Serveur d'exploration sur les chloroplastes dans l'oxydoréduction chez les plantes

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Structural Basis for the Limited Response to Oxidative and Thiol-Conjugating Agents by Triosephosphate Isomerase From the Photosynthetic Bacteria Synechocystis.

Identifieur interne : 000214 ( Main/Exploration ); précédent : 000213; suivant : 000215

Structural Basis for the Limited Response to Oxidative and Thiol-Conjugating Agents by Triosephosphate Isomerase From the Photosynthetic Bacteria Synechocystis.

Auteurs : Eduardo Castro-Torres [Mexique] ; Pedro Jimenez-Sandoval [Mexique] ; Eli Fernández-De Gortari [États-Unis] ; Margarita L Pez-Castillo [Mexique] ; Noe Baruch-Torres [Mexique] ; Marisol L Pez-Hidalgo [Mexique] ; Antolín Peralta-Castro [Mexique] ; Corina Díaz-Quezada [Mexique] ; Rogerio R. Sotelo-Mundo [Mexique] ; Claudia G. Benitez-Cardoza [Mexique] ; L Michel Espinoza-Fonseca [États-Unis] ; Adrian Ochoa-Leyva [Mexique] ; Luis G. Brieba [Mexique]

Source :

RBID : pubmed:30538993

Abstract

In plants, the ancestral cyanobacterial triosephosphate isomerase (TPI) was replaced by a duplicated version of the cytosolic TPI. This isoform acquired a transit peptide for chloroplast localization and functions in the Calvin-Benson cycle. To gain insight into the reasons for this gene replacement in plants, we characterized the TPI from the photosynthetic bacteria Synechocystis (SyTPI). SyTPI presents typical TPI enzyme kinetics profiles and assembles as a homodimer composed of two subunits that arrange in a (β-α)8 fold. We found that oxidizing agents diamide (DA) and H2O2, as well as thiol-conjugating agents such as oxidized glutathione (GSSG) and methyl methanethiosulfonate (MMTS), do not inhibit the catalytic activity of SyTPI at concentrations required to inactivate plastidic and cytosolic TPIs from the plant model Arabidopsis thaliana (AtpdTPI and AtcTPI, respectively). The crystal structure of SyTPI revealed that each monomer contains three cysteines, C47, C127, and C176; however only the thiol group of C176 is solvent exposed. While AtcTPI and AtpdTPI are redox-regulated by chemical modifications of their accessible and reactive cysteines, we found that C176 of SyTPI is not sensitive to redox modification in vitro. Our data let us postulate that SyTPI was replaced by a eukaryotic TPI, because the latter contains redox-sensitive cysteines that may be subject to post-translational modifications required for modulating TPI's enzymatic activity.

DOI: 10.3389/fmolb.2018.00103
PubMed: 30538993
PubMed Central: PMC6277545


Affiliations:


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<name sortKey="L Pez Hidalgo, Marisol" sort="L Pez Hidalgo, Marisol" uniqKey="L Pez Hidalgo M" first="Marisol" last="L Pez-Hidalgo">Marisol L Pez-Hidalgo</name>
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<country xml:lang="fr">Mexique</country>
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<name sortKey="Peralta Castro, Antolin" sort="Peralta Castro, Antolin" uniqKey="Peralta Castro A" first="Antolín" last="Peralta-Castro">Antolín Peralta-Castro</name>
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<name sortKey="Espinoza Fonseca, L Michel" sort="Espinoza Fonseca, L Michel" uniqKey="Espinoza Fonseca L" first="L Michel" last="Espinoza-Fonseca">L Michel Espinoza-Fonseca</name>
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<name sortKey="Ochoa Leyva, Adrian" sort="Ochoa Leyva, Adrian" uniqKey="Ochoa Leyva A" first="Adrian" last="Ochoa-Leyva">Adrian Ochoa-Leyva</name>
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<name sortKey="Brieba, Luis G" sort="Brieba, Luis G" uniqKey="Brieba L" first="Luis G" last="Brieba">Luis G. Brieba</name>
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<title level="j">Frontiers in molecular biosciences</title>
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<div type="abstract" xml:lang="en">In plants, the ancestral cyanobacterial triosephosphate isomerase (TPI) was replaced by a duplicated version of the cytosolic TPI. This isoform acquired a transit peptide for chloroplast localization and functions in the Calvin-Benson cycle. To gain insight into the reasons for this gene replacement in plants, we characterized the TPI from the photosynthetic bacteria
<i>Synechocystis</i>
(SyTPI). SyTPI presents typical TPI enzyme kinetics profiles and assembles as a homodimer composed of two subunits that arrange in a (β-α)
<sub>8</sub>
fold. We found that oxidizing agents diamide (DA) and H
<sub>2</sub>
O
<sub>2</sub>
, as well as thiol-conjugating agents such as oxidized glutathione (GSSG) and methyl methanethiosulfonate (MMTS), do not inhibit the catalytic activity of SyTPI at concentrations required to inactivate plastidic and cytosolic TPIs from the plant model
<i>Arabidopsis thaliana</i>
(AtpdTPI and AtcTPI, respectively). The crystal structure of SyTPI revealed that each monomer contains three cysteines, C47, C127, and C176; however only the thiol group of C176 is solvent exposed. While AtcTPI and AtpdTPI are redox-regulated by chemical modifications of their accessible and reactive cysteines, we found that C176 of SyTPI is not sensitive to redox modification
<i>in vitro</i>
. Our data let us postulate that SyTPI was replaced by a eukaryotic TPI, because the latter contains redox-sensitive cysteines that may be subject to post-translational modifications required for modulating TPI's enzymatic activity.</div>
</front>
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<i>Synechocystis</i>
.</ArticleTitle>
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<ELocationID EIdType="doi" ValidYN="Y">10.3389/fmolb.2018.00103</ELocationID>
<Abstract>
<AbstractText>In plants, the ancestral cyanobacterial triosephosphate isomerase (TPI) was replaced by a duplicated version of the cytosolic TPI. This isoform acquired a transit peptide for chloroplast localization and functions in the Calvin-Benson cycle. To gain insight into the reasons for this gene replacement in plants, we characterized the TPI from the photosynthetic bacteria
<i>Synechocystis</i>
(SyTPI). SyTPI presents typical TPI enzyme kinetics profiles and assembles as a homodimer composed of two subunits that arrange in a (β-α)
<sub>8</sub>
fold. We found that oxidizing agents diamide (DA) and H
<sub>2</sub>
O
<sub>2</sub>
, as well as thiol-conjugating agents such as oxidized glutathione (GSSG) and methyl methanethiosulfonate (MMTS), do not inhibit the catalytic activity of SyTPI at concentrations required to inactivate plastidic and cytosolic TPIs from the plant model
<i>Arabidopsis thaliana</i>
(AtpdTPI and AtcTPI, respectively). The crystal structure of SyTPI revealed that each monomer contains three cysteines, C47, C127, and C176; however only the thiol group of C176 is solvent exposed. While AtcTPI and AtpdTPI are redox-regulated by chemical modifications of their accessible and reactive cysteines, we found that C176 of SyTPI is not sensitive to redox modification
<i>in vitro</i>
. Our data let us postulate that SyTPI was replaced by a eukaryotic TPI, because the latter contains redox-sensitive cysteines that may be subject to post-translational modifications required for modulating TPI's enzymatic activity.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Castro-Torres</LastName>
<ForeName>Eduardo</ForeName>
<Initials>E</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del IPN, Guanajuato, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Jimenez-Sandoval</LastName>
<ForeName>Pedro</ForeName>
<Initials>P</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del IPN, Guanajuato, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Fernández-de Gortari</LastName>
<ForeName>Eli</ForeName>
<Initials>E</Initials>
<AffiliationInfo>
<Affiliation>Division of Cardiovascular Medicine, Department of Internal Medicine, Center for Arrhythmia Research, University of Michigan, Ann Arbor, MI, United States.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>López-Castillo</LastName>
<ForeName>Margarita</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del IPN, Guanajuato, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Baruch-Torres</LastName>
<ForeName>Noe</ForeName>
<Initials>N</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del IPN, Guanajuato, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>López-Hidalgo</LastName>
<ForeName>Marisol</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio de Investigación Bioquímica, Programa Institucional en Biomedicina Molecular ENMyH-IPN, Ciudad de México, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Peralta-Castro</LastName>
<ForeName>Antolín</ForeName>
<Initials>A</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del IPN, Guanajuato, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Díaz-Quezada</LastName>
<ForeName>Corina</ForeName>
<Initials>C</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del IPN, Guanajuato, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Sotelo-Mundo</LastName>
<ForeName>Rogerio R</ForeName>
<Initials>RR</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio de Estructura Biomolecular, Centro de Investigación en Alimentación y Desarrollo, A.C., Hermosillo, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Benitez-Cardoza</LastName>
<ForeName>Claudia G</ForeName>
<Initials>CG</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio de Investigación Bioquímica, Programa Institucional en Biomedicina Molecular ENMyH-IPN, Ciudad de México, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Espinoza-Fonseca</LastName>
<ForeName>L Michel</ForeName>
<Initials>LM</Initials>
<AffiliationInfo>
<Affiliation>Division of Cardiovascular Medicine, Department of Internal Medicine, Center for Arrhythmia Research, University of Michigan, Ann Arbor, MI, United States.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Ochoa-Leyva</LastName>
<ForeName>Adrian</ForeName>
<Initials>A</Initials>
<AffiliationInfo>
<Affiliation>Departamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Brieba</LastName>
<ForeName>Luis G</ForeName>
<Initials>LG</Initials>
<AffiliationInfo>
<Affiliation>Laboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del IPN, Guanajuato, Mexico.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2018</Year>
<Month>11</Month>
<Day>27</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>Switzerland</Country>
<MedlineTA>Front Mol Biosci</MedlineTA>
<NlmUniqueID>101653173</NlmUniqueID>
<ISSNLinking>2296-889X</ISSNLinking>
</MedlineJournalInfo>
<KeywordList Owner="NOTNLM">
<Keyword MajorTopicYN="N">X-ray structure</Keyword>
<Keyword MajorTopicYN="N">oxidative damage</Keyword>
<Keyword MajorTopicYN="N">protein evolution</Keyword>
<Keyword MajorTopicYN="N">thiol-based redox regulation</Keyword>
<Keyword MajorTopicYN="N">triosephosphate isomerase</Keyword>
</KeywordList>
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<name sortKey="Fernandez De Gortari, Eli" sort="Fernandez De Gortari, Eli" uniqKey="Fernandez De Gortari E" first="Eli" last="Fernández-De Gortari">Eli Fernández-De Gortari</name>
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<name sortKey="Espinoza Fonseca, L Michel" sort="Espinoza Fonseca, L Michel" uniqKey="Espinoza Fonseca L" first="L Michel" last="Espinoza-Fonseca">L Michel Espinoza-Fonseca</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/ChloroPlantRedoxV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000214 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000214 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    ChloroPlantRedoxV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:30538993
   |texte=   Structural Basis for the Limited Response to Oxidative and Thiol-Conjugating Agents by Triosephosphate Isomerase From the Photosynthetic Bacteria Synechocystis.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:30538993" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a ChloroPlantRedoxV1 

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This area was generated with Dilib version V0.6.38.
Data generation: Sat Nov 21 12:07:36 2020. Site generation: Sat Nov 21 12:08:05 2020