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Chloroplast DNA variation of white oaks in Italy

Identifieur interne : 000121 ( PascalFrancis/Checkpoint ); précédent : 000120; suivant : 000122

Chloroplast DNA variation of white oaks in Italy

Auteurs : Silvia Fineschi [Italie] ; Daniela Taurchini [Italie] ; Paolo Grossoni [Italie] ; Remy J. Petit [France] ; Giovanni G. Vendramin [Italie]

Source :

RBID : Pascal:02-0172672

Descripteurs français

English descriptors

Abstract

Polymorphism in non-coding regions of the chloroplast genome was studied in four white oak species (Q. robur L., Q. petraea (Matt.) Liebl., Q. pubescens Willd. s.l., and Q. frainetto Ten.) in Italy (mainland and associated islands, including Corsica). A total of 924 trees (194 populations) was analysed. This data set also includes results previously obtained on 20 Italian and Corsican populations [Genetics 146 (1997) 1475]. Most of the sampled individuals were classified as Q. pubescens (73.5%). Thirty-four populations out of 194 (17.5%) were polymorphic. The level of population sub-division was very high, as expressed by the value of the coefficient GST = 0.870 (hS = 0.100, hT = 0.776). The highest value of total genetic diversity was calculated in Sardinia and in central Italy; the lowest in southern Italy. The highest values of differentiation among populations occurred in Sardinia (GST = 1), and in Corsica (0.927). We found evidence that the Italian oak populations of today mainly originated from Sicilian and Balkan refugia. Their origin and migration routes are more easily seen by considering data separately for the four sampling regions: the north, the centre, the south, and the three main islands. The C (=blue) lineage was common in the southern part of Italy. This may be a trace of a migration from the Balkans via the Adriatic bridge during quaternary cold periods. The northern part of the country had a set of haplotypes similar to the other Alpine regions. Most Sicilian populations are fixed for one of the two haplotypes that probably originated in the island: one spread over the whole Italian peninsula, whereas the other one did not reach the Alps. Results showed that the Appennines may have played a role in the distribution of the haplotypes western and eastern of the mountains chain.


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</fC03>
<fC03 i1="10" i2="X" l="ENG">
<s0>Quercus robur</s0>
<s2>NS</s2>
<s5>10</s5>
</fC03>
<fC03 i1="10" i2="X" l="SPA">
<s0>Quercus robur</s0>
<s2>NS</s2>
<s5>10</s5>
</fC03>
<fC03 i1="11" i2="X" l="FRE">
<s0>Quercus petraea</s0>
<s2>NS</s2>
<s5>11</s5>
</fC03>
<fC03 i1="11" i2="X" l="ENG">
<s0>Quercus petraea</s0>
<s2>NS</s2>
<s5>11</s5>
</fC03>
<fC03 i1="11" i2="X" l="SPA">
<s0>Quercus petraea</s0>
<s2>NS</s2>
<s5>11</s5>
</fC03>
<fC03 i1="12" i2="X" l="FRE">
<s0>Quercus pubescens</s0>
<s2>NS</s2>
<s5>12</s5>
</fC03>
<fC03 i1="12" i2="X" l="ENG">
<s0>Quercus pubescens</s0>
<s2>NS</s2>
<s5>12</s5>
</fC03>
<fC03 i1="12" i2="X" l="SPA">
<s0>Quercus pubescens</s0>
<s2>NS</s2>
<s5>12</s5>
</fC03>
<fC03 i1="13" i2="X" l="FRE">
<s0>Quercus frainetto</s0>
<s2>NS</s2>
<s5>13</s5>
</fC03>
<fC03 i1="13" i2="X" l="ENG">
<s0>Quercus frainetto</s0>
<s2>NS</s2>
<s5>13</s5>
</fC03>
<fC03 i1="13" i2="X" l="SPA">
<s0>Quercus frainetto</s0>
<s2>NS</s2>
<s5>13</s5>
</fC03>
<fC03 i1="14" i2="X" l="FRE">
<s0>Italie</s0>
<s2>NG</s2>
<s5>20</s5>
</fC03>
<fC03 i1="14" i2="X" l="ENG">
<s0>Italy</s0>
<s2>NG</s2>
<s5>20</s5>
</fC03>
<fC03 i1="14" i2="X" l="SPA">
<s0>Italia</s0>
<s2>NG</s2>
<s5>20</s5>
</fC03>
<fC03 i1="15" i2="X" l="FRE">
<s0>Corse</s0>
<s2>NG</s2>
<s5>21</s5>
</fC03>
<fC03 i1="15" i2="X" l="ENG">
<s0>Corsica</s0>
<s2>NG</s2>
<s5>21</s5>
</fC03>
<fC03 i1="15" i2="X" l="SPA">
<s0>Córcega</s0>
<s2>NG</s2>
<s5>21</s5>
</fC03>
<fC03 i1="16" i2="X" l="FRE">
<s0>Sardaigne</s0>
<s2>NG</s2>
<s5>22</s5>
</fC03>
<fC03 i1="16" i2="X" l="ENG">
<s0>Sardinia</s0>
<s2>NG</s2>
<s5>22</s5>
</fC03>
<fC03 i1="16" i2="X" l="SPA">
<s0>Cerdeña</s0>
<s2>NG</s2>
<s5>22</s5>
</fC03>
<fC03 i1="17" i2="X" l="FRE">
<s0>Sicile</s0>
<s2>NG</s2>
<s5>23</s5>
</fC03>
<fC03 i1="17" i2="X" l="ENG">
<s0>Sicily</s0>
<s2>NG</s2>
<s5>23</s5>
</fC03>
<fC03 i1="17" i2="X" l="SPA">
<s0>Sicilia</s0>
<s2>NG</s2>
<s5>23</s5>
</fC03>
<fC03 i1="18" i2="X" l="FRE">
<s0>Dispersion</s0>
<s5>33</s5>
</fC03>
<fC03 i1="18" i2="X" l="ENG">
<s0>Dispersion</s0>
<s5>33</s5>
</fC03>
<fC03 i1="18" i2="X" l="SPA">
<s0>Dispersión</s0>
<s5>33</s5>
</fC03>
<fC03 i1="19" i2="X" l="FRE">
<s0>Haplotype</s0>
<s5>34</s5>
</fC03>
<fC03 i1="19" i2="X" l="ENG">
<s0>Haplotype</s0>
<s5>34</s5>
</fC03>
<fC03 i1="19" i2="X" l="SPA">
<s0>Haplotipo</s0>
<s5>34</s5>
</fC03>
<fC03 i1="20" i2="X" l="FRE">
<s0>Paléobotanique</s0>
<s5>35</s5>
</fC03>
<fC03 i1="20" i2="X" l="ENG">
<s0>Paleobotany</s0>
<s5>35</s5>
</fC03>
<fC03 i1="20" i2="X" l="SPA">
<s0>Paleobotánica</s0>
<s5>35</s5>
</fC03>
<fC03 i1="21" i2="X" l="FRE">
<s0>Péninsule Balkans</s0>
<s2>NG</s2>
<s5>36</s5>
</fC03>
<fC03 i1="21" i2="X" l="ENG">
<s0>Balkan Peninsula</s0>
<s2>NG</s2>
<s5>36</s5>
</fC03>
<fC03 i1="21" i2="X" l="SPA">
<s0>Península Balcanes</s0>
<s2>NG</s2>
<s5>36</s5>
</fC03>
<fC03 i1="22" i2="X" l="FRE">
<s0>Polymorphisme</s0>
<s5>37</s5>
</fC03>
<fC03 i1="22" i2="X" l="ENG">
<s0>Polymorphism</s0>
<s5>37</s5>
</fC03>
<fC03 i1="22" i2="X" l="SPA">
<s0>Polimorfismo</s0>
<s5>37</s5>
</fC03>
<fC07 i1="01" i2="X" l="FRE">
<s0>Fagaceae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="01" i2="X" l="ENG">
<s0>Fagaceae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="01" i2="X" l="SPA">
<s0>Fagaceae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="02" i2="X" l="FRE">
<s0>Dicotyledones</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="02" i2="X" l="ENG">
<s0>Dicotyledones</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="02" i2="X" l="SPA">
<s0>Dicotyledones</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="03" i2="X" l="FRE">
<s0>Angiospermae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="03" i2="X" l="ENG">
<s0>Angiospermae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="03" i2="X" l="SPA">
<s0>Angiospermae</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="04" i2="X" l="FRE">
<s0>Spermatophyta</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="04" i2="X" l="ENG">
<s0>Spermatophyta</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="04" i2="X" l="SPA">
<s0>Spermatophyta</s0>
<s2>NS</s2>
</fC07>
<fC07 i1="05" i2="X" l="FRE">
<s0>Europe</s0>
<s2>NG</s2>
</fC07>
<fC07 i1="05" i2="X" l="ENG">
<s0>Europe</s0>
<s2>NG</s2>
</fC07>
<fC07 i1="05" i2="X" l="SPA">
<s0>Europa</s0>
<s2>NG</s2>
</fC07>
<fC07 i1="06" i2="X" l="FRE">
<s0>France</s0>
<s2>NG</s2>
</fC07>
<fC07 i1="06" i2="X" l="ENG">
<s0>France</s0>
<s2>NG</s2>
</fC07>
<fC07 i1="06" i2="X" l="SPA">
<s0>Francia</s0>
<s2>NG</s2>
</fC07>
<fC07 i1="07" i2="X" l="FRE">
<s0>Arbre forestier feuillu</s0>
<s5>39</s5>
</fC07>
<fC07 i1="07" i2="X" l="ENG">
<s0>Hardwood forest tree</s0>
<s5>39</s5>
</fC07>
<fC07 i1="07" i2="X" l="SPA">
<s0>Arbol forestal frondoso</s0>
<s5>39</s5>
</fC07>
<fC07 i1="08" i2="X" l="FRE">
<s0>Europe Sud</s0>
<s2>NG</s2>
<s5>59</s5>
</fC07>
<fC07 i1="08" i2="X" l="ENG">
<s0>Southern Europe</s0>
<s2>NG</s2>
<s5>59</s5>
</fC07>
<fC07 i1="08" i2="X" l="SPA">
<s0>Europa Sur</s0>
<s2>NG</s2>
<s5>59</s5>
</fC07>
<fC07 i1="09" i2="X" l="FRE">
<s0>Région méditerranéenne</s0>
<s5>60</s5>
</fC07>
<fC07 i1="09" i2="X" l="ENG">
<s0>Mediterranean region</s0>
<s5>60</s5>
</fC07>
<fC07 i1="09" i2="X" l="SPA">
<s0>Región mediterránea</s0>
<s5>60</s5>
</fC07>
<fN21>
<s1>098</s1>
</fN21>
<fN82>
<s1>PSI</s1>
</fN82>
</pA>
</standard>
</inist>
<affiliations>
<list>
<country>
<li>France</li>
<li>Italie</li>
</country>
<region>
<li>Aquitaine</li>
<li>Nouvelle-Aquitaine</li>
</region>
<settlement>
<li>Gazinet</li>
</settlement>
</list>
<tree>
<country name="Italie">
<noRegion>
<name sortKey="Fineschi, Silvia" sort="Fineschi, Silvia" uniqKey="Fineschi S" first="Silvia" last="Fineschi">Silvia Fineschi</name>
</noRegion>
<name sortKey="Grossoni, Paolo" sort="Grossoni, Paolo" uniqKey="Grossoni P" first="Paolo" last="Grossoni">Paolo Grossoni</name>
<name sortKey="Taurchini, Daniela" sort="Taurchini, Daniela" uniqKey="Taurchini D" first="Daniela" last="Taurchini">Daniela Taurchini</name>
<name sortKey="Vendramin, Giovanni G" sort="Vendramin, Giovanni G" uniqKey="Vendramin G" first="Giovanni G." last="Vendramin">Giovanni G. Vendramin</name>
</country>
<country name="France">
<region name="Nouvelle-Aquitaine">
<name sortKey="Petit, Remy J" sort="Petit, Remy J" uniqKey="Petit R" first="Remy J." last="Petit">Remy J. Petit</name>
</region>
</country>
</tree>
</affiliations>
</record>

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