKey="Wang X" first="Xinjie" last="Wang">Xinjie Wang</name><affiliation><nlm:affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China. xinjiew@bjfu.edu.cn.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China. xinjiew@bjfu.edu.cn.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Scientific reports</title><idno type="eISSN">2045-2322</idno><imprint><date when="2019" type="published">2019</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Cunninghamia (microbiology)</term><term>Cunninghamia (physiology)</term><term>DNA, Fungal (isolation & purification)</term><term>High-Throughput Nucleotide Sequencing (MeSH)</term><term>Host Microbial Interactions (physiology)</term><term>Mycobiome (physiology)</term><term>Mycorrhizae (physiology)</term><term>Plant Roots (microbiology)</term><term>Sequence Analysis, DNA (MeSH)</term><term>Soil (chemistry)</term><term>Soil Microbiology (MeSH)</term><term>Time Factors (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Soil</term></keywords><keywords scheme="MESH" type="chemical" qualifier="isolation & purification" xml:lang="en"><term>DNA, Fungal</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Cunninghamia</term><term>Plant Roots</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Cunninghamia</term><term>Host Microbial Interactions</term><term>Mycobiome</term><term>Mycorrhizae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>High-Throughput Nucleotide Sequencing</term><term>Sequence Analysis, DNA</term><term>Soil Microbiology</term><term>Time Factors</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Arbuscular mycorrhizal (AM) fungi play an important role in plant-fungi communities. It remains a central question of how the AM fungal community changes as plants grow. To establish an understanding of AM fungal community dynamics associated with Chinese fir, Chinese fir with five different growth stages were studied and 60 root samples were collected at the Jiangle National Forestry Farm, Fujian Province. A total of 76 AM fungal operational taxonomic units (OTUs) were identified by high-throughput sequencing on an Illumina Miseq platform. The genera covered by OTUs were Glomus, Archaeospora, Acaulospora, Gigaspora and Diversispora. Glomus dominated the community in the whole stage. The number and composition of OTUs varied along with the host plant growth. The number of OTUs showed an inverted V-shaped change with the host plant age, and the maximum occurred in 23-year. Overall, the basic species diversity and richness in this study were stable. Non-metric multi-dimensional scaling (NMDS) analysis based on bray-curtis distance revealed that there were remarkable differentiations between the 9-year and other stages. Besides, AM fungal community in 32-year had a significant difference with that of 23-year, while no significant difference with that of 45-year, suggesting that 32-year may be a steady stage for AM fungi associated with Chinese fir. The cutting age in 32-year may be the most favorable for microbial community. The pH, total N, total P, total K, available N, available P, available K, organic matter and Mg varied as the Chinese fir grows. According to Mantel test and redundancy analysis, available N, available P, K and Mg could exert significant influence on AM fungal communities, and these variables explained 31% of variance in the composition of AM fungal communities.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">31792242</PMID><DateCompleted><Year>2020</Year><Month>11</Month><Day>11</Day></DateCompleted><DateRevised><Year>2020</Year><Month>11</Month><Day>11</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">2045-2322</ISSN><JournalIssue CitedMedium="Internet"><Volume>9</Volume><Issue>1</Issue><PubDate><Year>2019</Year><Month>12</Month><Day>02</Day></PubDate></JournalIssue><Title>Scientific reports</Title><ISOAbbreviation>Sci Rep</ISOAbbreviation></Journal><ArticleTitle>Succession in arbuscular mycorrhizal fungi can be attributed to a chronosequence of Cunninghamia lanceolata.</ArticleTitle><Pagination><MedlinePgn>18057</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1038/s41598-019-54452-z</ELocationID><Abstract><AbstractText>Arbuscular mycorrhizal (AM) fungi play an important role in plant-fungi communities. It remains a central question of how the AM fungal community changes as plants grow. To establish an understanding of AM fungal community dynamics associated with Chinese fir, Chinese fir with five different growth stages were studied and 60 root samples were collected at the Jiangle National Forestry Farm, Fujian Province. A total of 76 AM fungal operational taxonomic units (OTUs) were identified by high-throughput sequencing on an Illumina Miseq platform. The genera covered by OTUs were Glomus, Archaeospora, Acaulospora, Gigaspora and Diversispora. Glomus dominated the community in the whole stage. The number and composition of OTUs varied along with the host plant growth. The number of OTUs showed an inverted V-shaped change with the host plant age, and the maximum occurred in 23-year. Overall, the basic species diversity and richness in this study were stable. Non-metric multi-dimensional scaling (NMDS) analysis based on bray-curtis distance revealed that there were remarkable differentiations between the 9-year and other stages. Besides, AM fungal community in 32-year had a significant difference with that of 23-year, while no significant difference with that of 45-year, suggesting that 32-year may be a steady stage for AM fungi associated with Chinese fir. The cutting age in 32-year may be the most favorable for microbial community. The pH, total N, total P, total K, available N, available P, available K, organic matter and Mg varied as the Chinese fir grows. According to Mantel test and redundancy analysis, available N, available P, K and Mg could exert significant influence on AM fungal communities, and these variables explained 31% of variance in the composition of AM fungal communities.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Lu</LastName><ForeName>Nini</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xu</LastName><ForeName>Xuelei</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Ping</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Peng</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Experimental Forest Farm, Beijing Forestry University, Beijing, 100095, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ji</LastName><ForeName>Baoming</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Xinjie</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>College of Forestry, Beijing Forestry University, Beijing, 100083, China. xinjiew@bjfu.edu.cn.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory for Silviculture and Conservation Joint-constructed by Province and Ministry of Education, Beijing Forestry University, Beijing, 100083, China. 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