Chloroplast DNA variation in European white oaks phylogeography and patterns of diversity based on data from over 2600 populations
Identifieur interne : 000D37 ( Main/Merge ); précédent : 000D36; suivant : 000D38Chloroplast DNA variation in European white oaks phylogeography and patterns of diversity based on data from over 2600 populations
Auteurs : Rémy J. Petit ; Ulrike M. Csaikl ; Sandor Bordacs ; Kornel Burg ; Els Coart ; Joan Cottrell ; Barbara Van Dam ; John D. Deans ; Sylvie Dumolin-Lapegue ; Silvia Fineschi ; Reiner Finkeldey ; Amanda Gillies ; Izabela Glaz ; Pablo G. Goicoechea ; Jan S. Jensen ; Armin O. König ; Andrew J. Lowe ; S Ren F. Madsen ; Gabor Matyas ; Robert C. Munro ; Maria Olalde ; Marie-Hélène Pemonge ; Flaviu Popescu ; Danko Slade ; Helen Tabbener ; Daniela Taurchini ; Sven G. M. De Vries ; Birgit Ziegenhagen ; Antoine KremerSource :
- Forest ecology and management [ 0378-1127 ] ; 2002.
Descripteurs français
- Pascal (Inist)
- DNA chloroplastique, Variabilité génétique, Comparaison interspécifique, Variation géographique, Diversité génétique, Génétique population, Phylogenèse, Haplotype, Métissage, Quercus alba, Quercus robur, Quercus petraea, Quercus pubescens, Quercus frainetto, Europe, Différenciation, Ecologie, Cycle évolutif, Evolution biologique, Quercus pyrenaica, Quercus canariensis, Quercus macranthera, Quercus faginea.
English descriptors
- KwdEn :
- Admixture, Biological evolution, Chloroplast DNA, Differentiation, Ecology, Europe, Genetic diversity, Genetic variability, Geographical variation, Haplotype, Interspecific comparison, Life history, Phylogeny, Population genetics, Quercus alba, Quercus frainetto, Quercus petraea, Quercus pubescens, Quercus robur.
Abstract
A consortium of 16 laboratories have studied chloroplast DNA (cpDNA) variation in European white oaks. A common strategy for molecular screening, based on restriction analysis of four PCR-amplified cpDNA fragments, was used to allow comparison among the different laboratories. A total of 2613 oak populations (12,214 individual trees from eight species) weresampled from 37 countries, and analysed with the four fragments. They belong to eight related oak species: Quercus robur, Q. petraea, Q. pubescens, Q. frainetto, Q. faginea, Q. pyrenaica, Q. canariensis and Q. macranthera. During this survey, 45 chloroplast variants were detected and are described together with their phylogenetic relationships, but several of these haplotypes were pooled when there were some risks of confusion across laboratories during the survey, and finally 32 remained that were mapped and used in diversity analyses.
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Pascal:02-0402416Le document en format XML
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Petit</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Csaikl, Ulrike M" sort="Csaikl, Ulrike M" uniqKey="Csaikl U" first="Ulrike M." last="Csaikl">Ulrike M. Csaikl</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Bordacs, Sandor" sort="Bordacs, Sandor" uniqKey="Bordacs S" first="Sandor" last="Bordacs">Sandor Bordacs</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Burg, Kornel" sort="Burg, Kornel" uniqKey="Burg K" first="Kornel" last="Burg">Kornel Burg</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Coart, Els" sort="Coart, Els" uniqKey="Coart E" first="Els" last="Coart">Els Coart</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Cottrell, Joan" sort="Cottrell, Joan" uniqKey="Cottrell J" first="Joan" last="Cottrell">Joan Cottrell</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Van Dam, Barbara" sort="Van Dam, Barbara" uniqKey="Van Dam B" first="Barbara" last="Van Dam">Barbara Van Dam</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Deans, John D" sort="Deans, John D" uniqKey="Deans J" first="John D." last="Deans">John D. Deans</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Dumolin Lapegue, Sylvie" sort="Dumolin Lapegue, Sylvie" uniqKey="Dumolin Lapegue S" first="Sylvie" last="Dumolin-Lapegue">Sylvie Dumolin-Lapegue</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Fineschi, Silvia" sort="Fineschi, Silvia" uniqKey="Fineschi S" first="Silvia" last="Fineschi">Silvia Fineschi</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Finkeldey, Reiner" sort="Finkeldey, Reiner" uniqKey="Finkeldey R" first="Reiner" last="Finkeldey">Reiner Finkeldey</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Gillies, Amanda" sort="Gillies, Amanda" uniqKey="Gillies A" first="Amanda" last="Gillies">Amanda Gillies</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Glaz, Izabela" sort="Glaz, Izabela" uniqKey="Glaz I" first="Izabela" last="Glaz">Izabela Glaz</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Goicoechea, Pablo G" sort="Goicoechea, Pablo G" uniqKey="Goicoechea P" first="Pablo G." last="Goicoechea">Pablo G. Goicoechea</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Jensen, Jan S" sort="Jensen, Jan S" uniqKey="Jensen J" first="Jan S." last="Jensen">Jan S. Jensen</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Konig, Armin O" sort="Konig, Armin O" uniqKey="Konig A" first="Armin O." last="König">Armin O. König</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Lowe, Andrew J" sort="Lowe, Andrew J" uniqKey="Lowe A" first="Andrew J." last="Lowe">Andrew J. Lowe</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Madsen, S Ren F" sort="Madsen, S Ren F" uniqKey="Madsen S" first="S Ren F." last="Madsen">S Ren F. Madsen</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Matyas, Gabor" sort="Matyas, Gabor" uniqKey="Matyas G" first="Gabor" last="Matyas">Gabor Matyas</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Munro, Robert C" sort="Munro, Robert C" uniqKey="Munro R" first="Robert C." last="Munro">Robert C. Munro</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Olalde, Maria" sort="Olalde, Maria" uniqKey="Olalde M" first="Maria" last="Olalde">Maria Olalde</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Pemonge, Marie Helene" sort="Pemonge, Marie Helene" uniqKey="Pemonge M" first="Marie-Hélène" last="Pemonge">Marie-Hélène Pemonge</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Popescu, Flaviu" sort="Popescu, Flaviu" uniqKey="Popescu F" first="Flaviu" last="Popescu">Flaviu Popescu</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Slade, Danko" sort="Slade, Danko" uniqKey="Slade D" first="Danko" last="Slade">Danko Slade</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Tabbener, Helen" sort="Tabbener, Helen" uniqKey="Tabbener H" first="Helen" last="Tabbener">Helen Tabbener</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Taurchini, Daniela" sort="Taurchini, Daniela" uniqKey="Taurchini D" first="Daniela" last="Taurchini">Daniela Taurchini</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="De Vries, Sven G M" sort="De Vries, Sven G M" uniqKey="De Vries S" first="Sven G. M." last="De Vries">Sven G. M. De Vries</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Ziegenhagen, Birgit" sort="Ziegenhagen, Birgit" uniqKey="Ziegenhagen B" first="Birgit" last="Ziegenhagen">Birgit Ziegenhagen</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author><author><name sortKey="Kremer, Antoine" sort="Kremer, Antoine" uniqKey="Kremer A" first="Antoine" last="Kremer">Antoine Kremer</name><affiliation><wicri:noCountry>no FA14</wicri:noCountry></affiliation></author></analytic><series><title level="j" type="main">Forest ecology and management</title><title level="j" type="abbreviated">For. ecol. manage.</title><idno type="ISSN">0378-1127</idno><imprint><date when="2002">2002</date></imprint></series></biblStruct></sourceDesc><seriesStmt><title level="j" type="main">Forest ecology and management</title><title level="j" type="abbreviated">For. ecol. manage.</title><idno type="ISSN">0378-1127</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Admixture</term><term>Biological evolution</term><term>Chloroplast DNA</term><term>Differentiation</term><term>Ecology</term><term>Europe</term><term>Genetic diversity</term><term>Genetic variability</term><term>Geographical variation</term><term>Haplotype</term><term>Interspecific comparison</term><term>Life history</term><term>Phylogeny</term><term>Population genetics</term><term>Quercus alba</term><term>Quercus frainetto</term><term>Quercus petraea</term><term>Quercus pubescens</term><term>Quercus robur</term></keywords><keywords scheme="Pascal" xml:lang="fr"><term>DNA chloroplastique</term><term>Variabilité génétique</term><term>Comparaison interspécifique</term><term>Variation géographique</term><term>Diversité génétique</term><term>Génétique population</term><term>Phylogenèse</term><term>Haplotype</term><term>Métissage</term><term>Quercus alba</term><term>Quercus robur</term><term>Quercus petraea</term><term>Quercus pubescens</term><term>Quercus frainetto</term><term>Europe</term><term>Différenciation</term><term>Ecologie</term><term>Cycle évolutif</term><term>Evolution biologique</term><term>Quercus pyrenaica</term><term>Quercus canariensis</term><term>Quercus macranthera</term><term>Quercus faginea</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A consortium of 16 laboratories have studied chloroplast DNA (cpDNA) variation in European white oaks. A common strategy for molecular screening, based on restriction analysis of four PCR-amplified cpDNA fragments, was used to allow comparison among the different laboratories. A total of 2613 oak populations (12,214 individual trees from eight species) weresampled from 37 countries, and analysed with the four fragments. They belong to eight related oak species: Quercus robur, Q. petraea, Q. pubescens, Q. frainetto, Q. faginea, Q. pyrenaica, Q. canariensis and Q. macranthera. During this survey, 45 chloroplast variants were detected and are described together with their phylogenetic relationships, but several of these haplotypes were pooled when there were some risks of confusion across laboratories during the survey, and finally 32 remained that were mapped and used in diversity analyses.</div></front></TEI><affiliations><list></list><tree><noCountry><name sortKey="Bordacs, Sandor" sort="Bordacs, Sandor" uniqKey="Bordacs S" first="Sandor" last="Bordacs">Sandor Bordacs</name><name sortKey="Burg, Kornel" sort="Burg, Kornel" uniqKey="Burg K" first="Kornel" last="Burg">Kornel Burg</name><name sortKey="Coart, Els" sort="Coart, Els" uniqKey="Coart E" first="Els" last="Coart">Els Coart</name><name sortKey="Cottrell, Joan" sort="Cottrell, Joan" uniqKey="Cottrell J" first="Joan" last="Cottrell">Joan Cottrell</name><name sortKey="Csaikl, Ulrike M" sort="Csaikl, Ulrike M" uniqKey="Csaikl U" first="Ulrike M." last="Csaikl">Ulrike M. Csaikl</name><name sortKey="De Vries, Sven G M" sort="De Vries, Sven G M" uniqKey="De Vries S" first="Sven G. M." last="De Vries">Sven G. M. De Vries</name><name sortKey="Deans, John D" sort="Deans, John D" uniqKey="Deans J" first="John D." last="Deans">John D. Deans</name><name sortKey="Dumolin Lapegue, Sylvie" sort="Dumolin Lapegue, Sylvie" uniqKey="Dumolin Lapegue S" first="Sylvie" last="Dumolin-Lapegue">Sylvie Dumolin-Lapegue</name><name sortKey="Fineschi, Silvia" sort="Fineschi, Silvia" uniqKey="Fineschi S" first="Silvia" last="Fineschi">Silvia Fineschi</name><name sortKey="Finkeldey, Reiner" sort="Finkeldey, Reiner" uniqKey="Finkeldey R" first="Reiner" last="Finkeldey">Reiner Finkeldey</name><name sortKey="Gillies, Amanda" sort="Gillies, Amanda" uniqKey="Gillies A" first="Amanda" last="Gillies">Amanda Gillies</name><name sortKey="Glaz, Izabela" sort="Glaz, Izabela" uniqKey="Glaz I" first="Izabela" last="Glaz">Izabela Glaz</name><name sortKey="Goicoechea, Pablo G" sort="Goicoechea, Pablo G" uniqKey="Goicoechea P" first="Pablo G." last="Goicoechea">Pablo G. Goicoechea</name><name sortKey="Jensen, Jan S" sort="Jensen, Jan S" uniqKey="Jensen J" first="Jan S." last="Jensen">Jan S. Jensen</name><name sortKey="Konig, Armin O" sort="Konig, Armin O" uniqKey="Konig A" first="Armin O." last="König">Armin O. König</name><name sortKey="Kremer, Antoine" sort="Kremer, Antoine" uniqKey="Kremer A" first="Antoine" last="Kremer">Antoine Kremer</name><name sortKey="Lowe, Andrew J" sort="Lowe, Andrew J" uniqKey="Lowe A" first="Andrew J." last="Lowe">Andrew J. Lowe</name><name sortKey="Madsen, S Ren F" sort="Madsen, S Ren F" uniqKey="Madsen S" first="S Ren F." last="Madsen">S Ren F. Madsen</name><name sortKey="Matyas, Gabor" sort="Matyas, Gabor" uniqKey="Matyas G" first="Gabor" last="Matyas">Gabor Matyas</name><name sortKey="Munro, Robert C" sort="Munro, Robert C" uniqKey="Munro R" first="Robert C." last="Munro">Robert C. Munro</name><name sortKey="Olalde, Maria" sort="Olalde, Maria" uniqKey="Olalde M" first="Maria" last="Olalde">Maria Olalde</name><name sortKey="Pemonge, Marie Helene" sort="Pemonge, Marie Helene" uniqKey="Pemonge M" first="Marie-Hélène" last="Pemonge">Marie-Hélène Pemonge</name><name sortKey="Petit, Remy J" sort="Petit, Remy J" uniqKey="Petit R" first="Rémy J." last="Petit">Rémy J. Petit</name><name sortKey="Popescu, Flaviu" sort="Popescu, Flaviu" uniqKey="Popescu F" first="Flaviu" last="Popescu">Flaviu Popescu</name><name sortKey="Slade, Danko" sort="Slade, Danko" uniqKey="Slade D" first="Danko" last="Slade">Danko Slade</name><name sortKey="Tabbener, Helen" sort="Tabbener, Helen" uniqKey="Tabbener H" first="Helen" last="Tabbener">Helen Tabbener</name><name sortKey="Taurchini, Daniela" sort="Taurchini, Daniela" uniqKey="Taurchini D" first="Daniela" last="Taurchini">Daniela Taurchini</name><name sortKey="Van Dam, Barbara" sort="Van Dam, Barbara" uniqKey="Van Dam B" first="Barbara" last="Van Dam">Barbara Van Dam</name><name sortKey="Ziegenhagen, Birgit" sort="Ziegenhagen, Birgit" uniqKey="Ziegenhagen B" first="Birgit" last="Ziegenhagen">Birgit Ziegenhagen</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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