Melampsora rust species on biomass willows in central and north-eastern Germany.
Identifieur interne : 000070 ( PubMed/Corpus ); précédent : 000069; suivant : 000071Melampsora rust species on biomass willows in central and north-eastern Germany.
Auteurs : Ben Bubner ; Sebastian Wunder ; Irmtraut Zaspel ; Matthias Zander ; Jan Gloger ; Steffen Fehrenz ; Christian UlrichsSource :
- Fungal biology [ 1878-6146 ] ; 2014.
English descriptors
- KwdEn :
- Basidiomycota (classification), Basidiomycota (genetics), Basidiomycota (isolation & purification), Cluster Analysis (MeSH), DNA, Fungal (chemistry), DNA, Fungal (genetics), DNA, Ribosomal Spacer (chemistry), DNA, Ribosomal Spacer (genetics), Germany (MeSH), Molecular Sequence Data (MeSH), Phylogeography (MeSH), Plant Diseases (microbiology), Salix (microbiology), Sequence Analysis, DNA (MeSH).
- MESH :
- chemical , chemistry : DNA, Fungal, DNA, Ribosomal Spacer.
- geographic : Germany.
- classification : Basidiomycota.
- genetics : Basidiomycota, DNA, Fungal, DNA, Ribosomal Spacer.
- isolation & purification : Basidiomycota.
- microbiology : Plant Diseases, Salix.
- Cluster Analysis, Molecular Sequence Data, Phylogeography, Sequence Analysis, DNA.
Abstract
Melampsora willow rusts are the most important fungal pathogens in short rotation coppices of biomass willows. In the past, breeding programmes for rust resistant biomass willows concentrated on the distinction of races within the forma specialis Melampsora larici-epitea f. sp. larici-epitea typica that colonized Salix viminalis and related clones. In a new breeding program that is based on a wider range of willow species it is necessary to identify further Melampsora species and formae specialis that are pathogens of willow species other than S. viminalis. Therefore, three stock collections with Salix daphnoides, Salix purpurea, and other shrub willow species (including S. viminalis) species were sampled in north-eastern Germany. A fourth stock collection in central Germany contributed rusts of tree willows (Salix fragilis and Salix alba) and the large shrub Salix caprea. Out of 156 rust samples, 149 were successfully sequenced for ITS rDNA. A phylogenetic analysis combining Neighbour-Joining, Maximum-Likelihood and Bayesian analysis revealed six species: Melampsora ribesii-purpureae, Melampsora allii-salicis-albae, Melampsora sp. aff. allii-fragilis, Melampsora larici-pentandrae, Melampsora larici-caprearum, and Melampsora larici-epitea. The first four species were found exclusively on the expected hosts. Melampsora larici-caprearum had a wider host range comprising S. caprea and S. viminalis hybrids. Melampsora larici-epitea can be further differentiated into two formae speciales. The forma specialis larici-epitea typica (59 samples) colonized Salix viminalis clones, Salix purpurea, Salix×dasyclados, and Salix×aquatica. In contrast to this relatively broad host range, f. sp. larici-daphnoides (65 samples) was found exclusively on Salix daphnoides. With the distinction and identification of the rust species/formae speciales it is now possible to test for race-specific resistances in a more targeted manner within the determined pairings of rust and willow species.
DOI: 10.1016/j.funbio.2014.08.002
PubMed: 25442294
Links to Exploration step
pubmed:25442294Le document en format XML
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In the past, breeding programmes for rust resistant biomass willows concentrated on the distinction of races within the forma specialis Melampsora larici-epitea f. sp. larici-epitea typica that colonized Salix viminalis and related clones. In a new breeding program that is based on a wider range of willow species it is necessary to identify further Melampsora species and formae specialis that are pathogens of willow species other than S. viminalis. Therefore, three stock collections with Salix daphnoides, Salix purpurea, and other shrub willow species (including S. viminalis) species were sampled in north-eastern Germany. A fourth stock collection in central Germany contributed rusts of tree willows (Salix fragilis and Salix alba) and the large shrub Salix caprea. Out of 156 rust samples, 149 were successfully sequenced for ITS rDNA. A phylogenetic analysis combining Neighbour-Joining, Maximum-Likelihood and Bayesian analysis revealed six species: Melampsora ribesii-purpureae, Melampsora allii-salicis-albae, Melampsora sp. aff. allii-fragilis, Melampsora larici-pentandrae, Melampsora larici-caprearum, and Melampsora larici-epitea. The first four species were found exclusively on the expected hosts. Melampsora larici-caprearum had a wider host range comprising S. caprea and S. viminalis hybrids. Melampsora larici-epitea can be further differentiated into two formae speciales. The forma specialis larici-epitea typica (59 samples) colonized Salix viminalis clones, Salix purpurea, Salix×dasyclados, and Salix×aquatica. In contrast to this relatively broad host range, f. sp. larici-daphnoides (65 samples) was found exclusively on Salix daphnoides. With the distinction and identification of the rust species/formae speciales it is now possible to test for race-specific resistances in a more targeted manner within the determined pairings of rust and willow species. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">25442294</PMID><DateCompleted><Year>2015</Year><Month>07</Month><Day>08</Day></DateCompleted><DateRevised><Year>2014</Year><Month>12</Month><Day>02</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">1878-6146</ISSN><JournalIssue CitedMedium="Internet"><Volume>118</Volume><Issue>11</Issue><PubDate><Year>2014</Year><Month>Nov</Month></PubDate></JournalIssue><Title>Fungal biology</Title><ISOAbbreviation>Fungal Biol</ISOAbbreviation></Journal><ArticleTitle>Melampsora rust species on biomass willows in central and north-eastern Germany.</ArticleTitle><Pagination><MedlinePgn>910-23</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.funbio.2014.08.002</ELocationID><ELocationID EIdType="pii" ValidYN="Y">S1878-6146(14)00122-6</ELocationID><Abstract><AbstractText>Melampsora willow rusts are the most important fungal pathogens in short rotation coppices of biomass willows. In the past, breeding programmes for rust resistant biomass willows concentrated on the distinction of races within the forma specialis Melampsora larici-epitea f. sp. larici-epitea typica that colonized Salix viminalis and related clones. In a new breeding program that is based on a wider range of willow species it is necessary to identify further Melampsora species and formae specialis that are pathogens of willow species other than S. viminalis. Therefore, three stock collections with Salix daphnoides, Salix purpurea, and other shrub willow species (including S. viminalis) species were sampled in north-eastern Germany. A fourth stock collection in central Germany contributed rusts of tree willows (Salix fragilis and Salix alba) and the large shrub Salix caprea. Out of 156 rust samples, 149 were successfully sequenced for ITS rDNA. A phylogenetic analysis combining Neighbour-Joining, Maximum-Likelihood and Bayesian analysis revealed six species: Melampsora ribesii-purpureae, Melampsora allii-salicis-albae, Melampsora sp. aff. allii-fragilis, Melampsora larici-pentandrae, Melampsora larici-caprearum, and Melampsora larici-epitea. The first four species were found exclusively on the expected hosts. Melampsora larici-caprearum had a wider host range comprising S. caprea and S. viminalis hybrids. Melampsora larici-epitea can be further differentiated into two formae speciales. The forma specialis larici-epitea typica (59 samples) colonized Salix viminalis clones, Salix purpurea, Salix×dasyclados, and Salix×aquatica. In contrast to this relatively broad host range, f. sp. larici-daphnoides (65 samples) was found exclusively on Salix daphnoides. With the distinction and identification of the rust species/formae speciales it is now possible to test for race-specific resistances in a more targeted manner within the determined pairings of rust and willow species. </AbstractText><CopyrightInformation>Copyright © 2014 The British Mycological Society. Published by Elsevier Ltd. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Bubner</LastName><ForeName>Ben</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>Thünen-Institute of Forest Genetics, Eberswalder Chaussee 3 A, 15377 Waldsieversdorf, Germany. Electronic address: ben.bubner@ti.bund.de.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wunder</LastName><ForeName>Sebastian</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Humboldt-Universität zu Berlin, Faculty of Life Sciences, Division Urban Plant Ecophysiology, Lentzeallee 55, 14195 Berlin, Germany. Electronic address: s_wunder88@web.de.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zaspel</LastName><ForeName>Irmtraut</ForeName><Initials>I</Initials><AffiliationInfo><Affiliation>Thünen-Institute of Forest Genetics, Eberswalder Chaussee 3 A, 15377 Waldsieversdorf, Germany. Electronic address: irmtraut.zaspel@ti.bund.de.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zander</LastName><ForeName>Matthias</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Humboldt-Universität zu Berlin, Faculty of Life Sciences, Division Urban Plant Ecophysiology, Lentzeallee 55, 14195 Berlin, Germany. Electronic address: matthias.zander@agrar.hu-berlin.de.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gloger</LastName><ForeName>Jan</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Humboldt-Universität zu Berlin, Faculty of Life Sciences, Division Urban Plant Ecophysiology, Lentzeallee 55, 14195 Berlin, Germany. Electronic address: jan.gloger@agrar.hu-berlin.de.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fehrenz</LastName><ForeName>Steffen</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Northwest German Forest Research Institute, Prof.-Oelkers-Str. 6, 34346 Hann. Münden, Germany. Electronic address: steffen.fehrenz@NW-FVA.de.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ulrichs</LastName><ForeName>Christian</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Humboldt-Universität zu Berlin, Faculty of Life Sciences, Division Urban Plant Ecophysiology, Lentzeallee 55, 14195 Berlin, Germany. 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MajorTopicYN="N">Phylogeography</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032108" MajorTopicYN="N">Salix</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Host range</Keyword><Keyword MajorTopicYN="N">ITS rDNA sequences</Keyword><Keyword MajorTopicYN="N">Phylogeny</Keyword><Keyword MajorTopicYN="N">Salix daphnoides</Keyword><Keyword MajorTopicYN="N">Short rotation coppice (SRC)</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>10</Month><Day>02</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2014</Year><Month>07</Month><Day>08</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2014</Year><Month>08</Month><Day>13</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>12</Month><Day>3</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>12</Month><Day>3</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2015</Year><Month>7</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">25442294</ArticleId><ArticleId IdType="pii">S1878-6146(14)00122-6</ArticleId><ArticleId IdType="doi">10.1016/j.funbio.2014.08.002</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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