Genetics of phenotypic plasticity and biomass traits in hybrid willows across contrasting environments and years
Identifieur interne : 000567 ( Pmc/Curation ); précédent : 000566; suivant : 000568Genetics of phenotypic plasticity and biomass traits in hybrid willows across contrasting environments and years
Auteurs : Sofia Berlin [Suède] ; Henrik R. Hallingb Ck [Suède] ; Friderike Beyer [Suède] ; Nils-Erik Nordh [Suède] ; Martin Weih [Suède] ; Ann-Christin Rönnberg-W Stljung [Suède]Source :
- Annals of Botany [ 0305-7364 ] ; 2017.
Abstract
Url:
DOI: 10.1093/aob/mcx029
PubMed: 28449073
PubMed Central: 5737545
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genetics of phenotypic plasticity and biomass traits in hybrid willows across contrasting environments and years</title><author><name sortKey="Berlin, Sofia" sort="Berlin, Sofia" uniqKey="Berlin S" first="Sofia" last="Berlin">Sofia Berlin</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff1">Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Hallingb Ck, Henrik R" sort="Hallingb Ck, Henrik R" uniqKey="Hallingb Ck H" first="Henrik R." last="Hallingb Ck">Henrik R. Hallingb Ck</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff1">Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Beyer, Friderike" sort="Beyer, Friderike" uniqKey="Beyer F" first="Friderike" last="Beyer">Friderike Beyer</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff2">Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Nordh, Nils Erik" sort="Nordh, Nils Erik" uniqKey="Nordh N" first="Nils-Erik" last="Nordh">Nils-Erik Nordh</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff2">Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Weih, Martin" sort="Weih, Martin" uniqKey="Weih M" first="Martin" last="Weih">Martin Weih</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff2">Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Ronnberg W Stljung, Ann Christin" sort="Ronnberg W Stljung, Ann Christin" uniqKey="Ronnberg W Stljung A" first="Ann-Christin" last="Rönnberg-W Stljung">Ann-Christin Rönnberg-W Stljung</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff1">Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">28449073</idno><idno type="pmc">5737545</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737545</idno><idno type="RBID">PMC:5737545</idno><idno type="doi">10.1093/aob/mcx029</idno><date when="2017">2017</date><idno type="wicri:Area/Pmc/Corpus">000567</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000567</idno><idno type="wicri:Area/Pmc/Curation">000567</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000567</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genetics of phenotypic plasticity and biomass traits in hybrid willows across contrasting environments and years</title><author><name sortKey="Berlin, Sofia" sort="Berlin, Sofia" uniqKey="Berlin S" first="Sofia" last="Berlin">Sofia Berlin</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff1">Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Hallingb Ck, Henrik R" sort="Hallingb Ck, Henrik R" uniqKey="Hallingb Ck H" first="Henrik R." last="Hallingb Ck">Henrik R. Hallingb Ck</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff1">Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Beyer, Friderike" sort="Beyer, Friderike" uniqKey="Beyer F" first="Friderike" last="Beyer">Friderike Beyer</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff2">Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Nordh, Nils Erik" sort="Nordh, Nils Erik" uniqKey="Nordh N" first="Nils-Erik" last="Nordh">Nils-Erik Nordh</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff2">Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Weih, Martin" sort="Weih, Martin" uniqKey="Weih M" first="Martin" last="Weih">Martin Weih</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff2">Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala</wicri:regionArea></affiliation></author><author><name sortKey="Ronnberg W Stljung, Ann Christin" sort="Ronnberg W Stljung, Ann Christin" uniqKey="Ronnberg W Stljung A" first="Ann-Christin" last="Rönnberg-W Stljung">Ann-Christin Rönnberg-W Stljung</name><affiliation wicri:level="1"><nlm:aff id="mcx029-aff1">Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala, Sweden</nlm:aff><country xml:lang="fr">Suède</country><wicri:regionArea>Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala</wicri:regionArea></affiliation></author></analytic><series><title level="j">Annals of Botany</title><idno type="ISSN">0305-7364</idno><idno type="eISSN">1095-8290</idno><imprint><date when="2017">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Abstract</title><p><bold>Background and Aims</bold> Phenotypic plasticity can affect the geographical distribution of taxa and greatly impact the productivity of crops across contrasting and variable environments. The main objectives of this study were to identify genotype–phenotype associations in key biomass and phenology traits and the strength of phenotypic plasticity of these traits in a short-rotation coppice willow population across multiple years and contrasting environments to facilitate marker-assisted selection for these traits.</p><p><bold>Methods</bold> A hybrid <italic>Salix viminalis</italic> × (<italic>S. viminalis</italic> × <italic>Salix schwerinii</italic>) population with 463 individuals was clonally propagated and planted in three common garden experiments comprising one climatic contrast between Sweden and Italy and one water availability contrast in Italy. Several key phenotypic traits were measured and phenotypic plasticity was estimated as the trait value difference between experiments. Quantitative trait locus (QTL) mapping analyses were conducted using a dense linkage map and phenotypic effects of <italic>S. schwerinii</italic> haplotypes derived from detected QTL were assessed.</p><p><bold>Key Results</bold> Across the climatic contrast, clone predictor correlations for biomass traits were low and few common biomass QTL were detected. This indicates that the genetic regulation of biomass traits was sensitive to environmental variation. Biomass QTL were, however, frequently shared across years and across the water availability contrast. Phenology QTL were generally shared between all experiments. Substantial phenotypic plasticity was found among the hybrid offspring, that to a large extent had a genetic origin. Individuals carrying influential <italic>S. schwerinii</italic> haplotypes generally performed well in Sweden but less well in Italy in terms of biomass production.</p><p><bold>Conclusions</bold> The results indicate that specific genetic elements of <italic>S. schwerinii</italic> are more suited to Swedish conditions than to those of Italy. Therefore, selection should preferably be conducted separately for such environments in order to maximize biomass production in admixed <italic>S. viminalis</italic> × <italic>S. schwerinii</italic> populations.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Agrawal, Aa" uniqKey="Agrawal A">AA. 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<front><journal-meta><journal-id journal-id-type="nlm-ta">Ann Bot</journal-id><journal-id journal-id-type="iso-abbrev">Ann. Bot</journal-id><journal-id journal-id-type="publisher-id">annbot</journal-id><journal-title-group><journal-title>Annals of Botany</journal-title></journal-title-group><issn pub-type="ppub">0305-7364</issn><issn pub-type="epub">1095-8290</issn><publisher><publisher-name>Oxford University Press</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">28449073</article-id><article-id pub-id-type="pmc">5737545</article-id><article-id pub-id-type="doi">10.1093/aob/mcx029</article-id><article-id pub-id-type="publisher-id">mcx029</article-id><article-categories><subj-group subj-group-type="heading"><subject>Original Articles</subject></subj-group></article-categories><title-group><article-title>Genetics of phenotypic plasticity and biomass traits in hybrid willows across contrasting environments and years</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Berlin</surname><given-names>Sofia</given-names></name><xref ref-type="aff" rid="mcx029-aff1">1</xref><author-comment><title>‡</title><p>These authors contributed equally to this work</p></author-comment><xref ref-type="author-notes" rid="mcx029-FM2"></xref></contrib><contrib contrib-type="author"><name><surname>Hallingbäck</surname><given-names>Henrik R.</given-names></name><xref ref-type="aff" rid="mcx029-aff1">1</xref><author-comment><title>†</title><p>Present address: Swedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, SE-901 83 Umeå, Sweden</p></author-comment><xref ref-type="author-notes" rid="mcx029-FM1"></xref><author-comment><title>‡</title><p>These authors contributed equally to this work</p></author-comment><xref ref-type="author-notes" rid="mcx029-FM2"></xref></contrib><contrib contrib-type="author"><name><surname>Beyer</surname><given-names>Friderike</given-names></name><xref ref-type="aff" rid="mcx029-aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Nordh</surname><given-names>Nils-Erik</given-names></name><xref ref-type="aff" rid="mcx029-aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Weih</surname><given-names>Martin</given-names></name><xref ref-type="aff" rid="mcx029-aff2">2</xref></contrib><contrib contrib-type="author" corresp="yes"><name><surname>Rönnberg-Wästljung</surname><given-names>Ann-Christin</given-names></name><xref ref-type="aff" rid="mcx029-aff1">1</xref><xref ref-type="corresp" rid="mcx029-cor1"></xref><pmc-comment>anki.wastljung@slu.se </pmc-comment>
</contrib></contrib-group><aff id="mcx029-aff1"><label>1</label>Swedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-750 07 Uppsala, Sweden</aff><aff id="mcx029-aff2"><label>2</label>Swedish University of Agricultural Sciences, Department of Crop Production Ecology, Linnean Centre for Plant Biology, P.O. Box 7043, SE-750 07 Uppsala, Sweden</aff><author-notes><fn id="mcx029-FM1"><label>†</label><p>Present address: Swedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, SE-901 83 Umeå, Sweden</p></fn><fn id="mcx029-FM2"><label>‡</label><p>These authors contributed equally to this work</p></fn><corresp id="mcx029-cor1"><label>*</label>For correspondence. E-mail <email>anki.wastljung@slu.se</email></corresp></author-notes><pub-date pub-type="ppub"><month>7</month><year>2017</year></pub-date><pub-date pub-type="epub" iso-8601-date="2017-04-25"><day>25</day><month>4</month><year>2017</year></pub-date><pub-date pub-type="pmc-release"><day>25</day><month>4</month><year>2017</year></pub-date><pmc-comment> PMC Release delay is 0 months and 0 days and was based on the
<volume>120</volume><issue>1</issue><fpage>87</fpage><lpage>100</lpage><history><date date-type="received"><day>7</day><month>12</month><year>2016</year></date><date date-type="rev-request"><day>18</day><month>1</month><year>2017</year></date><date date-type="accepted"><day>22</day><month>2</month><year>2017</year></date></history><permissions><copyright-statement>© The Author 2017. Published by Oxford University Press on behalf of the Annals of Botany Company.</copyright-statement><copyright-year>2017</copyright-year><license xlink:href="http://creativecommons.org/licenses/by/4.0/" license-type="cc-by"><license-p>This is an Open Access article distributed under the terms of the Creative Commons Attribution License (<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/">http://creativecommons.org/licenses/by/4.0/</ext-link>), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p></license></permissions><self-uri xlink:href="mcx029.pdf"></self-uri><abstract><title>Abstract</title><p><bold>Background and Aims</bold> Phenotypic plasticity can affect the geographical distribution of taxa and greatly impact the productivity of crops across contrasting and variable environments. The main objectives of this study were to identify genotype–phenotype associations in key biomass and phenology traits and the strength of phenotypic plasticity of these traits in a short-rotation coppice willow population across multiple years and contrasting environments to facilitate marker-assisted selection for these traits.</p><p><bold>Methods</bold> A hybrid <italic>Salix viminalis</italic> × (<italic>S. viminalis</italic> × <italic>Salix schwerinii</italic>) population with 463 individuals was clonally propagated and planted in three common garden experiments comprising one climatic contrast between Sweden and Italy and one water availability contrast in Italy. Several key phenotypic traits were measured and phenotypic plasticity was estimated as the trait value difference between experiments. Quantitative trait locus (QTL) mapping analyses were conducted using a dense linkage map and phenotypic effects of <italic>S. schwerinii</italic> haplotypes derived from detected QTL were assessed.</p><p><bold>Key Results</bold> Across the climatic contrast, clone predictor correlations for biomass traits were low and few common biomass QTL were detected. This indicates that the genetic regulation of biomass traits was sensitive to environmental variation. Biomass QTL were, however, frequently shared across years and across the water availability contrast. Phenology QTL were generally shared between all experiments. Substantial phenotypic plasticity was found among the hybrid offspring, that to a large extent had a genetic origin. Individuals carrying influential <italic>S. schwerinii</italic> haplotypes generally performed well in Sweden but less well in Italy in terms of biomass production.</p><p><bold>Conclusions</bold> The results indicate that specific genetic elements of <italic>S. schwerinii</italic> are more suited to Swedish conditions than to those of Italy. Therefore, selection should preferably be conducted separately for such environments in order to maximize biomass production in admixed <italic>S. viminalis</italic> × <italic>S. schwerinii</italic> populations.</p></abstract><kwd-group kwd-group-type="author"><kwd>SRC willows</kwd><kwd>biomass</kwd><kwd>phenology</kwd><kwd>phenotypic plasticity</kwd><kwd>QTL mapping</kwd><kwd><italic>Salix schwerinii</italic></kwd><kwd><italic>Salix viminalis</italic></kwd><kwd>marker-assisted selection</kwd></kwd-group><funding-group><award-group award-type="grant"><funding-source><named-content content-type="funder-name">Swedish Energy Agency</named-content><named-content content-type="funder-identifier">10.13039/501100004527</named-content></funding-source><award-id>30599-3</award-id></award-group></funding-group><counts><page-count count="14"></page-count></counts></article-meta></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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