Agronomic performance of Populus deltoides trees engineered for biofuel production.
Identifieur interne : 000033 ( PubMed/Corpus ); précédent : 000032; suivant : 000034Agronomic performance of Populus deltoides trees engineered for biofuel production.
Auteurs : David Macaya-Sanz ; Jin-Gui Chen ; Udaya C. Kalluri ; Wellington Muchero ; Timothy J. Tschaplinski ; Lee E. Gunter ; Sandra J. Simon ; Ajaya K. Biswal ; Anthony C. Bryan ; Raja Payyavula ; Meng Xie ; Yongil Yang ; Jin Zhang ; Debra Mohnen ; Gerald A. Tuskan ; Stephen P. DifazioSource :
- Biotechnology for biofuels [ 1754-6834 ] ; 2017.
Abstract
Background
One of the major barriers to the development of lignocellulosic feedstocks is the recalcitrance of plant cell walls to deconstruction and saccharification. Recalcitrance can be reduced by targeting genes involved in cell wall biosynthesis, but this can have unintended consequences that compromise the agronomic performance of the trees under field conditions. Here we report the results of a field trial of fourteen distinct transgenic
Results
Survival and productivity of the trial were excellent in the first year, and there was little evidence for reduced performance of the transgenic lines with modified target gene expression. Surprisingly, the most striking phenotypic effects in this trial were for two empty-vector control lines that had modified bud set and bud flush. This is most likely due to somaclonal variation or insertional mutagenesis. Traits related to yield, crown architecture, herbivory, pathogen response, and frost damage showed few significant differences between target gene transgenics and empty vector controls. However, there were a few interesting exceptions. Lines overexpressing the
Conclusions
This field trial demonstrates that these cell wall modifications, which decreased cell wall recalcitrance under laboratory conditions, did not seriously compromise first-year performance in the field, despite substantial challenges, including an outbreak of a stem boring insect (
DOI: 10.1186/s13068-017-0934-6
PubMed: 29213313
PubMed Central: PMC5707814
Links to Exploration step
pubmed:29213313Le document en format XML
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<author><name sortKey="Kalluri, Udaya C" sort="Kalluri, Udaya C" uniqKey="Kalluri U" first="Udaya C" last="Kalluri">Udaya C. Kalluri</name>
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<author><name sortKey="Tschaplinski, Timothy J" sort="Tschaplinski, Timothy J" uniqKey="Tschaplinski T" first="Timothy J" last="Tschaplinski">Timothy J. Tschaplinski</name>
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<author><name sortKey="Gunter, Lee E" sort="Gunter, Lee E" uniqKey="Gunter L" first="Lee E" last="Gunter">Lee E. Gunter</name>
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<author><name sortKey="Payyavula, Raja" sort="Payyavula, Raja" uniqKey="Payyavula R" first="Raja" last="Payyavula">Raja Payyavula</name>
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<author><name sortKey="Xie, Meng" sort="Xie, Meng" uniqKey="Xie M" first="Meng" last="Xie">Meng Xie</name>
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<author><name sortKey="Yang, Yongil" sort="Yang, Yongil" uniqKey="Yang Y" first="Yongil" last="Yang">Yongil Yang</name>
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<author><name sortKey="Mohnen, Debra" sort="Mohnen, Debra" uniqKey="Mohnen D" first="Debra" last="Mohnen">Debra Mohnen</name>
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<affiliation><nlm:affiliation>Complex Carbohydrate Research Center, University of Georgia, Athens, GA 30602 USA.</nlm:affiliation>
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<author><name sortKey="Tuskan, Gerald A" sort="Tuskan, Gerald A" uniqKey="Tuskan G" first="Gerald A" last="Tuskan">Gerald A. Tuskan</name>
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<author><name sortKey="Difazio, Stephen P" sort="Difazio, Stephen P" uniqKey="Difazio S" first="Stephen P" last="Difazio">Stephen P. Difazio</name>
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<sourceDesc><biblStruct><analytic><title xml:lang="en">Agronomic performance of <i>Populus deltoides</i>
trees engineered for biofuel production.</title>
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<author><name sortKey="Kalluri, Udaya C" sort="Kalluri, Udaya C" uniqKey="Kalluri U" first="Udaya C" last="Kalluri">Udaya C. Kalluri</name>
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<author><name sortKey="Muchero, Wellington" sort="Muchero, Wellington" uniqKey="Muchero W" first="Wellington" last="Muchero">Wellington Muchero</name>
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<author><name sortKey="Tschaplinski, Timothy J" sort="Tschaplinski, Timothy J" uniqKey="Tschaplinski T" first="Timothy J" last="Tschaplinski">Timothy J. Tschaplinski</name>
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<author><name sortKey="Gunter, Lee E" sort="Gunter, Lee E" uniqKey="Gunter L" first="Lee E" last="Gunter">Lee E. Gunter</name>
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<author><name sortKey="Simon, Sandra J" sort="Simon, Sandra J" uniqKey="Simon S" first="Sandra J" last="Simon">Sandra J. Simon</name>
<affiliation><nlm:affiliation>Department of Biology, West Virginia University, Morgantown, WV 26506 USA.</nlm:affiliation>
</affiliation>
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<author><name sortKey="Biswal, Ajaya K" sort="Biswal, Ajaya K" uniqKey="Biswal A" first="Ajaya K" last="Biswal">Ajaya K. Biswal</name>
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<affiliation><nlm:affiliation>Complex Carbohydrate Research Center, University of Georgia, Athens, GA 30602 USA.</nlm:affiliation>
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<author><name sortKey="Bryan, Anthony C" sort="Bryan, Anthony C" uniqKey="Bryan A" first="Anthony C" last="Bryan">Anthony C. Bryan</name>
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<author><name sortKey="Payyavula, Raja" sort="Payyavula, Raja" uniqKey="Payyavula R" first="Raja" last="Payyavula">Raja Payyavula</name>
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</affiliation>
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<author><name sortKey="Xie, Meng" sort="Xie, Meng" uniqKey="Xie M" first="Meng" last="Xie">Meng Xie</name>
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<author><name sortKey="Yang, Yongil" sort="Yang, Yongil" uniqKey="Yang Y" first="Yongil" last="Yang">Yongil Yang</name>
<affiliation><nlm:affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</nlm:affiliation>
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<author><name sortKey="Zhang, Jin" sort="Zhang, Jin" uniqKey="Zhang J" first="Jin" last="Zhang">Jin Zhang</name>
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<author><name sortKey="Mohnen, Debra" sort="Mohnen, Debra" uniqKey="Mohnen D" first="Debra" last="Mohnen">Debra Mohnen</name>
<affiliation><nlm:affiliation>Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602 USA.</nlm:affiliation>
</affiliation>
<affiliation><nlm:affiliation>Complex Carbohydrate Research Center, University of Georgia, Athens, GA 30602 USA.</nlm:affiliation>
</affiliation>
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<series><title level="j">Biotechnology for biofuels</title>
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<front><div type="abstract" xml:lang="en"><p><b>Background</b>
</p>
<p>One of the major barriers to the development of lignocellulosic feedstocks is the recalcitrance of plant cell walls to deconstruction and saccharification. Recalcitrance can be reduced by targeting genes involved in cell wall biosynthesis, but this can have unintended consequences that compromise the agronomic performance of the trees under field conditions. Here we report the results of a field trial of fourteen distinct transgenic </p>
</div>
<div type="abstract" xml:lang="en"><p><b>Results</b>
</p>
<p>Survival and productivity of the trial were excellent in the first year, and there was little evidence for reduced performance of the transgenic lines with modified target gene expression. Surprisingly, the most striking phenotypic effects in this trial were for two empty-vector control lines that had modified bud set and bud flush. This is most likely due to somaclonal variation or insertional mutagenesis. Traits related to yield, crown architecture, herbivory, pathogen response, and frost damage showed few significant differences between target gene transgenics and empty vector controls. However, there were a few interesting exceptions. Lines overexpressing the </p>
</div>
<div type="abstract" xml:lang="en"><p><b>Conclusions</b>
</p>
<p>This field trial demonstrates that these cell wall modifications, which decreased cell wall recalcitrance under laboratory conditions, did not seriously compromise first-year performance in the field, despite substantial challenges, including an outbreak of a stem boring insect (</p>
</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">29213313</PMID>
<DateRevised><Year>2020</Year>
<Month>10</Month>
<Day>01</Day>
</DateRevised>
<Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1754-6834</ISSN>
<JournalIssue CitedMedium="Print"><Volume>10</Volume>
<PubDate><Year>2017</Year>
</PubDate>
</JournalIssue>
<Title>Biotechnology for biofuels</Title>
<ISOAbbreviation>Biotechnol Biofuels</ISOAbbreviation>
</Journal>
<ArticleTitle>Agronomic performance of <i>Populus deltoides</i>
trees engineered for biofuel production.</ArticleTitle>
<Pagination><MedlinePgn>253</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1186/s13068-017-0934-6</ELocationID>
<Abstract><AbstractText Label="Background" NlmCategory="UNASSIGNED">One of the major barriers to the development of lignocellulosic feedstocks is the recalcitrance of plant cell walls to deconstruction and saccharification. Recalcitrance can be reduced by targeting genes involved in cell wall biosynthesis, but this can have unintended consequences that compromise the agronomic performance of the trees under field conditions. Here we report the results of a field trial of fourteen distinct transgenic <i>Populus deltoides</i>
lines that had previously demonstrated reduced recalcitrance without yield penalties under greenhouse conditions.</AbstractText>
<AbstractText Label="Results" NlmCategory="UNASSIGNED">Survival and productivity of the trial were excellent in the first year, and there was little evidence for reduced performance of the transgenic lines with modified target gene expression. Surprisingly, the most striking phenotypic effects in this trial were for two empty-vector control lines that had modified bud set and bud flush. This is most likely due to somaclonal variation or insertional mutagenesis. Traits related to yield, crown architecture, herbivory, pathogen response, and frost damage showed few significant differences between target gene transgenics and empty vector controls. However, there were a few interesting exceptions. Lines overexpressing the <i>DUF231</i>
gene, a putative <i>O</i>
-acetyltransferase, showed early bud flush and marginally increased height growth. Lines overexpressing the <i>DUF266</i>
gene, a putative glycosyltransferase, had significantly decreased stem internode length and slightly higher volume index. Finally, lines overexpressing the <i>PFD2</i>
gene, a putative member of the prefoldin complex, had a slightly reduced volume index.</AbstractText>
<AbstractText Label="Conclusions" NlmCategory="UNASSIGNED">This field trial demonstrates that these cell wall modifications, which decreased cell wall recalcitrance under laboratory conditions, did not seriously compromise first-year performance in the field, despite substantial challenges, including an outbreak of a stem boring insect (<i>Gypsonoma haimbachiana</i>
), attack by a leaf rust pathogen (<i>Melampsora</i>
spp.), and a late frost event. This bodes well for the potential utility of these lines as advanced biofuels feedstocks.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Macaya-Sanz</LastName>
<ForeName>David</ForeName>
<Initials>D</Initials>
<AffiliationInfo><Affiliation>Department of Biology, West Virginia University, Morgantown, WV 26506 USA.</Affiliation>
<Identifier Source="ISNI">0000 0001 2156 6140</Identifier>
<Identifier Source="GRID">grid.268154.c</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Chen</LastName>
<ForeName>Jin-Gui</ForeName>
<Initials>JG</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Kalluri</LastName>
<ForeName>Udaya C</ForeName>
<Initials>UC</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Muchero</LastName>
<ForeName>Wellington</ForeName>
<Initials>W</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Tschaplinski</LastName>
<ForeName>Timothy J</ForeName>
<Initials>TJ</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Gunter</LastName>
<ForeName>Lee E</ForeName>
<Initials>LE</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Simon</LastName>
<ForeName>Sandra J</ForeName>
<Initials>SJ</Initials>
<AffiliationInfo><Affiliation>Department of Biology, West Virginia University, Morgantown, WV 26506 USA.</Affiliation>
<Identifier Source="ISNI">0000 0001 2156 6140</Identifier>
<Identifier Source="GRID">grid.268154.c</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Biswal</LastName>
<ForeName>Ajaya K</ForeName>
<Initials>AK</Initials>
<AffiliationInfo><Affiliation>Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 1936 738X</Identifier>
<Identifier Source="GRID">grid.213876.9</Identifier>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Complex Carbohydrate Research Center, University of Georgia, Athens, GA 30602 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 1936 738X</Identifier>
<Identifier Source="GRID">grid.213876.9</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Bryan</LastName>
<ForeName>Anthony C</ForeName>
<Initials>AC</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Payyavula</LastName>
<ForeName>Raja</ForeName>
<Initials>R</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Xie</LastName>
<ForeName>Meng</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Yang</LastName>
<ForeName>Yongil</ForeName>
<Initials>Y</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zhang</LastName>
<ForeName>Jin</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Mohnen</LastName>
<ForeName>Debra</ForeName>
<Initials>D</Initials>
<AffiliationInfo><Affiliation>Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 1936 738X</Identifier>
<Identifier Source="GRID">grid.213876.9</Identifier>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Complex Carbohydrate Research Center, University of Georgia, Athens, GA 30602 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 1936 738X</Identifier>
<Identifier Source="GRID">grid.213876.9</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Tuskan</LastName>
<ForeName>Gerald A</ForeName>
<Initials>GA</Initials>
<AffiliationInfo><Affiliation>BioEnergy Science Center and Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 USA.</Affiliation>
<Identifier Source="ISNI">0000 0004 0446 2659</Identifier>
<Identifier Source="GRID">grid.135519.a</Identifier>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>DiFazio</LastName>
<ForeName>Stephen P</ForeName>
<Initials>SP</Initials>
<AffiliationInfo><Affiliation>Department of Biology, West Virginia University, Morgantown, WV 26506 USA.</Affiliation>
<Identifier Source="ISNI">0000 0001 2156 6140</Identifier>
<Identifier Source="GRID">grid.268154.c</Identifier>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<GrantList CompleteYN="Y"><Grant><GrantID>U54 GM104942</GrantID>
<Acronym>GM</Acronym>
<Agency>NIGMS NIH HHS</Agency>
<Country>United States</Country>
</Grant>
</GrantList>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2017</Year>
<Month>11</Month>
<Day>30</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>England</Country>
<MedlineTA>Biotechnol Biofuels</MedlineTA>
<NlmUniqueID>101316935</NlmUniqueID>
<ISSNLinking>1754-6834</ISSNLinking>
</MedlineJournalInfo>
<KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Biofuel</Keyword>
<Keyword MajorTopicYN="N">Cell wall</Keyword>
<Keyword MajorTopicYN="N">Field trial</Keyword>
<Keyword MajorTopicYN="N">Frost</Keyword>
<Keyword MajorTopicYN="N">Insects</Keyword>
<Keyword MajorTopicYN="N">Phenology</Keyword>
<Keyword MajorTopicYN="N">Populus</Keyword>
<Keyword MajorTopicYN="N">Transgenic</Keyword>
<Keyword MajorTopicYN="N">Yield</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year>
<Month>06</Month>
<Day>26</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2017</Year>
<Month>10</Month>
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