MelampsoraV2, Pmc, Checkpoint, bibRecord, 000210

Fungal evolution: diversity, taxonomy and phylogeny of the Fungi

Identifieur interne : 000210 ( Pmc/Checkpoint ); précédent : 000209; suivant : 000211

Fungal evolution: diversity, taxonomy and phylogeny of the Fungi

Auteurs : Miguel A. Naranjo-Ortiz ; Toni Gabald N

Source :

Biological Reviews of the Cambridge Philosophical Society [ 1464-7931 ] ; 2019.

RBID : PMC:6899921

Abstract

ABSTRACT

The fungal kingdom comprises a hyperdiverse clade of heterotrophic eukaryotes characterized by the presence of a chitinous cell wall, the loss of phagotrophic capabilities and cell organizations that range from completely unicellular monopolar organisms to highly complex syncitial filaments that may form macroscopic structures. Fungi emerged as a ‘Third Kingdom’, embracing organisms that were outside the classical dichotomy of animals versus vegetals. The taxonomy of this group has a turbulent history that is only now starting to be settled with the advent of genomics and phylogenomics. We here review the current status of the phylogeny and taxonomy of fungi, providing an overview of the main defined groups. Based on current knowledge, nine phylum‐level clades can be defined: Opisthosporidia, Chytridiomycota, Neocallimastigomycota, Blastocladiomycota, Zoopagomycota, Mucoromycota, Glomeromycota, Basidiomycota and Ascomycota. For each group, we discuss their main traits and their diversity, focusing on the evolutionary relationships among the main fungal clades. We also explore the diversity and phylogeny of several groups of uncertain affinities and the main phylogenetic and taxonomical controversies and hypotheses in the field.

Url:

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6899921

DOI: 10.1111/brv.12550
PubMed: 31659870
PubMed Central: 6899921

Affiliations:

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Le document en format XML

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<p>The fungal kingdom comprises a hyperdiverse clade of heterotrophic eukaryotes characterized by the presence of a chitinous cell wall, the loss of phagotrophic capabilities and cell organizations that range from completely unicellular monopolar organisms to highly complex syncitial filaments that may form macroscopic structures. Fungi emerged as a ‘Third Kingdom’, embracing organisms that were outside the classical dichotomy of animals <italic>versus</italic>
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<alt-title alt-title-type="right-running-head">Diversity, taxonomy and phylogeny of the Fungi</alt-title>
<alt-title alt-title-type="left-running-head">Miguel A. Naranjo‐Ortiz and Toni Gabaldón</alt-title>
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<given-names>Miguel A.</given-names>
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<xref ref-type="aff" rid="brv12550-aff-0001"><sup>1</sup>
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<contrib id="brv12550-cr-0002" contrib-type="author" corresp="yes"><name><surname>Gabaldón</surname>
<given-names>Toni</given-names>
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<xref ref-type="aff" rid="brv12550-aff-0001"><sup>1</sup>
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<xref ref-type="aff" rid="brv12550-aff-0002"><sup>2</sup>
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<xref ref-type="aff" rid="brv12550-aff-0003"><sup>3</sup>
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<address><email>toni.gabaldon.bcn@gmail.com</email>
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<named-content content-type="organisation-division">Bioinformatics and Genomics Programme, Centre for Genomic Regulation (CRG)</named-content>
<institution>The Barcelona Institute of Science and Technology</institution>
<named-content content-type="street">Dr. Aiguader 88</named-content>
<city>Barcelona</city>
<postal-code>08003</postal-code>
<country country="ES">Spain</country>
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<aff id="brv12550-aff-0002"><label><sup>2</sup>
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<named-content content-type="organisation-division">Health and Experimental Sciences Department</named-content>
<institution>Universitat Pompeu Fabra (UPF)</institution>
<postal-code>08003</postal-code>
<city>Barcelona</city>
<country country="ES">Spain</country>
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<aff id="brv12550-aff-0003"><label><sup>3</sup>
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<named-content content-type="organisation-division">ICREA</named-content>
<institution>Pg. Lluís Companys 23</institution>
<postal-code>08010</postal-code>
<city>Barcelona</city>
<country country="ES">Spain</country>
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<author-notes><corresp id="correspondenceTo"><label>*</label>
Author for correspondence (Tel: +34 933160281; E‐mail: <email>toni.gabaldon.bcn@gmail.com</email>
)</corresp>
<fn id="brv12550-note-0001"><label>†</label>
<p>Present address: Comparative Genomics Group Barcelona Supercomputing Centre (BSC‐CNS), and Institute for Research in Biomedicine (IRB), Barcelona, Spain.</p>
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<pub-date pub-type="epub"><day>29</day>
<month>10</month>
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<pub-date pub-type="ppub"><month>12</month>
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<volume>94</volume>
<issue>6</issue>
<issue-id pub-id-type="doi">10.1111/brv.v94.6</issue-id>
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<history><date date-type="received"><day>01</day>
<month>10</month>
<year>2018</year>
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<date date-type="rev-recd"><day>25</day>
<month>7</month>
<year>2019</year>
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<year>2019</year>
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<permissions><pmc-comment> Biological Reviews © 2019 Cambridge Philosophical Society </pmc-comment>
        <copyright-statement content-type="article-copyright">© 2019 The Authors. Biological Reviews published by John Wiley & Sons Ltd on behalf of Cambridge Philosophical Society.</copyright-statement>
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<abstract><title>ABSTRACT</title>
<p>The fungal kingdom comprises a hyperdiverse clade of heterotrophic eukaryotes characterized by the presence of a chitinous cell wall, the loss of phagotrophic capabilities and cell organizations that range from completely unicellular monopolar organisms to highly complex syncitial filaments that may form macroscopic structures. Fungi emerged as a ‘Third Kingdom’, embracing organisms that were outside the classical dichotomy of animals <italic>versus</italic>
 vegetals. The taxonomy of this group has a turbulent history that is only now starting to be settled with the advent of genomics and phylogenomics. We here review the current status of the phylogeny and taxonomy of fungi, providing an overview of the main defined groups. Based on current knowledge, nine phylum‐level clades can be defined: Opisthosporidia, Chytridiomycota, Neocallimastigomycota, Blastocladiomycota, Zoopagomycota, Mucoromycota, Glomeromycota, Basidiomycota and Ascomycota. For each group, we discuss their main traits and their diversity, focusing on the evolutionary relationships among the main fungal clades. We also explore the diversity and phylogeny of several groups of uncertain affinities and the main phylogenetic and taxonomical controversies and hypotheses in the field.</p>
</abstract>
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</article-meta>
</front>
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<affiliations><list></list>
<tree><noCountry><name sortKey="Gabald N, Toni" sort="Gabald N, Toni" uniqKey="Gabald N T" first="Toni" last="Gabald N">Toni Gabald N</name>
<name sortKey="Naranjo Rtiz, Miguel A" sort="Naranjo Rtiz, Miguel A" uniqKey="Naranjo Rtiz M" first="Miguel A." last="Naranjo-Ortiz">Miguel A. Naranjo-Ortiz</name>
</noCountry>
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{{Explor lien
   |wiki=    Bois
   |area=    MelampsoraV2
   |flux=    Pmc
   |étape=   Checkpoint
   |type=    RBID
   |clé=     PMC:6899921
   |texte=   Fungal evolution: diversity, taxonomy and phylogeny of the Fungi
}}

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	Serveur d'exploration Melampsora (ISTEX)
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Serveur d'exploration Melampsora (ISTEX)

Fungal evolution: diversity, taxonomy and phylogeny of the Fungi

Fungal evolution: diversity, taxonomy and phylogeny of the Fungi

Source :

Abstract

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Le document en format XML

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Pour générer des pages wiki