Crop types have stronger effects on soil microbial communities and functionalities than biochar or fertilizer during two cycles of legume-cereal rotations of dry land.
Identifieur interne : 000177 ( Main/Corpus ); précédent : 000176; suivant : 000178Crop types have stronger effects on soil microbial communities and functionalities than biochar or fertilizer during two cycles of legume-cereal rotations of dry land.
Auteurs : Muhammad Azeem ; Daquan Sun ; David Crowley ; Rifat Hayat ; Qaiser Hussain ; Amjad Ali ; Muhammad Ibrahim Tahir ; Parimala Gnana Soundari Arockiam Jeyasundar ; Jörg Rinklebe ; Zengqiang ZhangSource :
- The Science of the total environment [ 1879-1026 ] ; 2020.
English descriptors
- KwdEn :
- MESH :
- chemical : Charcoal, Fertilizers, RNA, Ribosomal, 16S, Soil.
- Edible Grain, Fabaceae, Microbiota, Soil Microbiology.
Abstract
The addition of biochar to agricultural fields has been widely studied, but most of these studies have emphasized its effects by growing a single type of crop over short- to long-term time spans. Additionally, a limited number of studies have focused on the soil microbial community composition with respect to biochar addition in legume-cereal crop rotation. In this study, we examined soil microbial community structures by adding biochar (0, 5, and 10 t ha-1) and fertilizer (nitrogen-N, phosphorous-P and potassium-K) during 2 cycles of mash bean and wheat rotations. The results showed that the bacterial (16S rRNA) gene abundance was often increased by biochar addition in the presence of mash bean (Vigna mungo L.) but not wheat. When the soil received fertilizer, the bacterial gene abundance was less responsive to biochar addition. Fungal (ITS rRNA) copy numbers were enhanced by biochar and fertilizer in presence of wheat but were decreased in the presence of mash bean. Fertilizer addition also resulted in less change in ITS genes after biochar addition. Microbial functional groups including Gram+, Gram- and Pseudomonas bacteria were stimulated by biochar or fertilizer only in mash bean soils, while mycorrhizae were significantly increased by biochar in wheat soils. Although biochar addition affected soil properties, microbial community assays were not greatly altered by these physicochemical properties. In conclusion, the crop type played a decisive role, rather than biochar or fertilizer addition, in shaping microbial community structures (16S and ITS phyla) during crop rotation.
DOI: 10.1016/j.scitotenv.2020.136958
PubMed: 32032990
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pubmed:32032990Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Crop types have stronger effects on soil microbial communities and functionalities than biochar or fertilizer during two cycles of legume-cereal rotations of dry land.</title><author><name sortKey="Azeem, Muhammad" sort="Azeem, Muhammad" uniqKey="Azeem M" first="Muhammad" last="Azeem">Muhammad Azeem</name><affiliation><nlm:affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China; Department of Environmental Sciences, University of California, Riverside, CA 92507, USA; Institute of Soil Science, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46300, Pakistan.</nlm:affiliation></affiliation></author><author><name sortKey="Sun, Daquan" sort="Sun, Daquan" uniqKey="Sun D" first="Daquan" last="Sun">Daquan Sun</name><affiliation><nlm:affiliation>Biology Center, Institute of Soil Biology & SoWa Research Infrastructure, Czech Academy of Science, Na Sadkach 7, Ceske Budejovice, CZ 37005, Czech Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Crowley, David" sort="Crowley, David" uniqKey="Crowley D" first="David" last="Crowley">David Crowley</name><affiliation><nlm:affiliation>Department of Environmental Sciences, University of California, Riverside, CA 92507, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Hayat, Rifat" sort="Hayat, Rifat" uniqKey="Hayat R" first="Rifat" last="Hayat">Rifat Hayat</name><affiliation><nlm:affiliation>Institute of Soil Science, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46300, Pakistan.</nlm:affiliation></affiliation></author><author><name sortKey="Hussain, Qaiser" sort="Hussain, Qaiser" uniqKey="Hussain Q" first="Qaiser" last="Hussain">Qaiser Hussain</name><affiliation><nlm:affiliation>Institute of Soil Science, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46300, Pakistan.</nlm:affiliation></affiliation></author><author><name sortKey="Ali, Amjad" sort="Ali, Amjad" uniqKey="Ali A" first="Amjad" last="Ali">Amjad Ali</name><affiliation><nlm:affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China.</nlm:affiliation></affiliation></author><author><name sortKey="Tahir, Muhammad Ibrahim" sort="Tahir, Muhammad Ibrahim" uniqKey="Tahir M" first="Muhammad Ibrahim" last="Tahir">Muhammad Ibrahim Tahir</name><affiliation><nlm:affiliation>Department of Agriculture, Hazara University, Mansehra 21120, Pakistan.</nlm:affiliation></affiliation></author><author><name sortKey="Jeyasundar, Parimala Gnana Soundari Arockiam" sort="Jeyasundar, Parimala Gnana Soundari Arockiam" uniqKey="Jeyasundar P" first="Parimala Gnana Soundari Arockiam" last="Jeyasundar">Parimala Gnana Soundari Arockiam Jeyasundar</name><affiliation><nlm:affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China.</nlm:affiliation></affiliation></author><author><name sortKey="Rinklebe, Jorg" sort="Rinklebe, Jorg" uniqKey="Rinklebe J" first="Jörg" last="Rinklebe">Jörg Rinklebe</name><affiliation><nlm:affiliation>University of Wuppertal, School of Architecture and Civil Engineering, Institute of Foundation Engineering, Water and Waste-Management, Laboratory of Soil and Groundwater-Management, Pauluskirchstraße 7, 42285 Wuppertal, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Zhang, Zengqiang" sort="Zhang, Zengqiang" uniqKey="Zhang Z" first="Zengqiang" last="Zhang">Zengqiang Zhang</name><affiliation><nlm:affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China. Electronic address: zhangzq58@126.com.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2020">2020</date><idno type="RBID">pubmed:32032990</idno><idno type="pmid">32032990</idno><idno type="doi">10.1016/j.scitotenv.2020.136958</idno><idno type="wicri:Area/Main/Corpus">000177</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000177</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Crop types have stronger effects on soil microbial communities and functionalities than biochar or fertilizer during two cycles of legume-cereal rotations of dry land.</title><author><name sortKey="Azeem, Muhammad" sort="Azeem, Muhammad" uniqKey="Azeem M" first="Muhammad" last="Azeem">Muhammad Azeem</name><affiliation><nlm:affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China; Department of Environmental Sciences, University of California, Riverside, CA 92507, USA; Institute of Soil Science, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46300, Pakistan.</nlm:affiliation></affiliation></author><author><name sortKey="Sun, Daquan" sort="Sun, Daquan" uniqKey="Sun D" first="Daquan" last="Sun">Daquan Sun</name><affiliation><nlm:affiliation>Biology Center, Institute of Soil Biology & SoWa Research Infrastructure, Czech Academy of Science, Na Sadkach 7, Ceske Budejovice, CZ 37005, Czech Republic.</nlm:affiliation></affiliation></author><author><name sortKey="Crowley, David" sort="Crowley, David" uniqKey="Crowley D" first="David" last="Crowley">David Crowley</name><affiliation><nlm:affiliation>Department of Environmental Sciences, University of California, Riverside, CA 92507, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Hayat, Rifat" sort="Hayat, Rifat" uniqKey="Hayat R" first="Rifat" last="Hayat">Rifat Hayat</name><affiliation><nlm:affiliation>Institute of Soil Science, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46300, Pakistan.</nlm:affiliation></affiliation></author><author><name sortKey="Hussain, Qaiser" sort="Hussain, Qaiser" uniqKey="Hussain Q" first="Qaiser" last="Hussain">Qaiser Hussain</name><affiliation><nlm:affiliation>Institute of Soil Science, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46300, Pakistan.</nlm:affiliation></affiliation></author><author><name sortKey="Ali, Amjad" sort="Ali, Amjad" uniqKey="Ali A" first="Amjad" last="Ali">Amjad Ali</name><affiliation><nlm:affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China.</nlm:affiliation></affiliation></author><author><name sortKey="Tahir, Muhammad Ibrahim" sort="Tahir, Muhammad Ibrahim" uniqKey="Tahir M" first="Muhammad Ibrahim" last="Tahir">Muhammad Ibrahim Tahir</name><affiliation><nlm:affiliation>Department of Agriculture, Hazara University, Mansehra 21120, Pakistan.</nlm:affiliation></affiliation></author><author><name sortKey="Jeyasundar, Parimala Gnana Soundari Arockiam" sort="Jeyasundar, Parimala Gnana Soundari Arockiam" uniqKey="Jeyasundar P" first="Parimala Gnana Soundari Arockiam" last="Jeyasundar">Parimala Gnana Soundari Arockiam Jeyasundar</name><affiliation><nlm:affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China.</nlm:affiliation></affiliation></author><author><name sortKey="Rinklebe, Jorg" sort="Rinklebe, Jorg" uniqKey="Rinklebe J" first="Jörg" last="Rinklebe">Jörg Rinklebe</name><affiliation><nlm:affiliation>University of Wuppertal, School of Architecture and Civil Engineering, Institute of Foundation Engineering, Water and Waste-Management, Laboratory of Soil and Groundwater-Management, Pauluskirchstraße 7, 42285 Wuppertal, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Zhang, Zengqiang" sort="Zhang, Zengqiang" uniqKey="Zhang Z" first="Zengqiang" last="Zhang">Zengqiang Zhang</name><affiliation><nlm:affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China. Electronic address: zhangzq58@126.com.</nlm:affiliation></affiliation></author></analytic><series><title level="j">The Science of the total environment</title><idno type="eISSN">1879-1026</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Charcoal (MeSH)</term><term>Edible Grain (MeSH)</term><term>Fabaceae (MeSH)</term><term>Fertilizers (MeSH)</term><term>Microbiota (MeSH)</term><term>RNA, Ribosomal, 16S (MeSH)</term><term>Soil (MeSH)</term><term>Soil Microbiology (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Charcoal</term><term>Fertilizers</term><term>RNA, Ribosomal, 16S</term><term>Soil</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Edible Grain</term><term>Fabaceae</term><term>Microbiota</term><term>Soil Microbiology</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The addition of biochar to agricultural fields has been widely studied, but most of these studies have emphasized its effects by growing a single type of crop over short- to long-term time spans. Additionally, a limited number of studies have focused on the soil microbial community composition with respect to biochar addition in legume-cereal crop rotation. In this study, we examined soil microbial community structures by adding biochar (0, 5, and 10 t ha<sup>-</sup><sup>1</sup>) and fertilizer (nitrogen-N, phosphorous-P and potassium-K) during 2 cycles of mash bean and wheat rotations. The results showed that the bacterial (16S rRNA) gene abundance was often increased by biochar addition in the presence of mash bean (Vigna mungo L.) but not wheat. When the soil received fertilizer, the bacterial gene abundance was less responsive to biochar addition. Fungal (ITS rRNA) copy numbers were enhanced by biochar and fertilizer in presence of wheat but were decreased in the presence of mash bean. Fertilizer addition also resulted in less change in ITS genes after biochar addition. Microbial functional groups including Gram<sup>+</sup>, Gram<sup>-</sup> and Pseudomonas bacteria were stimulated by biochar or fertilizer only in mash bean soils, while mycorrhizae were significantly increased by biochar in wheat soils. Although biochar addition affected soil properties, microbial community assays were not greatly altered by these physicochemical properties. In conclusion, the crop type played a decisive role, rather than biochar or fertilizer addition, in shaping microbial community structures (16S and ITS phyla) during crop rotation.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">32032990</PMID><DateCompleted><Year>2020</Year><Month>04</Month><Day>06</Day></DateCompleted><DateRevised><Year>2020</Year><Month>04</Month><Day>08</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1879-1026</ISSN><JournalIssue CitedMedium="Internet"><Volume>715</Volume><PubDate><Year>2020</Year><Month>May</Month><Day>01</Day></PubDate></JournalIssue><Title>The Science of the total environment</Title><ISOAbbreviation>Sci Total Environ</ISOAbbreviation></Journal><ArticleTitle>Crop types have stronger effects on soil microbial communities and functionalities than biochar or fertilizer during two cycles of legume-cereal rotations of dry land.</ArticleTitle><Pagination><MedlinePgn>136958</MedlinePgn></Pagination><ELocationID EIdType="pii" ValidYN="Y">S0048-9697(20)30468-X</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.scitotenv.2020.136958</ELocationID><Abstract><AbstractText>The addition of biochar to agricultural fields has been widely studied, but most of these studies have emphasized its effects by growing a single type of crop over short- to long-term time spans. Additionally, a limited number of studies have focused on the soil microbial community composition with respect to biochar addition in legume-cereal crop rotation. In this study, we examined soil microbial community structures by adding biochar (0, 5, and 10 t ha<sup>-</sup><sup>1</sup>) and fertilizer (nitrogen-N, phosphorous-P and potassium-K) during 2 cycles of mash bean and wheat rotations. The results showed that the bacterial (16S rRNA) gene abundance was often increased by biochar addition in the presence of mash bean (Vigna mungo L.) but not wheat. When the soil received fertilizer, the bacterial gene abundance was less responsive to biochar addition. Fungal (ITS rRNA) copy numbers were enhanced by biochar and fertilizer in presence of wheat but were decreased in the presence of mash bean. Fertilizer addition also resulted in less change in ITS genes after biochar addition. Microbial functional groups including Gram<sup>+</sup>, Gram<sup>-</sup> and Pseudomonas bacteria were stimulated by biochar or fertilizer only in mash bean soils, while mycorrhizae were significantly increased by biochar in wheat soils. Although biochar addition affected soil properties, microbial community assays were not greatly altered by these physicochemical properties. In conclusion, the crop type played a decisive role, rather than biochar or fertilizer addition, in shaping microbial community structures (16S and ITS phyla) during crop rotation.</AbstractText><CopyrightInformation>Copyright © 2020 Elsevier B.V. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Azeem</LastName><ForeName>Muhammad</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China; Department of Environmental Sciences, University of California, Riverside, CA 92507, USA; Institute of Soil Science, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46300, Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sun</LastName><ForeName>Daquan</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Biology Center, Institute of Soil Biology & SoWa Research Infrastructure, Czech Academy of Science, Na Sadkach 7, Ceske Budejovice, CZ 37005, Czech Republic.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Crowley</LastName><ForeName>David</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Department of Environmental Sciences, University of California, Riverside, CA 92507, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hayat</LastName><ForeName>Rifat</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Institute of Soil Science, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46300, Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hussain</LastName><ForeName>Qaiser</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>Institute of Soil Science, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi 46300, Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ali</LastName><ForeName>Amjad</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tahir</LastName><ForeName>Muhammad Ibrahim</ForeName><Initials>MI</Initials><AffiliationInfo><Affiliation>Department of Agriculture, Hazara University, Mansehra 21120, Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jeyasundar</LastName><ForeName>Parimala Gnana Soundari Arockiam</ForeName><Initials>PGSA</Initials><AffiliationInfo><Affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rinklebe</LastName><ForeName>Jörg</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>University of Wuppertal, School of Architecture and Civil Engineering, Institute of Foundation Engineering, Water and Waste-Management, Laboratory of Soil and Groundwater-Management, Pauluskirchstraße 7, 42285 Wuppertal, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Zengqiang</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>College of Natural Resources and Environment, Northwest A & F University, Yangling, Shaanxi 712100, PR China. Electronic address: zhangzq58@126.com.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>01</Month><Day>27</Day></ArticleDate></Article><MedlineJournalInfo><Country>Netherlands</Country><MedlineTA>Sci Total Environ</MedlineTA><NlmUniqueID>0330500</NlmUniqueID><ISSNLinking>0048-9697</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005308">Fertilizers</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012336">RNA, Ribosomal, 16S</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012987">Soil</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="C540010">biochar</NameOfSubstance></Chemical><Chemical><RegistryNumber>16291-96-6</RegistryNumber><NameOfSubstance UI="D002606">Charcoal</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D002606" MajorTopicYN="N">Charcoal</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002523" MajorTopicYN="N">Edible Grain</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007887" MajorTopicYN="Y">Fabaceae</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005308" MajorTopicYN="N">Fertilizers</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D064307" MajorTopicYN="Y">Microbiota</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012336" MajorTopicYN="N">RNA, Ribosomal, 16S</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012987" MajorTopicYN="N">Soil</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="N">Soil Microbiology</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">AMF</Keyword><Keyword MajorTopicYN="N">Biochar</Keyword><Keyword MajorTopicYN="N">Legume-cereal rotation</Keyword><Keyword MajorTopicYN="N">Microbial communities</Keyword><Keyword MajorTopicYN="N">PLFA</Keyword><Keyword MajorTopicYN="N">Second generation sequencing</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2019</Year><Month>09</Month><Day>25</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2020</Year><Month>01</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2020</Year><Month>01</Month><Day>25</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>2</Month><Day>9</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>4</Month><Day>9</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>2</Month><Day>9</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">32032990</ArticleId><ArticleId IdType="pii">S0048-9697(20)30468-X</ArticleId><ArticleId IdType="doi">10.1016/j.scitotenv.2020.136958</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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