Arbuscular mycorrhizal and microbial profiles of an aged phenol-polynuclear aromatic hydrocarbon-contaminated soil.
Identifieur interne : 000168 ( Main/Corpus ); précédent : 000167; suivant : 000169Arbuscular mycorrhizal and microbial profiles of an aged phenol-polynuclear aromatic hydrocarbon-contaminated soil.
Auteurs : Monika Malicka ; Franco Magurno ; Zofia Piotrowska-Seget ; Damian ChmuraSource :
- Ecotoxicology and environmental safety [ 1090-2414 ] ; 2020.
English descriptors
- KwdEn :
- Biodiversity (MeSH), Biomass (MeSH), Host Specificity (MeSH), Mycorrhizae (classification), Mycorrhizae (genetics), Mycorrhizae (growth & development), Mycorrhizae (isolation & purification), Phenol (analysis), Poaceae (classification), Poaceae (microbiology), Polycyclic Aromatic Hydrocarbons (analysis), Soil (chemistry), Soil Microbiology (MeSH), Soil Pollutants (analysis).
- MESH :
- chemical , analysis : Phenol, Polycyclic Aromatic Hydrocarbons, Soil Pollutants.
- chemical , chemistry : Soil.
- classification : Mycorrhizae, Poaceae.
- genetics : Mycorrhizae.
- growth & development : Mycorrhizae.
- isolation & purification : Mycorrhizae.
- microbiology : Poaceae.
- Biodiversity, Biomass, Host Specificity, Soil Microbiology.
Abstract
Arbuscular mycorrhizal fungi (AMF) are ubiquitous, obligatory plant symbionts that have a beneficial influence on plants in contaminated environments. This study focused on evaluating the biomass and biodiversity of the AMF and microbial communities associated with Poa trivialis and Phragmites australis plants sampled at an aged site contaminated with phenol and polynuclear aromatic hydrocarbons (PAHs) and an uncontaminated control site. We analyzed the soil phospholipid fatty acid profile to describe the general structure of microbial communities. PCR-denaturing gradient gel electrophoresis with primers targeting the 18S ribosomal RNA gene was used to characterize the biodiversity of the AMF communities and identify dominant AMF species associated with the host plants in the polluted and control environments. The root mycorrhizal colonization and AMF biomass in the soil were negatively affected by the presence of PAHs and phenol, with no significant differences between the studied plant species, whereas the biodiversity of the AMF communities were influenced by the soil contamination and plant species. Soil contamination was more detrimental to the biodiversity of AMF communities associated with Ph. australis, compared to P. trivialis. Both species favored the development of different AMF species, which might be related to the specific features of their different root systems and soil microbial communities. The contaminated site was dominated by AMF generalists like Funneliformis and Rhizophagus, whereas in the control site Dominikia, Archaeospora, Claroideoglomus, Glomus, and Diversispora were also detected.
DOI: 10.1016/j.ecoenv.2020.110299
PubMed: 32058165
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pubmed:32058165Le document en format XML
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Electronic address: monika.malicka@us.edu.pl.</nlm:affiliation></affiliation></author><author><name sortKey="Magurno, Franco" sort="Magurno, Franco" uniqKey="Magurno F" first="Franco" last="Magurno">Franco Magurno</name><affiliation><nlm:affiliation>Institute of Biology Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia, Jagiellońska 28 Street, 40-032, Katowice, Poland.</nlm:affiliation></affiliation></author><author><name sortKey="Piotrowska Seget, Zofia" sort="Piotrowska Seget, Zofia" uniqKey="Piotrowska Seget Z" first="Zofia" last="Piotrowska-Seget">Zofia Piotrowska-Seget</name><affiliation><nlm:affiliation>Institute of Biology Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia, Jagiellońska 28 Street, 40-032, Katowice, Poland.</nlm:affiliation></affiliation></author><author><name sortKey="Chmura, Damian" sort="Chmura, Damian" uniqKey="Chmura D" first="Damian" last="Chmura">Damian Chmura</name><affiliation><nlm:affiliation>Institute of Environmental Protection and Engineering, University of Bielsko-Biala, 2 Willowa Street, 43-309 Bielsko-Biała, Poland.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2020">2020</date><idno type="RBID">pubmed:32058165</idno><idno type="pmid">32058165</idno><idno type="doi">10.1016/j.ecoenv.2020.110299</idno><idno type="wicri:Area/Main/Corpus">000168</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000168</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Arbuscular mycorrhizal and microbial profiles of an aged phenol-polynuclear aromatic hydrocarbon-contaminated soil.</title><author><name sortKey="Malicka, Monika" sort="Malicka, Monika" uniqKey="Malicka M" first="Monika" last="Malicka">Monika Malicka</name><affiliation><nlm:affiliation>Institute of Biology Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia, Jagiellońska 28 Street, 40-032, Katowice, Poland. Electronic address: monika.malicka@us.edu.pl.</nlm:affiliation></affiliation></author><author><name sortKey="Magurno, Franco" sort="Magurno, Franco" uniqKey="Magurno F" first="Franco" last="Magurno">Franco Magurno</name><affiliation><nlm:affiliation>Institute of Biology Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia, Jagiellońska 28 Street, 40-032, Katowice, Poland.</nlm:affiliation></affiliation></author><author><name sortKey="Piotrowska Seget, Zofia" sort="Piotrowska Seget, Zofia" uniqKey="Piotrowska Seget Z" first="Zofia" last="Piotrowska-Seget">Zofia Piotrowska-Seget</name><affiliation><nlm:affiliation>Institute of Biology Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia, Jagiellońska 28 Street, 40-032, Katowice, Poland.</nlm:affiliation></affiliation></author><author><name sortKey="Chmura, Damian" sort="Chmura, Damian" uniqKey="Chmura D" first="Damian" last="Chmura">Damian Chmura</name><affiliation><nlm:affiliation>Institute of Environmental Protection and Engineering, University of Bielsko-Biala, 2 Willowa Street, 43-309 Bielsko-Biała, Poland.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Ecotoxicology and environmental safety</title><idno type="eISSN">1090-2414</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Biodiversity (MeSH)</term><term>Biomass (MeSH)</term><term>Host Specificity (MeSH)</term><term>Mycorrhizae (classification)</term><term>Mycorrhizae (genetics)</term><term>Mycorrhizae (growth & development)</term><term>Mycorrhizae (isolation & purification)</term><term>Phenol (analysis)</term><term>Poaceae (classification)</term><term>Poaceae (microbiology)</term><term>Polycyclic Aromatic Hydrocarbons (analysis)</term><term>Soil (chemistry)</term><term>Soil Microbiology (MeSH)</term><term>Soil Pollutants (analysis)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>Phenol</term><term>Polycyclic Aromatic Hydrocarbons</term><term>Soil Pollutants</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Soil</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Mycorrhizae</term><term>Poaceae</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Mycorrhizae</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Poaceae</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Biodiversity</term><term>Biomass</term><term>Host Specificity</term><term>Soil Microbiology</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Arbuscular mycorrhizal fungi (AMF) are ubiquitous, obligatory plant symbionts that have a beneficial influence on plants in contaminated environments. This study focused on evaluating the biomass and biodiversity of the AMF and microbial communities associated with Poa trivialis and Phragmites australis plants sampled at an aged site contaminated with phenol and polynuclear aromatic hydrocarbons (PAHs) and an uncontaminated control site. We analyzed the soil phospholipid fatty acid profile to describe the general structure of microbial communities. PCR-denaturing gradient gel electrophoresis with primers targeting the 18S ribosomal RNA gene was used to characterize the biodiversity of the AMF communities and identify dominant AMF species associated with the host plants in the polluted and control environments. The root mycorrhizal colonization and AMF biomass in the soil were negatively affected by the presence of PAHs and phenol, with no significant differences between the studied plant species, whereas the biodiversity of the AMF communities were influenced by the soil contamination and plant species. Soil contamination was more detrimental to the biodiversity of AMF communities associated with Ph. australis, compared to P. trivialis. Both species favored the development of different AMF species, which might be related to the specific features of their different root systems and soil microbial communities. The contaminated site was dominated by AMF generalists like Funneliformis and Rhizophagus, whereas in the control site Dominikia, Archaeospora, Claroideoglomus, Glomus, and Diversispora were also detected.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">32058165</PMID><DateCompleted><Year>2020</Year><Month>05</Month><Day>01</Day></DateCompleted><DateRevised><Year>2020</Year><Month>05</Month><Day>01</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1090-2414</ISSN><JournalIssue CitedMedium="Internet"><Volume>192</Volume><PubDate><Year>2020</Year><Month>Apr</Month><Day>01</Day></PubDate></JournalIssue><Title>Ecotoxicology and environmental safety</Title><ISOAbbreviation>Ecotoxicol Environ Saf</ISOAbbreviation></Journal><ArticleTitle>Arbuscular mycorrhizal and microbial profiles of an aged phenol-polynuclear aromatic hydrocarbon-contaminated soil.</ArticleTitle><Pagination><MedlinePgn>110299</MedlinePgn></Pagination><ELocationID EIdType="pii" ValidYN="Y">S0147-6513(20)30138-X</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.ecoenv.2020.110299</ELocationID><Abstract><AbstractText>Arbuscular mycorrhizal fungi (AMF) are ubiquitous, obligatory plant symbionts that have a beneficial influence on plants in contaminated environments. This study focused on evaluating the biomass and biodiversity of the AMF and microbial communities associated with Poa trivialis and Phragmites australis plants sampled at an aged site contaminated with phenol and polynuclear aromatic hydrocarbons (PAHs) and an uncontaminated control site. We analyzed the soil phospholipid fatty acid profile to describe the general structure of microbial communities. PCR-denaturing gradient gel electrophoresis with primers targeting the 18S ribosomal RNA gene was used to characterize the biodiversity of the AMF communities and identify dominant AMF species associated with the host plants in the polluted and control environments. The root mycorrhizal colonization and AMF biomass in the soil were negatively affected by the presence of PAHs and phenol, with no significant differences between the studied plant species, whereas the biodiversity of the AMF communities were influenced by the soil contamination and plant species. Soil contamination was more detrimental to the biodiversity of AMF communities associated with Ph. australis, compared to P. trivialis. Both species favored the development of different AMF species, which might be related to the specific features of their different root systems and soil microbial communities. The contaminated site was dominated by AMF generalists like Funneliformis and Rhizophagus, whereas in the control site Dominikia, Archaeospora, Claroideoglomus, Glomus, and Diversispora were also detected.</AbstractText><CopyrightInformation>Copyright © 2020 Elsevier Inc. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Malicka</LastName><ForeName>Monika</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Institute of Biology Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia, Jagiellońska 28 Street, 40-032, Katowice, Poland. 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Bielsko-Biała, Poland.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>02</Month><Day>10</Day></ArticleDate></Article><MedlineJournalInfo><Country>Netherlands</Country><MedlineTA>Ecotoxicol Environ Saf</MedlineTA><NlmUniqueID>7805381</NlmUniqueID><ISSNLinking>0147-6513</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D011084">Polycyclic Aromatic Hydrocarbons</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012987">Soil</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012989">Soil Pollutants</NameOfSubstance></Chemical><Chemical><RegistryNumber>339NCG44TV</RegistryNumber><NameOfSubstance 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MajorTopicYN="Y">analysis</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D006109" MajorTopicYN="N">Poaceae</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011084" MajorTopicYN="N">Polycyclic Aromatic Hydrocarbons</DescriptorName><QualifierName UI="Q000032" MajorTopicYN="Y">analysis</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012987" MajorTopicYN="N">Soil</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="Y">Soil Microbiology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012989" MajorTopicYN="N">Soil Pollutants</DescriptorName><QualifierName UI="Q000032" MajorTopicYN="Y">analysis</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword 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