A prospective study of the prevalence of tuberculosis and bacteraemia in Bangladeshi children with severe malnutrition and pneumonia including an evaluation of Xpert MTB/RIF assay.
Identifieur interne : 003846 ( PubMed/Corpus ); précédent : 003845; suivant : 003847A prospective study of the prevalence of tuberculosis and bacteraemia in Bangladeshi children with severe malnutrition and pneumonia including an evaluation of Xpert MTB/RIF assay.
Auteurs : Mohammod Jobayer Chisti ; Stephen M. Graham ; Trevor Duke ; Tahmeed Ahmed ; Hasan Ashraf ; Abu Syed Golam Faruque ; Sophie La Vincente ; Sayera Banu ; Rubhana Raqib ; Mohammed Abdus SalamSource :
- PloS one [ 1932-6203 ] ; 2014.
English descriptors
- KwdEn :
- Bacteremia (diagnosis), Bacteremia (epidemiology), Bacteremia (microbiology), Bangladesh (epidemiology), Child, Preschool, Comorbidity, Female, Humans, Infant, Male, Malnutrition (epidemiology), Molecular Diagnostic Techniques, Pneumonia (epidemiology), Prevalence, Prospective Studies, Sensitivity and Specificity, Sputum (microbiology), Tuberculosis (diagnosis), Tuberculosis (epidemiology), Tuberculosis (microbiology).
- MESH :
- geographic , epidemiology : Bangladesh.
- diagnosis : Bacteremia, Tuberculosis.
- epidemiology : Bacteremia, Malnutrition, Pneumonia, Tuberculosis.
- microbiology : Bacteremia, Sputum, Tuberculosis.
- Child, Preschool, Comorbidity, Female, Humans, Infant, Male, Molecular Diagnostic Techniques, Prevalence, Prospective Studies, Sensitivity and Specificity.
Abstract
Severe malnutrition is a risk factor for pneumonia due to a wide range of pathogens but aetiological data are limited and the role of Mycobacterium tuberculosis is uncertain.
DOI: 10.1371/journal.pone.0093776
PubMed: 24695758
Links to Exploration step
pubmed:24695758Le document en format XML
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Graham</name><affiliation><nlm:affiliation>Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia; International Union Against Tuberculosis and Lung Disease, Paris, France.</nlm:affiliation></affiliation></author><author><name sortKey="Duke, Trevor" sort="Duke, Trevor" uniqKey="Duke T" first="Trevor" last="Duke">Trevor Duke</name><affiliation><nlm:affiliation>Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Ahmed, Tahmeed" sort="Ahmed, Tahmeed" uniqKey="Ahmed T" first="Tahmeed" last="Ahmed">Tahmeed Ahmed</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="Ashraf, Hasan" sort="Ashraf, Hasan" uniqKey="Ashraf H" first="Hasan" last="Ashraf">Hasan Ashraf</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="Faruque, Abu Syed Golam" sort="Faruque, Abu Syed Golam" uniqKey="Faruque A" first="Abu Syed Golam" last="Faruque">Abu Syed Golam Faruque</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="La Vincente, Sophie" sort="La Vincente, Sophie" uniqKey="La Vincente S" first="Sophie" last="La Vincente">Sophie La Vincente</name><affiliation><nlm:affiliation>Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Banu, Sayera" sort="Banu, Sayera" uniqKey="Banu S" first="Sayera" last="Banu">Sayera Banu</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="Raqib, Rubhana" sort="Raqib, Rubhana" uniqKey="Raqib R" first="Rubhana" last="Raqib">Rubhana Raqib</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="Salam, Mohammed Abdus" sort="Salam, Mohammed Abdus" uniqKey="Salam M" first="Mohammed Abdus" last="Salam">Mohammed Abdus Salam</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2014">2014</date><idno type="RBID">pubmed:24695758</idno><idno type="pmid">24695758</idno><idno type="doi">10.1371/journal.pone.0093776</idno><idno type="wicri:Area/PubMed/Corpus">003846</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">003846</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">A prospective study of the prevalence of tuberculosis and bacteraemia in Bangladeshi children with severe malnutrition and pneumonia including an evaluation of Xpert MTB/RIF assay.</title><author><name sortKey="Chisti, Mohammod Jobayer" sort="Chisti, Mohammod Jobayer" uniqKey="Chisti M" first="Mohammod Jobayer" last="Chisti">Mohammod Jobayer Chisti</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh; Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Graham, Stephen M" sort="Graham, Stephen M" uniqKey="Graham S" first="Stephen M" last="Graham">Stephen M. Graham</name><affiliation><nlm:affiliation>Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia; International Union Against Tuberculosis and Lung Disease, Paris, France.</nlm:affiliation></affiliation></author><author><name sortKey="Duke, Trevor" sort="Duke, Trevor" uniqKey="Duke T" first="Trevor" last="Duke">Trevor Duke</name><affiliation><nlm:affiliation>Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Ahmed, Tahmeed" sort="Ahmed, Tahmeed" uniqKey="Ahmed T" first="Tahmeed" last="Ahmed">Tahmeed Ahmed</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="Ashraf, Hasan" sort="Ashraf, Hasan" uniqKey="Ashraf H" first="Hasan" last="Ashraf">Hasan Ashraf</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="Faruque, Abu Syed Golam" sort="Faruque, Abu Syed Golam" uniqKey="Faruque A" first="Abu Syed Golam" last="Faruque">Abu Syed Golam Faruque</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="La Vincente, Sophie" sort="La Vincente, Sophie" uniqKey="La Vincente S" first="Sophie" last="La Vincente">Sophie La Vincente</name><affiliation><nlm:affiliation>Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Banu, Sayera" sort="Banu, Sayera" uniqKey="Banu S" first="Sayera" last="Banu">Sayera Banu</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="Raqib, Rubhana" sort="Raqib, Rubhana" uniqKey="Raqib R" first="Rubhana" last="Raqib">Rubhana Raqib</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author><author><name sortKey="Salam, Mohammed Abdus" sort="Salam, Mohammed Abdus" uniqKey="Salam M" first="Mohammed Abdus" last="Salam">Mohammed Abdus Salam</name><affiliation><nlm:affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</nlm:affiliation></affiliation></author></analytic><series><title level="j">PloS one</title><idno type="eISSN">1932-6203</idno><imprint><date when="2014" type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bacteremia (diagnosis)</term><term>Bacteremia (epidemiology)</term><term>Bacteremia (microbiology)</term><term>Bangladesh (epidemiology)</term><term>Child, Preschool</term><term>Comorbidity</term><term>Female</term><term>Humans</term><term>Infant</term><term>Male</term><term>Malnutrition (epidemiology)</term><term>Molecular Diagnostic Techniques</term><term>Pneumonia (epidemiology)</term><term>Prevalence</term><term>Prospective Studies</term><term>Sensitivity and Specificity</term><term>Sputum (microbiology)</term><term>Tuberculosis (diagnosis)</term><term>Tuberculosis (epidemiology)</term><term>Tuberculosis (microbiology)</term></keywords><keywords scheme="MESH" type="geographic" qualifier="epidemiology" xml:lang="en"><term>Bangladesh</term></keywords><keywords scheme="MESH" qualifier="diagnosis" xml:lang="en"><term>Bacteremia</term><term>Tuberculosis</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Bacteremia</term><term>Malnutrition</term><term>Pneumonia</term><term>Tuberculosis</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Bacteremia</term><term>Sputum</term><term>Tuberculosis</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Child, Preschool</term><term>Comorbidity</term><term>Female</term><term>Humans</term><term>Infant</term><term>Male</term><term>Molecular Diagnostic Techniques</term><term>Prevalence</term><term>Prospective Studies</term><term>Sensitivity and Specificity</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Severe malnutrition is a risk factor for pneumonia due to a wide range of pathogens but aetiological data are limited and the role of Mycobacterium tuberculosis is uncertain.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24695758</PMID><DateCreated><Year>2014</Year><Month>04</Month><Day>03</Day></DateCreated><DateCompleted><Year>2015</Year><Month>01</Month><Day>29</Day></DateCompleted><DateRevised><Year>2017</Year><Month>02</Month><Day>20</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>9</Volume><Issue>4</Issue><PubDate><Year>2014</Year></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS ONE</ISOAbbreviation></Journal><ArticleTitle>A prospective study of the prevalence of tuberculosis and bacteraemia in Bangladeshi children with severe malnutrition and pneumonia including an evaluation of Xpert MTB/RIF assay.</ArticleTitle><Pagination><MedlinePgn>e93776</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0093776</ELocationID><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Severe malnutrition is a risk factor for pneumonia due to a wide range of pathogens but aetiological data are limited and the role of Mycobacterium tuberculosis is uncertain.</AbstractText><AbstractText Label="METHODS" NlmCategory="METHODS">We prospectively investigated severely malnourished young children (<5 years) with radiological pneumonia admitted over a 15-month period. Investigations included blood culture, sputa for microscopy and mycobacterial culture. Xpert MTB/RIF assay was introduced during the study. Study children were followed for 12 weeks following their discharge from the hospital.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">405 eligible children were enrolled, with a median age of 10 months. Bacterial pathogens were isolated from blood culture in 18 (4.4%) children, of which 72% were Gram negatives. Tuberculosis was confirmed microbiologically in 7% (27/396) of children that provided sputum - 10 by culture, 21 by Xpert MTB/RIF assay, and 4 by both tests. The diagnostic yield from induced sputum was 6% compared to 3.5% from gastric aspirate. Sixty (16%) additional children had tuberculosis diagnosed clinically that was not microbiologically confirmed. Most confirmed tuberculosis cases did not have a positive contact history or positive tuberculin test. The sensitivity and specificity of Xpert MTB/RIF assay compared to culture was 67% (95% CI: 24-94) and 92% (95% CI: 87-95) respectively. Overall case-fatality rate was 17% and half of the deaths occurred in home following discharge from the hospital.</AbstractText><AbstractText Label="CONCLUSION AND SIGNIFICANCE" NlmCategory="CONCLUSIONS">TB was common in severely malnourished Bangladeshi children with pneumonia. X-pert MTB/RIF assay provided higher case detection rate compared to sputum microscopy and culture. The high mortality among the study children underscores the need for further research aimed at improved case detection and management for better outcomes.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Chisti</LastName><ForeName>Mohammod Jobayer</ForeName><Initials>MJ</Initials><AffiliationInfo><Affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh; Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Graham</LastName><ForeName>Stephen M</ForeName><Initials>SM</Initials><AffiliationInfo><Affiliation>Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia; International Union Against Tuberculosis and Lung Disease, Paris, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Duke</LastName><ForeName>Trevor</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ahmed</LastName><ForeName>Tahmeed</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ashraf</LastName><ForeName>Hasan</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Faruque</LastName><ForeName>Abu Syed Golam</ForeName><Initials>AS</Initials><AffiliationInfo><Affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>La Vincente</LastName><ForeName>Sophie</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Centre for International Child Health, The University of Melbourne Department of Paediatrics and Murdoch Childrens Research Institute, Royal Children's Hospital, Melbourne, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Banu</LastName><ForeName>Sayera</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Raqib</LastName><ForeName>Rubhana</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Salam</LastName><ForeName>Mohammed Abdus</ForeName><Initials>MA</Initials><AffiliationInfo><Affiliation>International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2014</Year><Month>04</Month><Day>02</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>PLoS One</MedlineTA><NlmUniqueID>101285081</NlmUniqueID><ISSNLinking>1932-6203</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="Cites"><RefSource>Curr Opin Pulm Med. 2013 May;19(3):229-37</RefSource><PMID 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Version="1">23343418</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D016470" MajorTopicYN="N">Bacteremia</DescriptorName><QualifierName UI="Q000175" MajorTopicYN="N">diagnosis</QualifierName><QualifierName UI="Q000453" MajorTopicYN="Y">epidemiology</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D001459" MajorTopicYN="N" Type="Geographic">Bangladesh</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002675" MajorTopicYN="N">Child, Preschool</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D015897" MajorTopicYN="N">Comorbidity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005260" MajorTopicYN="N">Female</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007223" MajorTopicYN="N">Infant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008297" MajorTopicYN="N">Male</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D044342" MajorTopicYN="N">Malnutrition</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="Y">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D025202" MajorTopicYN="N">Molecular Diagnostic Techniques</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D011014" MajorTopicYN="N">Pneumonia</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="Y">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015995" MajorTopicYN="N">Prevalence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D011446" MajorTopicYN="N">Prospective Studies</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012680" MajorTopicYN="N">Sensitivity and Specificity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013183" MajorTopicYN="N">Sputum</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014376" MajorTopicYN="N">Tuberculosis</DescriptorName><QualifierName UI="Q000175" MajorTopicYN="N">diagnosis</QualifierName><QualifierName UI="Q000453" MajorTopicYN="Y">epidemiology</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading></MeshHeadingList><OtherID Source="NLM">PMC3973596</OtherID></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>11</Month><Day>24</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2014</Year><Month>03</Month><Day>10</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>4</Month><Day>4</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate 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