Evolution of the YABBY gene family in seed plants.
Identifieur interne : 002142 ( PubMed/Corpus ); précédent : 002141; suivant : 002143Evolution of the YABBY gene family in seed plants.
Auteurs : Cédric Finet ; Sandra K. Floyd ; Stephanie J. Conway ; Bojian Zhong ; Charles P. Scutt ; John L. BowmanSource :
- Evolution & development [ 1525-142X ]
English descriptors
- KwdEn :
- Biological Evolution, Evolution, Molecular, Gymnosperms (classification), Gymnosperms (genetics), Gymnosperms (metabolism), Phylogeny, Plant Leaves (metabolism), Plant Proteins (genetics), Plant Proteins (metabolism), Plants (classification), Plants (genetics), Plants (metabolism), Transcription Factors (genetics), Transcription Factors (metabolism).
- MESH :
- chemical , genetics : Plant Proteins, Transcription Factors.
- classification : Gymnosperms, Plants.
- genetics : Gymnosperms, Plants.
- metabolism : Gymnosperms, Plant Leaves, Plant Proteins, Plants, Transcription Factors.
- Biological Evolution, Evolution, Molecular, Phylogeny.
Abstract
Members of the YABBY gene family of transcription factors in angiosperms have been shown to be involved in the initiation of outgrowth of the lamina, the maintenance of polarity, and establishment of the leaf margin. Although most of the dorsal-ventral polarity genes in seed plants have homologs in non-spermatophyte lineages, the presence of YABBY genes is restricted to seed plants. To gain insight into the origin and diversification of this gene family, we reconstructed the evolutionary history of YABBY gene lineages in seed plants. Our findings suggest that either one or two YABBY genes were present in the last common ancestor of extant seed plants. We also examined the expression of YABBY genes in the gymnosperms Ephedra distachya (Gnetales), Ginkgo biloba (Ginkgoales), and Pseudotsuga menziesii (Coniferales). Our data indicate that some YABBY genes are expressed in a polar (abaxial) manner in leaves and female cones in gymnosperms. We propose that YABBY genes already acted as polarity genes in the last common ancestor of extant seed plants.
DOI: 10.1111/ede.12173
PubMed: 26763689
Links to Exploration step
pubmed:26763689Le document en format XML
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Conway</name><affiliation><nlm:affiliation>School of Botany, University of Melbourne, Melbourne, Victoria, 3010, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Zhong, Bojian" sort="Zhong, Bojian" uniqKey="Zhong B" first="Bojian" last="Zhong">Bojian Zhong</name><affiliation><nlm:affiliation>College of Life Sciences, Nanjing Normal University, Nanjing, China.</nlm:affiliation></affiliation></author><author><name sortKey="Scutt, Charles P" sort="Scutt, Charles P" uniqKey="Scutt C" first="Charles P" last="Scutt">Charles P. Scutt</name><affiliation><nlm:affiliation>Université de Lyon, Laboratoire de Reproduction et Développement des Plantes, UMR 5667, CNRS, INRA, Université Claude Bernard Lyon I, Ecole Normale Supérieure de Lyon, 46 allée d'Italie 69364 Lyon Cedex 07, France.</nlm:affiliation></affiliation></author><author><name sortKey="Bowman, John L" sort="Bowman, John L" uniqKey="Bowman J" first="John L" last="Bowman">John L. Bowman</name><affiliation><nlm:affiliation>School of Biological Sciences, Monash University, Melbourne, Victoria, 3800, Australia.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="????"><PubDate><MedlineDate>2016 Mar-Apr</MedlineDate></PubDate></date><idno type="RBID">pubmed:26763689</idno><idno type="pmid">26763689</idno><idno type="doi">10.1111/ede.12173</idno><idno type="wicri:Area/PubMed/Corpus">002142</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">002142</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Evolution of the YABBY gene family in seed plants.</title><author><name sortKey="Finet, Cedric" sort="Finet, Cedric" uniqKey="Finet C" first="Cédric" last="Finet">Cédric Finet</name><affiliation><nlm:affiliation>Université de Lyon, Laboratoire de Reproduction et Développement des Plantes, UMR 5667, CNRS, INRA, Université Claude Bernard Lyon I, Ecole Normale Supérieure de Lyon, 46 allée d'Italie 69364 Lyon Cedex 07, France.</nlm:affiliation></affiliation></author><author><name sortKey="Floyd, Sandra K" sort="Floyd, Sandra K" uniqKey="Floyd S" first="Sandra K" last="Floyd">Sandra K. Floyd</name><affiliation><nlm:affiliation>School of Biological Sciences, Monash University, Melbourne, Victoria, 3800, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Conway, Stephanie J" sort="Conway, Stephanie J" uniqKey="Conway S" first="Stephanie J" last="Conway">Stephanie J. Conway</name><affiliation><nlm:affiliation>School of Botany, University of Melbourne, Melbourne, Victoria, 3010, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Zhong, Bojian" sort="Zhong, Bojian" uniqKey="Zhong B" first="Bojian" last="Zhong">Bojian Zhong</name><affiliation><nlm:affiliation>College of Life Sciences, Nanjing Normal University, Nanjing, China.</nlm:affiliation></affiliation></author><author><name sortKey="Scutt, Charles P" sort="Scutt, Charles P" uniqKey="Scutt C" first="Charles P" last="Scutt">Charles P. Scutt</name><affiliation><nlm:affiliation>Université de Lyon, Laboratoire de Reproduction et Développement des Plantes, UMR 5667, CNRS, INRA, Université Claude Bernard Lyon I, Ecole Normale Supérieure de Lyon, 46 allée d'Italie 69364 Lyon Cedex 07, France.</nlm:affiliation></affiliation></author><author><name sortKey="Bowman, John L" sort="Bowman, John L" uniqKey="Bowman J" first="John L" last="Bowman">John L. Bowman</name><affiliation><nlm:affiliation>School of Biological Sciences, Monash University, Melbourne, Victoria, 3800, Australia.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Evolution & development</title><idno type="eISSN">1525-142X</idno></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Biological Evolution</term><term>Evolution, Molecular</term><term>Gymnosperms (classification)</term><term>Gymnosperms (genetics)</term><term>Gymnosperms (metabolism)</term><term>Phylogeny</term><term>Plant Leaves (metabolism)</term><term>Plant Proteins (genetics)</term><term>Plant Proteins (metabolism)</term><term>Plants (classification)</term><term>Plants (genetics)</term><term>Plants (metabolism)</term><term>Transcription Factors (genetics)</term><term>Transcription Factors (metabolism)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Plant Proteins</term><term>Transcription Factors</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Gymnosperms</term><term>Plants</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Gymnosperms</term><term>Plants</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Gymnosperms</term><term>Plant Leaves</term><term>Plant Proteins</term><term>Plants</term><term>Transcription Factors</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Biological Evolution</term><term>Evolution, Molecular</term><term>Phylogeny</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Members of the YABBY gene family of transcription factors in angiosperms have been shown to be involved in the initiation of outgrowth of the lamina, the maintenance of polarity, and establishment of the leaf margin. Although most of the dorsal-ventral polarity genes in seed plants have homologs in non-spermatophyte lineages, the presence of YABBY genes is restricted to seed plants. To gain insight into the origin and diversification of this gene family, we reconstructed the evolutionary history of YABBY gene lineages in seed plants. Our findings suggest that either one or two YABBY genes were present in the last common ancestor of extant seed plants. We also examined the expression of YABBY genes in the gymnosperms Ephedra distachya (Gnetales), Ginkgo biloba (Ginkgoales), and Pseudotsuga menziesii (Coniferales). Our data indicate that some YABBY genes are expressed in a polar (abaxial) manner in leaves and female cones in gymnosperms. We propose that YABBY genes already acted as polarity genes in the last common ancestor of extant seed plants.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26763689</PMID><DateCreated><Year>2016</Year><Month>03</Month><Day>21</Day></DateCreated><DateCompleted><Year>2016</Year><Month>11</Month><Day>10</Day></DateCompleted><DateRevised><Year>2017</Year><Month>11</Month><Day>16</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1525-142X</ISSN><JournalIssue CitedMedium="Internet"><Volume>18</Volume><Issue>2</Issue><PubDate><MedlineDate>2016 Mar-Apr</MedlineDate></PubDate></JournalIssue><Title>Evolution & development</Title><ISOAbbreviation>Evol. Dev.</ISOAbbreviation></Journal><ArticleTitle>Evolution of the YABBY gene family in seed plants.</ArticleTitle><Pagination><MedlinePgn>116-26</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/ede.12173</ELocationID><Abstract><AbstractText>Members of the YABBY gene family of transcription factors in angiosperms have been shown to be involved in the initiation of outgrowth of the lamina, the maintenance of polarity, and establishment of the leaf margin. Although most of the dorsal-ventral polarity genes in seed plants have homologs in non-spermatophyte lineages, the presence of YABBY genes is restricted to seed plants. To gain insight into the origin and diversification of this gene family, we reconstructed the evolutionary history of YABBY gene lineages in seed plants. Our findings suggest that either one or two YABBY genes were present in the last common ancestor of extant seed plants. We also examined the expression of YABBY genes in the gymnosperms Ephedra distachya (Gnetales), Ginkgo biloba (Ginkgoales), and Pseudotsuga menziesii (Coniferales). Our data indicate that some YABBY genes are expressed in a polar (abaxial) manner in leaves and female cones in gymnosperms. We propose that YABBY genes already acted as polarity genes in the last common ancestor of extant seed plants.</AbstractText><CopyrightInformation>© 2016 Wiley Periodicals, Inc.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Finet</LastName><ForeName>Cédric</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Université de Lyon, Laboratoire de Reproduction et Développement des Plantes, UMR 5667, CNRS, INRA, Université Claude Bernard Lyon I, Ecole Normale Supérieure de Lyon, 46 allée d'Italie 69364 Lyon Cedex 07, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Floyd</LastName><ForeName>Sandra K</ForeName><Initials>SK</Initials><AffiliationInfo><Affiliation>School of Biological Sciences, Monash University, Melbourne, Victoria, 3800, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Conway</LastName><ForeName>Stephanie J</ForeName><Initials>SJ</Initials><AffiliationInfo><Affiliation>School of Botany, University of Melbourne, Melbourne, Victoria, 3010, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhong</LastName><ForeName>Bojian</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>College of Life Sciences, Nanjing Normal University, Nanjing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Scutt</LastName><ForeName>Charles P</ForeName><Initials>CP</Initials><AffiliationInfo><Affiliation>Université de Lyon, Laboratoire de Reproduction et Développement des Plantes, UMR 5667, CNRS, INRA, Université Claude Bernard Lyon I, Ecole Normale Supérieure de Lyon, 46 allée d'Italie 69364 Lyon Cedex 07, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bowman</LastName><ForeName>John L</ForeName><Initials>JL</Initials><AffiliationInfo><Affiliation>School of Biological Sciences, Monash University, Melbourne, Victoria, 3800, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Section of Plant Biology, University of California Davis, One Shields Ave., Davis, CA, 95616, USA.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>01</Month><Day>13</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Evol Dev</MedlineTA><NlmUniqueID>100883432</NlmUniqueID><ISSNLinking>1520-541X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014157">Transcription 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