Chloroplast DNA variation of oaks in France and the influence of forest fragmentation on genetic diversity
Identifieur interne : 000015 ( PascalFrancis/Curation ); précédent : 000014; suivant : 000016Chloroplast DNA variation of oaks in France and the influence of forest fragmentation on genetic diversity
Auteurs : Rémy J. Petit [France] ; Céline Latouche-Halle [France] ; Marie-Hélène Pemonge [France] ; Antoine Kremer [France]Source :
- Forest ecology and management [ 0378-1127 ] ; 2002.
Descripteurs français
- Pascal (Inist)
- Wicri :
- geographic : France.
English descriptors
- KwdEn :
Abstract
Chloroplast DNA variation was studied in a total of 878 French oak populations from four different species. Three main cpDNA lineages were found, which have well-demarcated distributions in the country. The study of the distribution of haplotypes in each species supports the view that the four species were restricted to different refugia during the last ice-age. This is evident despite the fact that extensive cpDNA introgression occurred during and after postglacial recolonisation. Nevertheless, the individual species have different ecological requirements and also differ in their ability to hybridise, resulting in heterogeneous levels of partitioning of cpDNA diversity and incomplete cpDNA introgression. The first analysis of the effect of the landscape structure on genetic diversity in these oak species is presented here. The only discernible effect of landscape structure on cpDNA diversity was found in Quercus robur, and is very weak and rather counterintuitive. The biology and abundance of these oak species may make them particularly resistant to fragmentation; in addition, artificial seed flow may complicate the picture, and will require more direct investigations.
pA |
|
---|
Links toward previous steps (curation, corpus...)
- to stream PascalFrancis, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000120
Links to Exploration step
Pascal:02-0173661Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en" level="a">Chloroplast DNA variation of oaks in France and the influence of forest fragmentation on genetic diversity</title>
<author><name sortKey="Petit, Remy J" sort="Petit, Remy J" uniqKey="Petit R" first="Rémy J." last="Petit">Rémy J. Petit</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
</affiliation>
</author>
<author><name sortKey="Latouche Halle, Celine" sort="Latouche Halle, Celine" uniqKey="Latouche Halle C" first="Céline" last="Latouche-Halle">Céline Latouche-Halle</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
</affiliation>
</author>
<author><name sortKey="Pemonge, Marie Helene" sort="Pemonge, Marie Helene" uniqKey="Pemonge M" first="Marie-Hélène" last="Pemonge">Marie-Hélène Pemonge</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
</affiliation>
</author>
<author><name sortKey="Kremer, Antoine" sort="Kremer, Antoine" uniqKey="Kremer A" first="Antoine" last="Kremer">Antoine Kremer</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">INIST</idno>
<idno type="inist">02-0173661</idno>
<date when="2002">2002</date>
<idno type="stanalyst">PASCAL 02-0173661 INIST</idno>
<idno type="RBID">Pascal:02-0173661</idno>
<idno type="wicri:Area/PascalFrancis/Corpus">000120</idno>
<idno type="wicri:Area/PascalFrancis/Curation">000015</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a">Chloroplast DNA variation of oaks in France and the influence of forest fragmentation on genetic diversity</title>
<author><name sortKey="Petit, Remy J" sort="Petit, Remy J" uniqKey="Petit R" first="Rémy J." last="Petit">Rémy J. Petit</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
</affiliation>
</author>
<author><name sortKey="Latouche Halle, Celine" sort="Latouche Halle, Celine" uniqKey="Latouche Halle C" first="Céline" last="Latouche-Halle">Céline Latouche-Halle</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
</affiliation>
</author>
<author><name sortKey="Pemonge, Marie Helene" sort="Pemonge, Marie Helene" uniqKey="Pemonge M" first="Marie-Hélène" last="Pemonge">Marie-Hélène Pemonge</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
</affiliation>
</author>
<author><name sortKey="Kremer, Antoine" sort="Kremer, Antoine" uniqKey="Kremer A" first="Antoine" last="Kremer">Antoine Kremer</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
</affiliation>
</author>
</analytic>
<series><title level="j" type="main">Forest ecology and management</title>
<title level="j" type="abbreviated">For. ecol. manage.</title>
<idno type="ISSN">0378-1127</idno>
<imprint><date when="2002">2002</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><title level="j" type="main">Forest ecology and management</title>
<title level="j" type="abbreviated">For. ecol. manage.</title>
<idno type="ISSN">0378-1127</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Chloroplast DNA</term>
<term>Colonization</term>
<term>Ecological abundance</term>
<term>Fragmentation</term>
<term>France</term>
<term>Gene flow</term>
<term>Genetic diversity</term>
<term>Genetic variability</term>
<term>Glaciation</term>
<term>Haplotype</term>
<term>Population genetics</term>
<term>Quercus robur</term>
<term>Spatial distribution</term>
<term>Vegetation dynamics</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>DNA chloroplastique</term>
<term>Variabilité génétique</term>
<term>Diversité génétique</term>
<term>Fragmentation</term>
<term>Dynamique végétation</term>
<term>Génétique population</term>
<term>Glaciation</term>
<term>Colonisation</term>
<term>Répartition spatiale</term>
<term>Quercus robur</term>
<term>France</term>
<term>Haplotype</term>
<term>Abondance écologique</term>
<term>Flux génique</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>France</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Chloroplast DNA variation was studied in a total of 878 French oak populations from four different species. Three main cpDNA lineages were found, which have well-demarcated distributions in the country. The study of the distribution of haplotypes in each species supports the view that the four species were restricted to different refugia during the last ice-age. This is evident despite the fact that extensive cpDNA introgression occurred during and after postglacial recolonisation. Nevertheless, the individual species have different ecological requirements and also differ in their ability to hybridise, resulting in heterogeneous levels of partitioning of cpDNA diversity and incomplete cpDNA introgression. The first analysis of the effect of the landscape structure on genetic diversity in these oak species is presented here. The only discernible effect of landscape structure on cpDNA diversity was found in Quercus robur, and is very weak and rather counterintuitive. The biology and abundance of these oak species may make them particularly resistant to fragmentation; in addition, artificial seed flow may complicate the picture, and will require more direct investigations.</div>
</front>
</TEI>
<inist><standard h6="B"><pA><fA01 i1="01" i2="1"><s0>0378-1127</s0>
</fA01>
<fA02 i1="01"><s0>FECMDW</s0>
</fA02>
<fA03 i2="1"><s0>For. ecol. manage.</s0>
</fA03>
<fA05><s2>156</s2>
</fA05>
<fA06><s2>1-3</s2>
</fA06>
<fA08 i1="01" i2="1" l="ENG"><s1>Chloroplast DNA variation of oaks in France and the influence of forest fragmentation on genetic diversity</s1>
</fA08>
<fA09 i1="01" i2="1" l="ENG"><s1>Range wide distribution of chloroplast DNA diversity and pollen deposits in European white oaks: inferences about colonisation routes and management of oak genetic resources</s1>
</fA09>
<fA11 i1="01" i2="1"><s1>PETIT (Rémy J.)</s1>
</fA11>
<fA11 i1="02" i2="1"><s1>LATOUCHE-HALLE (Céline)</s1>
</fA11>
<fA11 i1="03" i2="1"><s1>PEMONGE (Marie-Hélène)</s1>
</fA11>
<fA11 i1="04" i2="1"><s1>KREMER (Antoine)</s1>
</fA11>
<fA12 i1="01" i2="1"><s1>KREMER (Antoine)</s1>
<s9>ed.</s9>
</fA12>
<fA12 i1="02" i2="1"><s1>GOENAGA (Xabier)</s1>
<s9>préf.</s9>
</fA12>
<fA14 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
</fA14>
<fA15 i1="01"><s1>Institut National de la Recherche Agronomique, Station de Recherches Forestières, BP 45</s1>
<s2>33611 Gazinet</s2>
<s3>FRA</s3>
</fA15>
<fA15 i1="02"><s1>Directorate General for Research, European Commission, Rue de la Loi 200</s1>
<s2>1049 Brussels</s2>
<s3>BEL</s3>
<sZ>2 aut.</sZ>
</fA15>
<fA20><s1>115-129</s1>
</fA20>
<fA21><s1>2002</s1>
</fA21>
<fA23 i1="01"><s0>ENG</s0>
</fA23>
<fA43 i1="01"><s1>INIST</s1>
<s2>17223</s2>
<s5>354000102308950070</s5>
</fA43>
<fA44><s0>0000</s0>
<s1>© 2002 INIST-CNRS. All rights reserved.</s1>
</fA44>
<fA45><s0>26 ref.</s0>
</fA45>
<fA47 i1="01" i2="1"><s0>02-0173661</s0>
</fA47>
<fA60><s1>P</s1>
</fA60>
<fA61><s0>A</s0>
</fA61>
<fA64 i1="01" i2="1"><s0>Forest ecology and management</s0>
</fA64>
<fA66 i1="01"><s0>NLD</s0>
</fA66>
<fC01 i1="01" l="ENG"><s0>Chloroplast DNA variation was studied in a total of 878 French oak populations from four different species. Three main cpDNA lineages were found, which have well-demarcated distributions in the country. The study of the distribution of haplotypes in each species supports the view that the four species were restricted to different refugia during the last ice-age. This is evident despite the fact that extensive cpDNA introgression occurred during and after postglacial recolonisation. Nevertheless, the individual species have different ecological requirements and also differ in their ability to hybridise, resulting in heterogeneous levels of partitioning of cpDNA diversity and incomplete cpDNA introgression. The first analysis of the effect of the landscape structure on genetic diversity in these oak species is presented here. The only discernible effect of landscape structure on cpDNA diversity was found in Quercus robur, and is very weak and rather counterintuitive. The biology and abundance of these oak species may make them particularly resistant to fragmentation; in addition, artificial seed flow may complicate the picture, and will require more direct investigations.</s0>
</fC01>
<fC02 i1="01" i2="X"><s0>002A32D01B3</s0>
</fC02>
<fC02 i1="02" i2="X"><s0>002A33C02</s0>
</fC02>
<fC03 i1="01" i2="X" l="FRE"><s0>DNA chloroplastique</s0>
<s5>01</s5>
</fC03>
<fC03 i1="01" i2="X" l="ENG"><s0>Chloroplast DNA</s0>
<s5>01</s5>
</fC03>
<fC03 i1="01" i2="X" l="SPA"><s0>DNA cloroplástico</s0>
<s5>01</s5>
</fC03>
<fC03 i1="02" i2="X" l="FRE"><s0>Variabilité génétique</s0>
<s5>02</s5>
</fC03>
<fC03 i1="02" i2="X" l="ENG"><s0>Genetic variability</s0>
<s5>02</s5>
</fC03>
<fC03 i1="02" i2="X" l="SPA"><s0>Variabilidad genética</s0>
<s5>02</s5>
</fC03>
<fC03 i1="03" i2="X" l="FRE"><s0>Diversité génétique</s0>
<s5>03</s5>
</fC03>
<fC03 i1="03" i2="X" l="ENG"><s0>Genetic diversity</s0>
<s5>03</s5>
</fC03>
<fC03 i1="03" i2="X" l="SPA"><s0>Diversidad genética</s0>
<s5>03</s5>
</fC03>
<fC03 i1="04" i2="X" l="FRE"><s0>Fragmentation</s0>
<s5>04</s5>
</fC03>
<fC03 i1="04" i2="X" l="ENG"><s0>Fragmentation</s0>
<s5>04</s5>
</fC03>
<fC03 i1="04" i2="X" l="SPA"><s0>Fragmentación</s0>
<s5>04</s5>
</fC03>
<fC03 i1="05" i2="X" l="FRE"><s0>Dynamique végétation</s0>
<s5>05</s5>
</fC03>
<fC03 i1="05" i2="X" l="ENG"><s0>Vegetation dynamics</s0>
<s5>05</s5>
</fC03>
<fC03 i1="05" i2="X" l="SPA"><s0>Dinámica vegetación</s0>
<s5>05</s5>
</fC03>
<fC03 i1="06" i2="X" l="FRE"><s0>Génétique population</s0>
<s5>06</s5>
</fC03>
<fC03 i1="06" i2="X" l="ENG"><s0>Population genetics</s0>
<s5>06</s5>
</fC03>
<fC03 i1="06" i2="X" l="SPA"><s0>Genética población</s0>
<s5>06</s5>
</fC03>
<fC03 i1="07" i2="X" l="FRE"><s0>Glaciation</s0>
<s5>07</s5>
</fC03>
<fC03 i1="07" i2="X" l="ENG"><s0>Glaciation</s0>
<s5>07</s5>
</fC03>
<fC03 i1="07" i2="X" l="SPA"><s0>Glaciación</s0>
<s5>07</s5>
</fC03>
<fC03 i1="08" i2="X" l="FRE"><s0>Colonisation</s0>
<s5>08</s5>
</fC03>
<fC03 i1="08" i2="X" l="ENG"><s0>Colonization</s0>
<s5>08</s5>
</fC03>
<fC03 i1="08" i2="X" l="SPA"><s0>Colonización</s0>
<s5>08</s5>
</fC03>
<fC03 i1="09" i2="X" l="FRE"><s0>Répartition spatiale</s0>
<s5>09</s5>
</fC03>
<fC03 i1="09" i2="X" l="ENG"><s0>Spatial distribution</s0>
<s5>09</s5>
</fC03>
<fC03 i1="09" i2="X" l="SPA"><s0>Distribución espacial</s0>
<s5>09</s5>
</fC03>
<fC03 i1="10" i2="X" l="FRE"><s0>Quercus robur</s0>
<s2>NS</s2>
<s5>10</s5>
</fC03>
<fC03 i1="10" i2="X" l="ENG"><s0>Quercus robur</s0>
<s2>NS</s2>
<s5>10</s5>
</fC03>
<fC03 i1="10" i2="X" l="SPA"><s0>Quercus robur</s0>
<s2>NS</s2>
<s5>10</s5>
</fC03>
<fC03 i1="11" i2="X" l="FRE"><s0>France</s0>
<s2>NG</s2>
<s5>20</s5>
</fC03>
<fC03 i1="11" i2="X" l="ENG"><s0>France</s0>
<s2>NG</s2>
<s5>20</s5>
</fC03>
<fC03 i1="11" i2="X" l="SPA"><s0>Francia</s0>
<s2>NG</s2>
<s5>20</s5>
</fC03>
<fC03 i1="12" i2="X" l="FRE"><s0>Haplotype</s0>
<s5>33</s5>
</fC03>
<fC03 i1="12" i2="X" l="ENG"><s0>Haplotype</s0>
<s5>33</s5>
</fC03>
<fC03 i1="12" i2="X" l="SPA"><s0>Haplotipo</s0>
<s5>33</s5>
</fC03>
<fC03 i1="13" i2="X" l="FRE"><s0>Abondance écologique</s0>
<s5>34</s5>
</fC03>
<fC03 i1="13" i2="X" l="ENG"><s0>Ecological abundance</s0>
<s5>34</s5>
</fC03>
<fC03 i1="13" i2="X" l="SPA"><s0>Abundancia ecológica</s0>
<s5>34</s5>
</fC03>
<fC03 i1="14" i2="X" l="FRE"><s0>Flux génique</s0>
<s5>35</s5>
</fC03>
<fC03 i1="14" i2="X" l="ENG"><s0>Gene flow</s0>
<s5>35</s5>
</fC03>
<fC03 i1="14" i2="X" l="SPA"><s0>Flujo génico</s0>
<s5>35</s5>
</fC03>
<fC07 i1="01" i2="X" l="FRE"><s0>Fagaceae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="01" i2="X" l="ENG"><s0>Fagaceae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="01" i2="X" l="SPA"><s0>Fagaceae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="02" i2="X" l="FRE"><s0>Dicotyledones</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="02" i2="X" l="ENG"><s0>Dicotyledones</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="02" i2="X" l="SPA"><s0>Dicotyledones</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="03" i2="X" l="FRE"><s0>Angiospermae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="03" i2="X" l="ENG"><s0>Angiospermae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="03" i2="X" l="SPA"><s0>Angiospermae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="04" i2="X" l="FRE"><s0>Spermatophyta</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="04" i2="X" l="ENG"><s0>Spermatophyta</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="04" i2="X" l="SPA"><s0>Spermatophyta</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="05" i2="X" l="FRE"><s0>Europe</s0>
<s2>NG</s2>
</fC07>
<fC07 i1="05" i2="X" l="ENG"><s0>Europe</s0>
<s2>NG</s2>
</fC07>
<fC07 i1="05" i2="X" l="SPA"><s0>Europa</s0>
<s2>NG</s2>
</fC07>
<fC07 i1="06" i2="X" l="FRE"><s0>Arbre forestier feuillu</s0>
<s5>39</s5>
</fC07>
<fC07 i1="06" i2="X" l="ENG"><s0>Hardwood forest tree</s0>
<s5>39</s5>
</fC07>
<fC07 i1="06" i2="X" l="SPA"><s0>Arbol forestal frondoso</s0>
<s5>39</s5>
</fC07>
<fC07 i1="07" i2="X" l="FRE"><s0>Europe Ouest</s0>
<s2>NG</s2>
<s5>59</s5>
</fC07>
<fC07 i1="07" i2="X" l="ENG"><s0>Western Europe</s0>
<s2>NG</s2>
<s5>59</s5>
</fC07>
<fC07 i1="07" i2="X" l="SPA"><s0>Europa del Oeste</s0>
<s2>NG</s2>
<s5>59</s5>
</fC07>
<fN21><s1>098</s1>
</fN21>
<fN82><s1>PSI</s1>
</fN82>
</pA>
</standard>
</inist>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/CheneBelgiqueV2/Data/PascalFrancis/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000015 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PascalFrancis/Curation/biblio.hfd -nk 000015 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Wicri/Bois |area= CheneBelgiqueV2 |flux= PascalFrancis |étape= Curation |type= RBID |clé= Pascal:02-0173661 |texte= Chloroplast DNA variation of oaks in France and the influence of forest fragmentation on genetic diversity }}
This area was generated with Dilib version V0.6.27. |