Tree girdling responses simulated by a water and carbon transport model.
Identifieur interne : 000027 ( PubMed/Checkpoint ); précédent : 000026; suivant : 000028Tree girdling responses simulated by a water and carbon transport model.
Auteurs : Veerle De Schepper [Belgique] ; Kathy SteppeSource :
- Annals of botany [ 1095-8290 ] ; 2011.
English descriptors
- KwdEn :
- Carbon (metabolism), Cell Respiration, Computer Simulation, Microclimate, Models, Biological, Osmotic Pressure, Phloem (metabolism), Phloem (physiology), Photosynthesis, Plant Bark (metabolism), Plant Bark (physiology), Plant Leaves (metabolism), Plant Leaves (physiology), Plant Stems (growth & development), Plant Stems (metabolism), Plant Stems (physiology), Plant Transpiration, Quercus (growth & development), Quercus (metabolism), Quercus (physiology), Starch (metabolism), Time Factors, Water (metabolism), Xylem (metabolism).
- MESH :
- chemical , metabolism : Carbon, Starch, Water.
- growth & development : Plant Stems, Quercus.
- metabolism : Phloem, Plant Bark, Plant Leaves, Plant Stems, Quercus, Xylem.
- physiology : Phloem, Plant Bark, Plant Leaves, Plant Stems, Quercus.
- Cell Respiration, Computer Simulation, Microclimate, Models, Biological, Osmotic Pressure, Photosynthesis, Plant Transpiration, Time Factors.
Abstract
Girdling, or the removal of a strip of bark around a tree's outer circumference, is often used to study carbon relationships, as it triggers several carbon responses which seem to be interrelated.
DOI: 10.1093/aob/mcr068
PubMed: 21478174
Affiliations:
Links toward previous steps (curation, corpus...)
Links to Exploration step
pubmed:21478174Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Tree girdling responses simulated by a water and carbon transport model.</title><author><name sortKey="De Schepper, Veerle" sort="De Schepper, Veerle" uniqKey="De Schepper V" first="Veerle" last="De Schepper">Veerle De Schepper</name><affiliation wicri:level="4"><nlm:affiliation>Laboratory of Plant Ecology, Department of Applied Ecology and Environmental Biology, Ghent University, Coupure links 653, B-9000 Ghent, Belgium. Veerle.DeSchepper@UGent.be</nlm:affiliation><country xml:lang="fr">Belgique</country><wicri:regionArea>Laboratory of Plant Ecology, Department of Applied Ecology and Environmental Biology, Ghent University, Coupure links 653, B-9000 Ghent</wicri:regionArea><orgName type="university">Université de Gand</orgName><placeName><settlement type="city">Gand</settlement><region>Région flamande</region><region type="district" nuts="2">Province de Flandre-Orientale</region></placeName></affiliation></author><author><name sortKey="Steppe, Kathy" sort="Steppe, Kathy" uniqKey="Steppe K" first="Kathy" last="Steppe">Kathy Steppe</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2011">2011</date><idno type="RBID">pubmed:21478174</idno><idno type="pmid">21478174</idno><idno type="doi">10.1093/aob/mcr068</idno><idno type="wicri:Area/PubMed/Corpus">000029</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000029</idno><idno type="wicri:Area/PubMed/Curation">000029</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000029</idno><idno type="wicri:Area/PubMed/Checkpoint">000029</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000029</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Tree girdling responses simulated by a water and carbon transport model.</title><author><name sortKey="De Schepper, Veerle" sort="De Schepper, Veerle" uniqKey="De Schepper V" first="Veerle" last="De Schepper">Veerle De Schepper</name><affiliation wicri:level="4"><nlm:affiliation>Laboratory of Plant Ecology, Department of Applied Ecology and Environmental Biology, Ghent University, Coupure links 653, B-9000 Ghent, Belgium. Veerle.DeSchepper@UGent.be</nlm:affiliation><country xml:lang="fr">Belgique</country><wicri:regionArea>Laboratory of Plant Ecology, Department of Applied Ecology and Environmental Biology, Ghent University, Coupure links 653, B-9000 Ghent</wicri:regionArea><orgName type="university">Université de Gand</orgName><placeName><settlement type="city">Gand</settlement><region>Région flamande</region><region type="district" nuts="2">Province de Flandre-Orientale</region></placeName></affiliation></author><author><name sortKey="Steppe, Kathy" sort="Steppe, Kathy" uniqKey="Steppe K" first="Kathy" last="Steppe">Kathy Steppe</name></author></analytic><series><title level="j">Annals of botany</title><idno type="eISSN">1095-8290</idno><imprint><date when="2011" type="published">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Carbon (metabolism)</term><term>Cell Respiration</term><term>Computer Simulation</term><term>Microclimate</term><term>Models, Biological</term><term>Osmotic Pressure</term><term>Phloem (metabolism)</term><term>Phloem (physiology)</term><term>Photosynthesis</term><term>Plant Bark (metabolism)</term><term>Plant Bark (physiology)</term><term>Plant Leaves (metabolism)</term><term>Plant Leaves (physiology)</term><term>Plant Stems (growth & development)</term><term>Plant Stems (metabolism)</term><term>Plant Stems (physiology)</term><term>Plant Transpiration</term><term>Quercus (growth & development)</term><term>Quercus (metabolism)</term><term>Quercus (physiology)</term><term>Starch (metabolism)</term><term>Time Factors</term><term>Water (metabolism)</term><term>Xylem (metabolism)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Carbon</term><term>Starch</term><term>Water</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Plant Stems</term><term>Quercus</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Phloem</term><term>Plant Bark</term><term>Plant Leaves</term><term>Plant Stems</term><term>Quercus</term><term>Xylem</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Phloem</term><term>Plant Bark</term><term>Plant Leaves</term><term>Plant Stems</term><term>Quercus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Cell Respiration</term><term>Computer Simulation</term><term>Microclimate</term><term>Models, Biological</term><term>Osmotic Pressure</term><term>Photosynthesis</term><term>Plant Transpiration</term><term>Time Factors</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Girdling, or the removal of a strip of bark around a tree's outer circumference, is often used to study carbon relationships, as it triggers several carbon responses which seem to be interrelated.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">21478174</PMID><DateCreated><Year>2011</Year><Month>10</Month><Day>11</Day></DateCreated><DateCompleted><Year>2012</Year><Month>01</Month><Day>24</Day></DateCompleted><DateRevised><Year>2017</Year><Month>02</Month><Day>20</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1095-8290</ISSN><JournalIssue CitedMedium="Internet"><Volume>108</Volume><Issue>6</Issue><PubDate><Year>2011</Year><Month>Oct</Month></PubDate></JournalIssue><Title>Annals of botany</Title><ISOAbbreviation>Ann. Bot.</ISOAbbreviation></Journal><ArticleTitle>Tree girdling responses simulated by a water and carbon transport model.</ArticleTitle><Pagination><MedlinePgn>1147-54</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1093/aob/mcr068</ELocationID><Abstract><AbstractText Label="BACKGROUND AND AIMS" NlmCategory="OBJECTIVE">Girdling, or the removal of a strip of bark around a tree's outer circumference, is often used to study carbon relationships, as it triggers several carbon responses which seem to be interrelated.</AbstractText><AbstractText Label="METHODS" NlmCategory="METHODS">An existing plant model describing water and carbon transport in a tree was used to evaluate the mechanisms behind the girdling responses. Therefore, the (un)loading functions of the original model were adapted and became a function of the phloem turgor pressure.</AbstractText><AbstractText Label="KEY RESULTS" NlmCategory="RESULTS">The adapted model successfully simulated the measured changes in stem growth induced by girdling. The model indicated that the key driving variables for the girdling responses were changes in turgor pressure due to local changes in sugar concentrations. Information about the local damage to the phloem system was transferred to the other plant parts (crown and roots) by a change in phloem pressure. After girdling, the loading rate was affected and corresponded to the experimentally observed feedback inhibition. In addition, the unloading rate decreased after girdling and even reversed in some instances. The model enabled continuous simulation of changes in starch content, although a slight underestimation was observed compared with measured values.</AbstractText><AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">For the first time a mechanistic plant model enabled simulation of tree girdling responses, which have thus far only been experimentally observed and fragmentally reported in literature. The close agreement between measured and simulated data confirms the underlying mechanisms introduced in the model.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>De Schepper</LastName><ForeName>Veerle</ForeName><Initials>V</Initials><AffiliationInfo><Affiliation>Laboratory of Plant Ecology, Department of Applied Ecology and Environmental Biology, Ghent University, Coupure links 653, B-9000 Ghent, Belgium. Veerle.DeSchepper@UGent.be</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Steppe</LastName><ForeName>Kathy</ForeName><Initials>K</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2011</Year><Month>04</Month><Day>07</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Ann Bot</MedlineTA><NlmUniqueID>0372347</NlmUniqueID><ISSNLinking>0305-7364</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>059QF0KO0R</RegistryNumber><NameOfSubstance UI="D014867">Water</NameOfSubstance></Chemical><Chemical><RegistryNumber>7440-44-0</RegistryNumber><NameOfSubstance UI="D002244">Carbon</NameOfSubstance></Chemical><Chemical><RegistryNumber>9005-25-8</RegistryNumber><NameOfSubstance UI="D013213">Starch</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="Cites"><RefSource>Tree Physiol. 2008 Oct;28(10):1493-504</RefSource><PMID Version="1">18708331</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Exp Bot. 2010 May;61(8):2083-99</RefSource><PMID Version="1">20176887</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Theor Biol. 1965 Mar;8(2):264-75</RefSource><PMID Version="1">5876240</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Tree Physiol. 2002 Apr;22(5):347-53</RefSource><PMID Version="1">11960759</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Plant Cell Environ. 2007 Jan;30(1):128-34</RefSource><PMID Version="1">17177881</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nature. 2001 Jun 14;411(6839):789-92</RefSource><PMID Version="1">11459055</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Exp Bot. 2005 Jan;56(409):135-44</RefSource><PMID Version="1">15569708</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Theor Biol. 2001 Dec 7;213(3):435-46</RefSource><PMID Version="1">11735290</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Tree Physiol. 1999 Apr;19(4_5):235-242</RefSource><PMID Version="1">12651566</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Tree Physiol. 2007 Mar;27(3):345-52</RefSource><PMID Version="1">17241976</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Tree Physiol. 2004 Aug;24(8):911-7</RefSource><PMID Version="1">15172841</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Exp Bot. 2008;59(6):1341-51</RefSource><PMID Version="1">18375933</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Theor Biol. 2002 Feb 7;214(3):481-98</RefSource><PMID Version="1">11846604</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Math Biosci. 2008 Feb;211(2):314-32</RefSource><PMID Version="1">17936856</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Exp Bot. 2003 Aug;54(389):1899-907</RefSource><PMID Version="1">12869522</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Tree Physiol. 2006 Mar;26(3):257-73</RefSource><PMID Version="1">16356899</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Exp Bot. 2007;58(14):3941-7</RefSource><PMID Version="1">18037679</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D002244" MajorTopicYN="N">Carbon</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D019069" MajorTopicYN="N">Cell Respiration</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003198" MajorTopicYN="N">Computer Simulation</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008834" MajorTopicYN="N">Microclimate</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008954" MajorTopicYN="Y">Models, Biological</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009997" MajorTopicYN="N">Osmotic Pressure</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D052585" MajorTopicYN="N">Phloem</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010788" MajorTopicYN="N">Photosynthesis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D024301" MajorTopicYN="N">Plant Bark</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018547" MajorTopicYN="N">Plant Stems</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018526" MajorTopicYN="N">Plant Transpiration</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D029963" MajorTopicYN="N">Quercus</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013213" MajorTopicYN="N">Starch</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013997" MajorTopicYN="N">Time Factors</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014867" MajorTopicYN="N">Water</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D052584" MajorTopicYN="N">Xylem</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading></MeshHeadingList><OtherID Source="NLM">PMC3189833</OtherID></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2011</Year><Month>4</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2011</Year><Month>4</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2012</Year><Month>1</Month><Day>25</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">21478174</ArticleId><ArticleId IdType="pii">mcr068</ArticleId><ArticleId IdType="doi">10.1093/aob/mcr068</ArticleId><ArticleId IdType="pmc">PMC3189833</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Belgique</li></country><region><li>Province de Flandre-Orientale</li><li>Région flamande</li></region><settlement><li>Gand</li></settlement><orgName><li>Université de Gand</li></orgName></list><tree><noCountry><name sortKey="Steppe, Kathy" sort="Steppe, Kathy" uniqKey="Steppe K" first="Kathy" last="Steppe">Kathy Steppe</name></noCountry><country name="Belgique"><region name="Région flamande"><name sortKey="De Schepper, Veerle" sort="De Schepper, Veerle" uniqKey="De Schepper V" first="Veerle" last="De Schepper">Veerle De Schepper</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/CheneBelgiqueV1/Data/PubMed/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000027 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd -nk 000027 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Bois
|area= CheneBelgiqueV1
|flux= PubMed
|étape= Checkpoint
|type= RBID
|clé= pubmed:21478174
|texte= Tree girdling responses simulated by a water and carbon transport model.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/RBID.i -Sk "pubmed:21478174" \
| HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd \
| NlmPubMed2Wicri -a CheneBelgiqueV1
| This area was generated with Dilib version V0.6.27. |  |