Serveur d'exploration Melampsora (ISTEX)

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

[Specific molecular markers of the rust resistance gene M4 in flax].

Identifieur interne : 000183 ( PubMed/Corpus ); précédent : 000182; suivant : 000184

[Specific molecular markers of the rust resistance gene M4 in flax].

Auteurs : Tian-Yue Bo ; Hua-Zhi Ye ; Shi-Quan Wang ; Jian-Chun Yang ; Xiao-Bing Li ; Wen-Xue Zhai

Source :

RBID : pubmed:12561479

English descriptors

Abstract

Flax (Linum usitatissimum L.) is an important fiber and oil-producing crop. Flax rust, caused by Melampsora lini Ehrenb. Lev., occurs worldwide and can cause severe losses in seed yield and fiber quality. In order to identify molecular markers linked to the flax rust resistant gene M4, RAPD analysis of NM4, a near-isogenic line containing the M4 gene, and the recurrent parent Bison was carried out with 540 decamer primers. The primer OPA18 could stably amplify a specific fragment, OPA18(432), in the NM4 line. The OPA18(432) marker was testified to be closely linked to the M4 gene with a genetic distance of 2.1 cM through the analysis of the F2 mapping population derived from a cross of Bison x NM4. Based on the sequence of OPA18(432), the specific PCR primers were designed, and a SCAR marker for the M4 gene was produced. Amplification of different resistant materials proved that the maker is specific for the M4 gene. This marker has been used successfully in marker-assisted selection in the flax breeding program.

PubMed: 12561479

Links to Exploration step

pubmed:12561479

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">[Specific molecular markers of the rust resistance gene M4 in flax].</title>
<author>
<name sortKey="Bo, Tian Yue" sort="Bo, Tian Yue" uniqKey="Bo T" first="Tian-Yue" last="Bo">Tian-Yue Bo</name>
<affiliation>
<nlm:affiliation>Cold Region Crop Research Institute, Shanxi Academy of Agricultural Sciences, Datong 037008, China.</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Ye, Hua Zhi" sort="Ye, Hua Zhi" uniqKey="Ye H" first="Hua-Zhi" last="Ye">Hua-Zhi Ye</name>
</author>
<author>
<name sortKey="Wang, Shi Quan" sort="Wang, Shi Quan" uniqKey="Wang S" first="Shi-Quan" last="Wang">Shi-Quan Wang</name>
</author>
<author>
<name sortKey="Yang, Jian Chun" sort="Yang, Jian Chun" uniqKey="Yang J" first="Jian-Chun" last="Yang">Jian-Chun Yang</name>
</author>
<author>
<name sortKey="Li, Xiao Bing" sort="Li, Xiao Bing" uniqKey="Li X" first="Xiao-Bing" last="Li">Xiao-Bing Li</name>
</author>
<author>
<name sortKey="Zhai, Wen Xue" sort="Zhai, Wen Xue" uniqKey="Zhai W" first="Wen-Xue" last="Zhai">Wen-Xue Zhai</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2002">2002</date>
<idno type="RBID">pubmed:12561479</idno>
<idno type="pmid">12561479</idno>
<idno type="wicri:Area/PubMed/Corpus">000183</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000183</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">[Specific molecular markers of the rust resistance gene M4 in flax].</title>
<author>
<name sortKey="Bo, Tian Yue" sort="Bo, Tian Yue" uniqKey="Bo T" first="Tian-Yue" last="Bo">Tian-Yue Bo</name>
<affiliation>
<nlm:affiliation>Cold Region Crop Research Institute, Shanxi Academy of Agricultural Sciences, Datong 037008, China.</nlm:affiliation>
</affiliation>
</author>
<author>
<name sortKey="Ye, Hua Zhi" sort="Ye, Hua Zhi" uniqKey="Ye H" first="Hua-Zhi" last="Ye">Hua-Zhi Ye</name>
</author>
<author>
<name sortKey="Wang, Shi Quan" sort="Wang, Shi Quan" uniqKey="Wang S" first="Shi-Quan" last="Wang">Shi-Quan Wang</name>
</author>
<author>
<name sortKey="Yang, Jian Chun" sort="Yang, Jian Chun" uniqKey="Yang J" first="Jian-Chun" last="Yang">Jian-Chun Yang</name>
</author>
<author>
<name sortKey="Li, Xiao Bing" sort="Li, Xiao Bing" uniqKey="Li X" first="Xiao-Bing" last="Li">Xiao-Bing Li</name>
</author>
<author>
<name sortKey="Zhai, Wen Xue" sort="Zhai, Wen Xue" uniqKey="Zhai W" first="Wen-Xue" last="Zhai">Wen-Xue Zhai</name>
</author>
</analytic>
<series>
<title level="j">Yi chuan xue bao = Acta genetica Sinica</title>
<idno type="ISSN">0379-4172</idno>
<imprint>
<date when="2002" type="published">2002</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Base Sequence (MeSH)</term>
<term>Basidiomycota (growth & development)</term>
<term>Crosses, Genetic (MeSH)</term>
<term>DNA Restriction Enzymes (metabolism)</term>
<term>DNA, Plant (genetics)</term>
<term>DNA, Plant (metabolism)</term>
<term>Flax (genetics)</term>
<term>Flax (microbiology)</term>
<term>Genes, Plant (genetics)</term>
<term>Genetic Markers (MeSH)</term>
<term>Immunity, Innate (genetics)</term>
<term>Molecular Sequence Data (MeSH)</term>
<term>Plant Diseases (genetics)</term>
<term>Plant Diseases (microbiology)</term>
<term>Random Amplified Polymorphic DNA Technique (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en">
<term>DNA, Plant</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en">
<term>DNA Restriction Enzymes</term>
<term>DNA, Plant</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Flax</term>
<term>Genes, Plant</term>
<term>Immunity, Innate</term>
<term>Plant Diseases</term>
</keywords>
<keywords scheme="MESH" qualifier="growth & development" xml:lang="en">
<term>Basidiomycota</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en">
<term>Flax</term>
<term>Plant Diseases</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Base Sequence</term>
<term>Crosses, Genetic</term>
<term>Genetic Markers</term>
<term>Molecular Sequence Data</term>
<term>Random Amplified Polymorphic DNA Technique</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Flax (Linum usitatissimum L.) is an important fiber and oil-producing crop. Flax rust, caused by Melampsora lini Ehrenb. Lev., occurs worldwide and can cause severe losses in seed yield and fiber quality. In order to identify molecular markers linked to the flax rust resistant gene M4, RAPD analysis of NM4, a near-isogenic line containing the M4 gene, and the recurrent parent Bison was carried out with 540 decamer primers. The primer OPA18 could stably amplify a specific fragment, OPA18(432), in the NM4 line. The OPA18(432) marker was testified to be closely linked to the M4 gene with a genetic distance of 2.1 cM through the analysis of the F2 mapping population derived from a cross of Bison x NM4. Based on the sequence of OPA18(432), the specific PCR primers were designed, and a SCAR marker for the M4 gene was produced. Amplification of different resistant materials proved that the maker is specific for the M4 gene. This marker has been used successfully in marker-assisted selection in the flax breeding program.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="MEDLINE" Owner="NLM">
<PMID Version="1">12561479</PMID>
<DateCompleted>
<Year>2003</Year>
<Month>06</Month>
<Day>23</Day>
</DateCompleted>
<DateRevised>
<Year>2008</Year>
<Month>11</Month>
<Day>21</Day>
</DateRevised>
<Article PubModel="Print">
<Journal>
<ISSN IssnType="Print">0379-4172</ISSN>
<JournalIssue CitedMedium="Print">
<Volume>29</Volume>
<Issue>10</Issue>
<PubDate>
<Year>2002</Year>
<Month>Oct</Month>
</PubDate>
</JournalIssue>
<Title>Yi chuan xue bao = Acta genetica Sinica</Title>
<ISOAbbreviation>Yi Chuan Xue Bao</ISOAbbreviation>
</Journal>
<ArticleTitle>[Specific molecular markers of the rust resistance gene M4 in flax].</ArticleTitle>
<Pagination>
<MedlinePgn>922-7</MedlinePgn>
</Pagination>
<Abstract>
<AbstractText>Flax (Linum usitatissimum L.) is an important fiber and oil-producing crop. Flax rust, caused by Melampsora lini Ehrenb. Lev., occurs worldwide and can cause severe losses in seed yield and fiber quality. In order to identify molecular markers linked to the flax rust resistant gene M4, RAPD analysis of NM4, a near-isogenic line containing the M4 gene, and the recurrent parent Bison was carried out with 540 decamer primers. The primer OPA18 could stably amplify a specific fragment, OPA18(432), in the NM4 line. The OPA18(432) marker was testified to be closely linked to the M4 gene with a genetic distance of 2.1 cM through the analysis of the F2 mapping population derived from a cross of Bison x NM4. Based on the sequence of OPA18(432), the specific PCR primers were designed, and a SCAR marker for the M4 gene was produced. Amplification of different resistant materials proved that the maker is specific for the M4 gene. This marker has been used successfully in marker-assisted selection in the flax breeding program.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Bo</LastName>
<ForeName>Tian-Yue</ForeName>
<Initials>TY</Initials>
<AffiliationInfo>
<Affiliation>Cold Region Crop Research Institute, Shanxi Academy of Agricultural Sciences, Datong 037008, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Ye</LastName>
<ForeName>Hua-Zhi</ForeName>
<Initials>HZ</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Wang</LastName>
<ForeName>Shi-Quan</ForeName>
<Initials>SQ</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Yang</LastName>
<ForeName>Jian-Chun</ForeName>
<Initials>JC</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Li</LastName>
<ForeName>Xiao-Bing</ForeName>
<Initials>XB</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Zhai</LastName>
<ForeName>Wen-Xue</ForeName>
<Initials>WX</Initials>
</Author>
</AuthorList>
<Language>chi</Language>
<PublicationTypeList>
<PublicationType UI="D004740">English Abstract</PublicationType>
<PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
</Article>
<MedlineJournalInfo>
<Country>China</Country>
<MedlineTA>Yi Chuan Xue Bao</MedlineTA>
<NlmUniqueID>7900784</NlmUniqueID>
<ISSNLinking>0379-4172</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D018744">DNA, Plant</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D005819">Genetic Markers</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>EC 3.1.21.-</RegistryNumber>
<NameOfSubstance UI="D004262">DNA Restriction Enzymes</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D001483" MajorTopicYN="N">Base Sequence</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D001487" MajorTopicYN="N">Basidiomycota</DescriptorName>
<QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D003433" MajorTopicYN="N">Crosses, Genetic</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D004262" MajorTopicYN="N">DNA Restriction Enzymes</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D018744" MajorTopicYN="N">DNA, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D019597" MajorTopicYN="N">Flax</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D005819" MajorTopicYN="N">Genetic Markers</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D007113" MajorTopicYN="N">Immunity, Innate</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D019105" MajorTopicYN="N">Random Amplified Polymorphic DNA Technique</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="pubmed">
<Year>2003</Year>
<Month>2</Month>
<Day>4</Day>
<Hour>4</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2003</Year>
<Month>6</Month>
<Day>24</Day>
<Hour>5</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2003</Year>
<Month>2</Month>
<Day>4</Day>
<Hour>4</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">12561479</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/MelampsoraV2/Data/PubMed/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000183 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd -nk 000183 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    MelampsoraV2
   |flux=    PubMed
   |étape=   Corpus
   |type=    RBID
   |clé=     pubmed:12561479
   |texte=   [Specific molecular markers of the rust resistance gene M4 in flax].
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/RBID.i   -Sk "pubmed:12561479" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd   \
       | NlmPubMed2Wicri -a MelampsoraV2 

Wicri

This area was generated with Dilib version V0.6.38.
Data generation: Tue Nov 24 19:18:52 2020. Site generation: Tue Nov 24 19:22:33 2020