Rickettsia gravesii sp. nov.: a novel spotted fever group rickettsia in Western Australian Amblyomma triguttatum triguttatum ticks.
Identifieur interne : 000616 ( PubMed/Curation ); précédent : 000615; suivant : 000617Rickettsia gravesii sp. nov.: a novel spotted fever group rickettsia in Western Australian Amblyomma triguttatum triguttatum ticks.
Auteurs : Mohammad Y. Abdad [Australie] ; Rita Abou Abdallah [France] ; Khalid El Karkouri [France] ; Mamadou Beye [France] ; John Stenos [Australie] ; Helen Owen [Australie] ; Nathan Unsworth [Australie] ; Ian Robertson [Australie] ; Stuart D. Blacksell [Royaume-Uni] ; Thi-Tien Nguyen [France] ; Claude Nappez [France] ; Didier Raoult [France] ; Stan Fenwick [Australie] ; Pierre-Edouard Fournier [France]Source :
- International journal of systematic and evolutionary microbiology [ 1466-5034 ] ; 2017.
Descripteurs français
- KwdFr :
- ADN bactérien (génétique), ARN ribosomique 16S (génétique), Analyse de séquence d'ADN, Animaux, Australie occidentale, Composition en bases nucléiques, Gènes bactériens, Ixodidae (microbiologie), Phylogénie, Rickettsia (), Rickettsia (génétique), Rickettsia (isolement et purification), Rickettsioses, Techniques de typage bactérien.
- MESH :
- génétique : ADN bactérien, ARN ribosomique 16S, Rickettsia.
- isolement et purification : Rickettsia.
- microbiologie : Ixodidae.
- Analyse de séquence d'ADN, Animaux, Australie occidentale, Composition en bases nucléiques, Gènes bactériens, Phylogénie, Rickettsia, Rickettsioses, Techniques de typage bactérien.
English descriptors
- KwdEn :
- Animals, Bacterial Typing Techniques, Base Composition, DNA, Bacterial (genetics), Genes, Bacterial, Ixodidae (microbiology), Phylogeny, RNA, Ribosomal, 16S (genetics), Rickettsia (classification), Rickettsia (genetics), Rickettsia (isolation & purification), Rickettsia Infections, Sequence Analysis, DNA, Western Australia.
- MESH :
- chemical , genetics : DNA, Bacterial, RNA, Ribosomal, 16S.
- classification : Rickettsia.
- genetics : Rickettsia.
- isolation & purification : Rickettsia.
- microbiology : Ixodidae.
- Animals, Bacterial Typing Techniques, Base Composition, Genes, Bacterial, Phylogeny, Rickettsia Infections, Sequence Analysis, DNA, Western Australia.
Abstract
A rickettsial organism harboured by Amblyomma triguttatum ticks on Barrow Island, Western Australia, was discovered after reports of possible rickettsiosis among local workers. Subsequent isolation of this rickettsia (strain BWI-1) in cell culture and analysis of its phylogenetic, genotypic and phenotypic relationships with type strains of Rickettsia species with standing in nomenclature suggested that it was sufficiently divergent to warrant its classification as a new species. Multiple gene comparison of strain BWI-1 revealed degrees of sequence similarity with Rickettsia raoultii, its closest relative, of 99.58, 98.89, 97.03, 96.93 and 95.73 % for the 16S rRNA, citrate synthase, ompA, ompB and sca4 genes, respectively. Serotyping in mice also demonstrated that strain BWI-1T was distinct from Rickettsia raoultii. Thus, we propose the naming of a new species, Rickettsia gravesii sp. nov., based on its novel genotypic and phenotypic characteristics. Strain BWI-1T was deposited in the ATCC, CSUR and ARRL collections under reference numbers VR-1664, CSUR R172 and RGBWI-1, respectively.
DOI: 10.1099/ijsem.0.001865
PubMed: 28857025
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pubmed:28857025Le document en format XML
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<sourceDesc><biblStruct><analytic><title xml:lang="en">Rickettsia gravesii sp. nov.: a novel spotted fever group rickettsia in Western Australian Amblyomma triguttatum triguttatum ticks.</title>
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<author><name sortKey="Stenos, John" sort="Stenos, John" uniqKey="Stenos J" first="John" last="Stenos">John Stenos</name>
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<author><name sortKey="Nguyen, Thi Tien" sort="Nguyen, Thi Tien" uniqKey="Nguyen T" first="Thi-Tien" last="Nguyen">Thi-Tien Nguyen</name>
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<series><title level="j">International journal of systematic and evolutionary microbiology</title>
<idno type="eISSN">1466-5034</idno>
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<term>Bacterial Typing Techniques</term>
<term>Base Composition</term>
<term>DNA, Bacterial (genetics)</term>
<term>Genes, Bacterial</term>
<term>Ixodidae (microbiology)</term>
<term>Phylogeny</term>
<term>RNA, Ribosomal, 16S (genetics)</term>
<term>Rickettsia (classification)</term>
<term>Rickettsia (genetics)</term>
<term>Rickettsia (isolation & purification)</term>
<term>Rickettsia Infections</term>
<term>Sequence Analysis, DNA</term>
<term>Western Australia</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (génétique)</term>
<term>ARN ribosomique 16S (génétique)</term>
<term>Analyse de séquence d'ADN</term>
<term>Animaux</term>
<term>Australie occidentale</term>
<term>Composition en bases nucléiques</term>
<term>Gènes bactériens</term>
<term>Ixodidae (microbiologie)</term>
<term>Phylogénie</term>
<term>Rickettsia ()</term>
<term>Rickettsia (génétique)</term>
<term>Rickettsia (isolement et purification)</term>
<term>Rickettsioses</term>
<term>Techniques de typage bactérien</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Bacterial</term>
<term>RNA, Ribosomal, 16S</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Rickettsia</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Rickettsia</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN bactérien</term>
<term>ARN ribosomique 16S</term>
<term>Rickettsia</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Rickettsia</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Rickettsia</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Ixodidae</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Ixodidae</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Bacterial Typing Techniques</term>
<term>Base Composition</term>
<term>Genes, Bacterial</term>
<term>Phylogeny</term>
<term>Rickettsia Infections</term>
<term>Sequence Analysis, DNA</term>
<term>Western Australia</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term>
<term>Animaux</term>
<term>Australie occidentale</term>
<term>Composition en bases nucléiques</term>
<term>Gènes bactériens</term>
<term>Phylogénie</term>
<term>Rickettsia</term>
<term>Rickettsioses</term>
<term>Techniques de typage bactérien</term>
</keywords>
</textClass>
</profileDesc>
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<front><div type="abstract" xml:lang="en">A rickettsial organism harboured by Amblyomma triguttatum ticks on Barrow Island, Western Australia, was discovered after reports of possible rickettsiosis among local workers. Subsequent isolation of this rickettsia (strain BWI-1) in cell culture and analysis of its phylogenetic, genotypic and phenotypic relationships with type strains of Rickettsia species with standing in nomenclature suggested that it was sufficiently divergent to warrant its classification as a new species. Multiple gene comparison of strain BWI-1 revealed degrees of sequence similarity with Rickettsia raoultii, its closest relative, of 99.58, 98.89, 97.03, 96.93 and 95.73 % for the 16S rRNA, citrate synthase, ompA, ompB and sca4 genes, respectively. Serotyping in mice also demonstrated that strain BWI-1T was distinct from Rickettsia raoultii. Thus, we propose the naming of a new species, Rickettsia gravesii sp. nov., based on its novel genotypic and phenotypic characteristics. Strain BWI-1T was deposited in the ATCC, CSUR and ARRL collections under reference numbers VR-1664, CSUR R172 and RGBWI-1, respectively.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">28857025</PMID>
<DateCreated><Year>2017</Year>
<Month>08</Month>
<Day>31</Day>
</DateCreated>
<DateCompleted><Year>2017</Year>
<Month>09</Month>
<Day>20</Day>
</DateCompleted>
<DateRevised><Year>2017</Year>
<Month>09</Month>
<Day>20</Day>
</DateRevised>
<Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1466-5034</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>67</Volume>
<Issue>9</Issue>
<PubDate><Year>2017</Year>
<Month>Sep</Month>
</PubDate>
</JournalIssue>
<Title>International journal of systematic and evolutionary microbiology</Title>
<ISOAbbreviation>Int. J. Syst. Evol. Microbiol.</ISOAbbreviation>
</Journal>
<ArticleTitle>Rickettsia gravesii sp. nov.: a novel spotted fever group rickettsia in Western Australian Amblyomma triguttatum triguttatum ticks.</ArticleTitle>
<Pagination><MedlinePgn>3156-3161</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1099/ijsem.0.001865</ELocationID>
<Abstract><AbstractText>A rickettsial organism harboured by Amblyomma triguttatum ticks on Barrow Island, Western Australia, was discovered after reports of possible rickettsiosis among local workers. Subsequent isolation of this rickettsia (strain BWI-1) in cell culture and analysis of its phylogenetic, genotypic and phenotypic relationships with type strains of Rickettsia species with standing in nomenclature suggested that it was sufficiently divergent to warrant its classification as a new species. Multiple gene comparison of strain BWI-1 revealed degrees of sequence similarity with Rickettsia raoultii, its closest relative, of 99.58, 98.89, 97.03, 96.93 and 95.73 % for the 16S rRNA, citrate synthase, ompA, ompB and sca4 genes, respectively. Serotyping in mice also demonstrated that strain BWI-1T was distinct from Rickettsia raoultii. Thus, we propose the naming of a new species, Rickettsia gravesii sp. nov., based on its novel genotypic and phenotypic characteristics. Strain BWI-1T was deposited in the ATCC, CSUR and ARRL collections under reference numbers VR-1664, CSUR R172 and RGBWI-1, respectively.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Abdad</LastName>
<ForeName>Mohammad Y</ForeName>
<Initials>MY</Initials>
<AffiliationInfo><Affiliation>1School of Veterinary and Biomedical Sciences, Murdoch University, South Street, Murdoch 6150, Western Australia, Australia 2Australian Rickettsial Reference Laboratory, Barwon Biomedical Research, Geelong Hospital, Bellerine Street, Geelong 3220, Victoria, Australia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Abdallah</LastName>
<ForeName>Rita Abou</ForeName>
<Initials>RA</Initials>
<AffiliationInfo><Affiliation>3URMITE, Aix Marseille Université, UM63, CNRS 7278, IRD 198, INSERM 1095 IHU - Méditerranée Infection, 19-21 Boulevard Jean Moulin, 13385 Marseille cedex 05, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Karkouri</LastName>
<ForeName>Khalid El</ForeName>
<Initials>KE</Initials>
<AffiliationInfo><Affiliation>3URMITE, Aix Marseille Université, UM63, CNRS 7278, IRD 198, INSERM 1095 IHU - Méditerranée Infection, 19-21 Boulevard Jean Moulin, 13385 Marseille cedex 05, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Beye</LastName>
<ForeName>Mamadou</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>3URMITE, Aix Marseille Université, UM63, CNRS 7278, IRD 198, INSERM 1095 IHU - Méditerranée Infection, 19-21 Boulevard Jean Moulin, 13385 Marseille cedex 05, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Stenos</LastName>
<ForeName>John</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>2Australian Rickettsial Reference Laboratory, Barwon Biomedical Research, Geelong Hospital, Bellerine Street, Geelong 3220, Victoria, Australia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Owen</LastName>
<ForeName>Helen</ForeName>
<Initials>H</Initials>
<AffiliationInfo><Affiliation>1School of Veterinary and Biomedical Sciences, Murdoch University, South Street, Murdoch 6150, Western Australia, Australia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Unsworth</LastName>
<ForeName>Nathan</ForeName>
<Initials>N</Initials>
<AffiliationInfo><Affiliation>2Australian Rickettsial Reference Laboratory, Barwon Biomedical Research, Geelong Hospital, Bellerine Street, Geelong 3220, Victoria, Australia 4Defense Science and Technology Group, Land Division, 506 Lorimer St. Fishermans Bend, Victoria, Australia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Robertson</LastName>
<ForeName>Ian</ForeName>
<Initials>I</Initials>
<AffiliationInfo><Affiliation>1School of Veterinary and Biomedical Sciences, Murdoch University, South Street, Murdoch 6150, Western Australia, Australia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Blacksell</LastName>
<ForeName>Stuart D</ForeName>
<Initials>SD</Initials>
<AffiliationInfo><Affiliation>5Mahidol-Oxford Research Unit (MORU), Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand 6Centre for Tropical Medicine and Global Health, Churchill Hospital, University of Oxford, Oxford, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Nguyen</LastName>
<ForeName>Thi-Tien</ForeName>
<Initials>TT</Initials>
<AffiliationInfo><Affiliation>3URMITE, Aix Marseille Université, UM63, CNRS 7278, IRD 198, INSERM 1095 IHU - Méditerranée Infection, 19-21 Boulevard Jean Moulin, 13385 Marseille cedex 05, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Nappez</LastName>
<ForeName>Claude</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>3URMITE, Aix Marseille Université, UM63, CNRS 7278, IRD 198, INSERM 1095 IHU - Méditerranée Infection, 19-21 Boulevard Jean Moulin, 13385 Marseille cedex 05, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Raoult</LastName>
<ForeName>Didier</ForeName>
<Initials>D</Initials>
<AffiliationInfo><Affiliation>3URMITE, Aix Marseille Université, UM63, CNRS 7278, IRD 198, INSERM 1095 IHU - Méditerranée Infection, 19-21 Boulevard Jean Moulin, 13385 Marseille cedex 05, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Fenwick</LastName>
<ForeName>Stan</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>1School of Veterinary and Biomedical Sciences, Murdoch University, South Street, Murdoch 6150, Western Australia, Australia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Fournier</LastName>
<ForeName>Pierre-Edouard</ForeName>
<Initials>PE</Initials>
<AffiliationInfo><Affiliation>7Centre National de Référence des Rickettsia, Coxiella et Bartonella, Faculté de Médecine, Université de la Méditerranée, 27 Boulevard Jean Moulin, 13385 Marseille cedex 05, France 3URMITE, Aix Marseille Université, UM63, CNRS 7278, IRD 198, INSERM 1095 IHU - Méditerranée Infection, 19-21 Boulevard Jean Moulin, 13385 Marseille cedex 05, France.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2017</Year>
<Month>08</Month>
<Day>31</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>England</Country>
<MedlineTA>Int J Syst Evol Microbiol</MedlineTA>
<NlmUniqueID>100899600</NlmUniqueID>
<ISSNLinking>1466-5026</ISSNLinking>
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<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015373" MajorTopicYN="N">Bacterial Typing Techniques</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D001482" MajorTopicYN="N">Base Composition</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004269" MajorTopicYN="N">DNA, Bacterial</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005798" MajorTopicYN="N">Genes, Bacterial</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D026863" MajorTopicYN="N">Ixodidae</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010802" MajorTopicYN="Y">Phylogeny</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012336" MajorTopicYN="N">RNA, Ribosomal, 16S</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012281" MajorTopicYN="N">Rickettsia</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012282" MajorTopicYN="N">Rickettsia Infections</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014904" MajorTopicYN="N">Western Australia</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2017</Year>
<Month>9</Month>
<Day>1</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2017</Year>
<Month>9</Month>
<Day>21</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<PubMedPubDate PubStatus="entrez"><Year>2017</Year>
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