Transcriptional response of grapevine to infection with the fungal pathogen Lasiodiplodia theobromae.
Identifieur interne : 000175 ( Main/Corpus ); précédent : 000174; suivant : 000176Transcriptional response of grapevine to infection with the fungal pathogen Lasiodiplodia theobromae.
Auteurs : Wei Zhang ; Jiye Yan ; Xinghong Li ; Qikai Xing ; K W Thilini Chethana ; Wensheng ZhaoSource :
- Scientific reports [ 2045-2322 ] ; 2019.
English descriptors
- KwdEn :
- MESH :
- genetics : Vitis.
- microbiology : Plant Diseases, Vitis.
- pathogenicity : Ascomycota.
- Gene Expression Regulation, Plant, Transcription, Genetic.
Abstract
Botryosphaeria dieback on the grapevine is caused by Botryosphaeriaceae fungi, which threatens the yield and quality of grapes. At present, chemical control strategies are often observed to be ineffective in controlling the disease worldwide. Improving our understanding of the molecular mechanisms that confer resistance to pathogens would facilitate the development of more pathogen-tolerant grape varieties. Here, we used RNA sequencing analysis to profile the transcriptome of grapevine green shoots infected with Lasiodiplodia theobromae over a time course of 4, 8 and 12 hours post inoculation. A total of 5181 genes were identified as differentially expressed genes (DEGs), and DEGs were more abundant over time. Further analysis revealed that many of these DEGs are involved in plant-pathogen interactions, hormone signal transduction and phenylpropanoid biosynthesis pathways, suggesting that innate immunity, phytohormone signaling and many phenylpropanoid compounds, which constitute a complex defense network in plants, are involved in the response of grapevine against to L. theobromae infection. This study provides novel insights into the molecular mechanisms of plant-pathogen interactions that will be valuable for the genetic improvement of grapevines.
DOI: 10.1038/s41598-019-41796-9
PubMed: 30926851
PubMed Central: PMC6441073
Links to Exploration step
pubmed:30926851Le document en format XML
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uniqKey="Yan J" first="Jiye" last="Yan">Jiye Yan</name><affiliation><nlm:affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation></author><author><name sortKey="Li, Xinghong" sort="Li, Xinghong" uniqKey="Li X" first="Xinghong" last="Li">Xinghong Li</name><affiliation><nlm:affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, 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Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation></author><author><name sortKey="Zhao, Wensheng" sort="Zhao, Wensheng" uniqKey="Zhao W" first="Wensheng" last="Zhao">Wensheng Zhao</name><affiliation><nlm:affiliation>State Key Laboratory of Agrobiotechnology and MOA Key Lab of Pest Monitoring and Green Management, China Agricultural University, Beijing, 100193, China. mppzhaws@cau.edu.cn.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2019">2019</date><idno type="RBID">pubmed:30926851</idno><idno type="pmid">30926851</idno><idno type="doi">10.1038/s41598-019-41796-9</idno><idno type="pmc">PMC6441073</idno><idno type="wicri:Area/Main/Corpus">000175</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000175</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Transcriptional response of grapevine to infection with the fungal pathogen Lasiodiplodia theobromae.</title><author><name sortKey="Zhang, Wei" sort="Zhang, Wei" uniqKey="Zhang W" first="Wei" last="Zhang">Wei Zhang</name><affiliation><nlm:affiliation>State Key Laboratory of Agrobiotechnology and MOA Key Lab of Pest Monitoring and Green Management, China Agricultural University, Beijing, 100193, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation></author><author><name sortKey="Yan, Jiye" sort="Yan, Jiye" uniqKey="Yan J" first="Jiye" last="Yan">Jiye Yan</name><affiliation><nlm:affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation></author><author><name sortKey="Li, Xinghong" sort="Li, Xinghong" uniqKey="Li X" first="Xinghong" last="Li">Xinghong Li</name><affiliation><nlm:affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation></author><author><name sortKey="Xing, Qikai" sort="Xing, Qikai" uniqKey="Xing Q" first="Qikai" last="Xing">Qikai Xing</name><affiliation><nlm:affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation></author><author><name sortKey="Chethana, K W Thilini" sort="Chethana, K W Thilini" uniqKey="Chethana K" first="K W Thilini" last="Chethana">K W Thilini Chethana</name><affiliation><nlm:affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation><affiliation><nlm:affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</nlm:affiliation></affiliation></author><author><name sortKey="Zhao, Wensheng" sort="Zhao, Wensheng" uniqKey="Zhao W" first="Wensheng" last="Zhao">Wensheng Zhao</name><affiliation><nlm:affiliation>State Key Laboratory of Agrobiotechnology and MOA Key Lab of Pest Monitoring and Green Management, China Agricultural University, Beijing, 100193, China. mppzhaws@cau.edu.cn.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Scientific reports</title><idno type="eISSN">2045-2322</idno><imprint><date when="2019" type="published">2019</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Ascomycota (pathogenicity)</term><term>Gene Expression Regulation, Plant (MeSH)</term><term>Plant Diseases (microbiology)</term><term>Transcription, Genetic (MeSH)</term><term>Vitis (genetics)</term><term>Vitis (microbiology)</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Vitis</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term><term>Vitis</term></keywords><keywords scheme="MESH" qualifier="pathogenicity" xml:lang="en"><term>Ascomycota</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Gene Expression Regulation, Plant</term><term>Transcription, Genetic</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Botryosphaeria dieback on the grapevine is caused by Botryosphaeriaceae fungi, which threatens the yield and quality of grapes. At present, chemical control strategies are often observed to be ineffective in controlling the disease worldwide. Improving our understanding of the molecular mechanisms that confer resistance to pathogens would facilitate the development of more pathogen-tolerant grape varieties. Here, we used RNA sequencing analysis to profile the transcriptome of grapevine green shoots infected with Lasiodiplodia theobromae over a time course of 4, 8 and 12 hours post inoculation. A total of 5181 genes were identified as differentially expressed genes (DEGs), and DEGs were more abundant over time. Further analysis revealed that many of these DEGs are involved in plant-pathogen interactions, hormone signal transduction and phenylpropanoid biosynthesis pathways, suggesting that innate immunity, phytohormone signaling and many phenylpropanoid compounds, which constitute a complex defense network in plants, are involved in the response of grapevine against to L. theobromae infection. This study provides novel insights into the molecular mechanisms of plant-pathogen interactions that will be valuable for the genetic improvement of grapevines.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">30926851</PMID><DateCompleted><Year>2020</Year><Month>10</Month><Day>27</Day></DateCompleted><DateRevised><Year>2020</Year><Month>10</Month><Day>27</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">2045-2322</ISSN><JournalIssue CitedMedium="Internet"><Volume>9</Volume><Issue>1</Issue><PubDate><Year>2019</Year><Month>03</Month><Day>29</Day></PubDate></JournalIssue><Title>Scientific reports</Title><ISOAbbreviation>Sci Rep</ISOAbbreviation></Journal><ArticleTitle>Transcriptional response of grapevine to infection with the fungal pathogen Lasiodiplodia theobromae.</ArticleTitle><Pagination><MedlinePgn>5387</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1038/s41598-019-41796-9</ELocationID><Abstract><AbstractText>Botryosphaeria dieback on the grapevine is caused by Botryosphaeriaceae fungi, which threatens the yield and quality of grapes. At present, chemical control strategies are often observed to be ineffective in controlling the disease worldwide. Improving our understanding of the molecular mechanisms that confer resistance to pathogens would facilitate the development of more pathogen-tolerant grape varieties. Here, we used RNA sequencing analysis to profile the transcriptome of grapevine green shoots infected with Lasiodiplodia theobromae over a time course of 4, 8 and 12 hours post inoculation. A total of 5181 genes were identified as differentially expressed genes (DEGs), and DEGs were more abundant over time. Further analysis revealed that many of these DEGs are involved in plant-pathogen interactions, hormone signal transduction and phenylpropanoid biosynthesis pathways, suggesting that innate immunity, phytohormone signaling and many phenylpropanoid compounds, which constitute a complex defense network in plants, are involved in the response of grapevine against to L. theobromae infection. This study provides novel insights into the molecular mechanisms of plant-pathogen interactions that will be valuable for the genetic improvement of grapevines.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Wei</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Agrobiotechnology and MOA Key Lab of Pest Monitoring and Green Management, China Agricultural University, Beijing, 100193, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yan</LastName><ForeName>Jiye</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Xinghong</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xing</LastName><ForeName>Qikai</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chethana</LastName><ForeName>K W Thilini</ForeName><Initials>KWT</Initials><AffiliationInfo><Affiliation>Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhao</LastName><ForeName>Wensheng</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Agrobiotechnology and MOA Key Lab of Pest Monitoring and Green Management, China Agricultural University, Beijing, 100193, China. mppzhaws@cau.edu.cn.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>03</Month><Day>29</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Sci Rep</MedlineTA><NlmUniqueID>101563288</NlmUniqueID><ISSNLinking>2045-2322</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001203" MajorTopicYN="N">Ascomycota</DescriptorName><QualifierName UI="Q000472" MajorTopicYN="Y">pathogenicity</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014158" MajorTopicYN="Y">Transcription, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D027843" MajorTopicYN="N">Vitis</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000382" 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