Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species.
Identifieur interne : 000936 ( PubMed/Corpus ); précédent : 000935; suivant : 000937Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species.
Auteurs : S L Pearce ; D F Clarke ; P D East ; S. Elfekih ; K H J. Gordon ; L S Jermiin ; A. Mcgaughran ; J G Oakeshott ; A. Papanikolaou ; O P Perera ; R V Rane ; S. Richards ; W T Tay ; T K Walsh ; A. Anderson ; C J Anderson ; S. Asgari ; P G Board ; A. Bretschneider ; P M Campbell ; T. Chertemps ; J T Christeller ; C W Coppin ; S J Downes ; G. Duan ; C A Farnsworth ; R T Good ; L B Han ; Y C Han ; K. Hatje ; I. Horne ; Y P Huang ; D S T. Hughes ; E. Jacquin-Joly ; W. James ; S. Jhangiani ; M. Kollmar ; S S Kuwar ; S. Li ; N-Y Liu ; M T Maibeche ; J R Miller ; N. Montagne ; T. Perry ; J. Qu ; S V Song ; G G Sutton ; H. Vogel ; B P Walenz ; W. Xu ; H-J Zhang ; Z. Zou ; P. Batterham ; O R Edwards ; R. Feyereisen ; R A Gibbs ; D G Heckel ; A. Mcgrath ; C. Robin ; S E Scherer ; K C Worley ; Y D WuSource :
- BMC biology [ 1741-7007 ] ; 2017.
Abstract
Helicoverpa armigera and Helicoverpa zea are major caterpillar pests of Old and New World agriculture, respectively. Both, particularly H. armigera, are extremely polyphagous, and H. armigera has developed resistance to many insecticides. Here we use comparative genomics, transcriptomics and resequencing to elucidate the genetic basis for their properties as pests.
DOI: 10.1186/s12915-017-0402-6
PubMed: 28756777
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species.</title><author><name sortKey="Pearce, S L" sort="Pearce, S L" uniqKey="Pearce S" first="S L" last="Pearce">S L Pearce</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Clarke, D F" sort="Clarke, D F" uniqKey="Clarke D" first="D F" last="Clarke">D F Clarke</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="East, P D" sort="East, P D" uniqKey="East P" first="P D" last="East">P D East</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Elfekih, S" sort="Elfekih, S" uniqKey="Elfekih S" first="S" last="Elfekih">S. Elfekih</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Gordon, K H J" sort="Gordon, K H J" uniqKey="Gordon K" first="K H J" last="Gordon">K H J. Gordon</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia. karl.gordon@csiro.au.</nlm:affiliation></affiliation></author><author><name sortKey="Jermiin, L S" sort="Jermiin, L S" uniqKey="Jermiin L" first="L S" last="Jermiin">L S Jermiin</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Mcgaughran, A" sort="Mcgaughran, A" uniqKey="Mcgaughran A" first="A" last="Mcgaughran">A. Mcgaughran</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Oakeshott, J G" sort="Oakeshott, J G" uniqKey="Oakeshott J" first="J G" last="Oakeshott">J G Oakeshott</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia. john.oakeshott@csiro.au.</nlm:affiliation></affiliation></author><author><name sortKey="Papanikolaou, A" sort="Papanikolaou, A" uniqKey="Papanikolaou A" first="A" last="Papanikolaou">A. Papanikolaou</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Perera, O P" sort="Perera, O P" uniqKey="Perera O" first="O P" last="Perera">O P Perera</name><affiliation><nlm:affiliation>Southern Insect Management Research Unit, USDA-ARS, Stoneville, MS, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Rane, R V" sort="Rane, R V" uniqKey="Rane R" first="R V" last="Rane">R V Rane</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Richards, S" sort="Richards, S" uniqKey="Richards S" first="S" last="Richards">S. Richards</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA. stephenr@bcm.edu.</nlm:affiliation></affiliation></author><author><name sortKey="Tay, W T" sort="Tay, W T" uniqKey="Tay W" first="W T" last="Tay">W T Tay</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Walsh, T K" sort="Walsh, T K" uniqKey="Walsh T" first="T K" last="Walsh">T K Walsh</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Anderson, A" sort="Anderson, A" uniqKey="Anderson A" first="A" last="Anderson">A. Anderson</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Anderson, C J" sort="Anderson, C J" uniqKey="Anderson C" first="C J" last="Anderson">C J Anderson</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Asgari, S" sort="Asgari, S" uniqKey="Asgari S" first="S" last="Asgari">S. Asgari</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Queensland, Brisbane St Lucia, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Board, P G" sort="Board, P G" uniqKey="Board P" first="P G" last="Board">P G Board</name><affiliation><nlm:affiliation>John Curtin School of Medical Research, Australian National University, Canberra, ACT, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Bretschneider, A" sort="Bretschneider, A" uniqKey="Bretschneider A" first="A" last="Bretschneider">A. Bretschneider</name><affiliation><nlm:affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Campbell, P M" sort="Campbell, P M" uniqKey="Campbell P" first="P M" last="Campbell">P M Campbell</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Chertemps, T" sort="Chertemps, T" uniqKey="Chertemps T" first="T" last="Chertemps">T. Chertemps</name><affiliation><nlm:affiliation>Sorbonnes Universités, UPMC Université Paris 06, Institute of Ecology and Environmental Sciences of Paris, Paris, France.</nlm:affiliation></affiliation></author><author><name sortKey="Christeller, J T" sort="Christeller, J T" uniqKey="Christeller J" first="J T" last="Christeller">J T Christeller</name><affiliation><nlm:affiliation>Plant and Food Research, Mt Albert, Auckland, New Zealand.</nlm:affiliation></affiliation></author><author><name sortKey="Coppin, C W" sort="Coppin, C W" uniqKey="Coppin C" first="C W" last="Coppin">C W Coppin</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Downes, S J" sort="Downes, S J" uniqKey="Downes S" first="S J" last="Downes">S J Downes</name><affiliation><nlm:affiliation>CSIRO, Narrabri, NSW, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Duan, G" sort="Duan, G" uniqKey="Duan G" first="G" last="Duan">G. Duan</name><affiliation><nlm:affiliation>Research School of Biology, Australian National University, Canberra, ACT, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Farnsworth, C A" sort="Farnsworth, C A" uniqKey="Farnsworth C" first="C A" last="Farnsworth">C A Farnsworth</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Good, R T" sort="Good, R T" uniqKey="Good R" first="R T" last="Good">R T Good</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Han, L B" sort="Han, L B" uniqKey="Han L" first="L B" last="Han">L B Han</name><affiliation><nlm:affiliation>State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, China.</nlm:affiliation></affiliation></author><author><name sortKey="Han, Y C" sort="Han, Y C" uniqKey="Han Y" first="Y C" last="Han">Y C Han</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Hatje, K" sort="Hatje, K" uniqKey="Hatje K" first="K" last="Hatje">K. Hatje</name><affiliation><nlm:affiliation>Max Planck Institute for Biophysical Chemistry, Gottingen, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Horne, I" sort="Horne, I" uniqKey="Horne I" first="I" last="Horne">I. Horne</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Huang, Y P" sort="Huang, Y P" uniqKey="Huang Y" first="Y P" last="Huang">Y P Huang</name><affiliation><nlm:affiliation>Institute of Plant Physiology and Ecology, Shanghai Institutes of Biological Sciences, Chinese Academy of Sciences, Shanghai, China.</nlm:affiliation></affiliation></author><author><name sortKey="Hughes, D S T" sort="Hughes, D S T" uniqKey="Hughes D" first="D S T" last="Hughes">D S T. Hughes</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Jacquin Joly, E" sort="Jacquin Joly, E" uniqKey="Jacquin Joly E" first="E" last="Jacquin-Joly">E. Jacquin-Joly</name><affiliation><nlm:affiliation>National Institute for Agricultural Research (INRA), Institute of Ecology and Environmental Sciences of Paris, Versailles, France.</nlm:affiliation></affiliation></author><author><name sortKey="James, W" sort="James, W" uniqKey="James W" first="W" last="James">W. James</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Jhangiani, S" sort="Jhangiani, S" uniqKey="Jhangiani S" first="S" last="Jhangiani">S. Jhangiani</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Kollmar, M" sort="Kollmar, M" uniqKey="Kollmar M" first="M" last="Kollmar">M. Kollmar</name><affiliation><nlm:affiliation>Max Planck Institute for Biophysical Chemistry, Gottingen, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Kuwar, S S" sort="Kuwar, S S" uniqKey="Kuwar S" first="S S" last="Kuwar">S S Kuwar</name><affiliation><nlm:affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Li, S" sort="Li, S" uniqKey="Li S" first="S" last="Li">S. Li</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Liu, N Y" sort="Liu, N Y" uniqKey="Liu N" first="N-Y" last="Liu">N-Y Liu</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Maibeche, M T" sort="Maibeche, M T" uniqKey="Maibeche M" first="M T" last="Maibeche">M T Maibeche</name><affiliation><nlm:affiliation>Sorbonnes Universités, UPMC Université Paris 06, Institute of Ecology and Environmental Sciences of Paris, Paris, France.</nlm:affiliation></affiliation></author><author><name sortKey="Miller, J R" sort="Miller, J R" uniqKey="Miller J" first="J R" last="Miller">J R Miller</name><affiliation><nlm:affiliation>J. Craig Venter Institute, Rockville, MD, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Montagne, N" sort="Montagne, N" uniqKey="Montagne N" first="N" last="Montagne">N. Montagne</name><affiliation><nlm:affiliation>Sorbonnes Universités, UPMC Université Paris 06, Institute of Ecology and Environmental Sciences of Paris, Paris, France.</nlm:affiliation></affiliation></author><author><name sortKey="Perry, T" sort="Perry, T" uniqKey="Perry T" first="T" last="Perry">T. Perry</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Qu, J" sort="Qu, J" uniqKey="Qu J" first="J" last="Qu">J. Qu</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Song, S V" sort="Song, S V" uniqKey="Song S" first="S V" last="Song">S V Song</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Sutton, G G" sort="Sutton, G G" uniqKey="Sutton G" first="G G" last="Sutton">G G Sutton</name><affiliation><nlm:affiliation>J. Craig Venter Institute, Rockville, MD, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Vogel, H" sort="Vogel, H" uniqKey="Vogel H" first="H" last="Vogel">H. Vogel</name><affiliation><nlm:affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Walenz, B P" sort="Walenz, B P" uniqKey="Walenz B" first="B P" last="Walenz">B P Walenz</name><affiliation><nlm:affiliation>J. Craig Venter Institute, Rockville, MD, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Xu, W" sort="Xu, W" uniqKey="Xu W" first="W" last="Xu">W. Xu</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Zhang, H J" sort="Zhang, H J" uniqKey="Zhang H" first="H-J" last="Zhang">H-J Zhang</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Zou, Z" sort="Zou, Z" uniqKey="Zou Z" first="Z" last="Zou">Z. Zou</name><affiliation><nlm:affiliation>State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, China.</nlm:affiliation></affiliation></author><author><name sortKey="Batterham, P" sort="Batterham, P" uniqKey="Batterham P" first="P" last="Batterham">P. Batterham</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Edwards, O R" sort="Edwards, O R" uniqKey="Edwards O" first="O R" last="Edwards">O R Edwards</name><affiliation><nlm:affiliation>CSIRO, Floreat Park, WA, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Feyereisen, R" sort="Feyereisen, R" uniqKey="Feyereisen R" first="R" last="Feyereisen">R. Feyereisen</name><affiliation><nlm:affiliation>Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej, Denmark.</nlm:affiliation></affiliation></author><author><name sortKey="Gibbs, R A" sort="Gibbs, R A" uniqKey="Gibbs R" first="R A" last="Gibbs">R A Gibbs</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Heckel, D G" sort="Heckel, D G" uniqKey="Heckel D" first="D G" last="Heckel">D G Heckel</name><affiliation><nlm:affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Mcgrath, A" sort="Mcgrath, A" uniqKey="Mcgrath A" first="A" last="Mcgrath">A. Mcgrath</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Robin, C" sort="Robin, C" uniqKey="Robin C" first="C" last="Robin">C. Robin</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Scherer, S E" sort="Scherer, S E" uniqKey="Scherer S" first="S E" last="Scherer">S E Scherer</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Worley, K C" sort="Worley, K C" uniqKey="Worley K" first="K C" last="Worley">K C Worley</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Wu, Y D" sort="Wu, Y D" uniqKey="Wu Y" first="Y D" last="Wu">Y D Wu</name><affiliation><nlm:affiliation>College of Plant Protection, Nanjing Agricultural University, Nanjing, Jiangsu, China.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2017">2017</date><idno type="RBID">pubmed:28756777</idno><idno type="pmid">28756777</idno><idno type="doi">10.1186/s12915-017-0402-6</idno><idno type="wicri:Area/PubMed/Corpus">000936</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000936</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species.</title><author><name sortKey="Pearce, S L" sort="Pearce, S L" uniqKey="Pearce S" first="S L" last="Pearce">S L Pearce</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Clarke, D F" sort="Clarke, D F" uniqKey="Clarke D" first="D F" last="Clarke">D F Clarke</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="East, P D" sort="East, P D" uniqKey="East P" first="P D" last="East">P D East</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Elfekih, S" sort="Elfekih, S" uniqKey="Elfekih S" first="S" last="Elfekih">S. Elfekih</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Gordon, K H J" sort="Gordon, K H J" uniqKey="Gordon K" first="K H J" last="Gordon">K H J. Gordon</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia. karl.gordon@csiro.au.</nlm:affiliation></affiliation></author><author><name sortKey="Jermiin, L S" sort="Jermiin, L S" uniqKey="Jermiin L" first="L S" last="Jermiin">L S Jermiin</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Mcgaughran, A" sort="Mcgaughran, A" uniqKey="Mcgaughran A" first="A" last="Mcgaughran">A. Mcgaughran</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Oakeshott, J G" sort="Oakeshott, J G" uniqKey="Oakeshott J" first="J G" last="Oakeshott">J G Oakeshott</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia. john.oakeshott@csiro.au.</nlm:affiliation></affiliation></author><author><name sortKey="Papanikolaou, A" sort="Papanikolaou, A" uniqKey="Papanikolaou A" first="A" last="Papanikolaou">A. Papanikolaou</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Perera, O P" sort="Perera, O P" uniqKey="Perera O" first="O P" last="Perera">O P Perera</name><affiliation><nlm:affiliation>Southern Insect Management Research Unit, USDA-ARS, Stoneville, MS, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Rane, R V" sort="Rane, R V" uniqKey="Rane R" first="R V" last="Rane">R V Rane</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Richards, S" sort="Richards, S" uniqKey="Richards S" first="S" last="Richards">S. Richards</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA. stephenr@bcm.edu.</nlm:affiliation></affiliation></author><author><name sortKey="Tay, W T" sort="Tay, W T" uniqKey="Tay W" first="W T" last="Tay">W T Tay</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Walsh, T K" sort="Walsh, T K" uniqKey="Walsh T" first="T K" last="Walsh">T K Walsh</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Anderson, A" sort="Anderson, A" uniqKey="Anderson A" first="A" last="Anderson">A. Anderson</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Anderson, C J" sort="Anderson, C J" uniqKey="Anderson C" first="C J" last="Anderson">C J Anderson</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Asgari, S" sort="Asgari, S" uniqKey="Asgari S" first="S" last="Asgari">S. Asgari</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Queensland, Brisbane St Lucia, QLD, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Board, P G" sort="Board, P G" uniqKey="Board P" first="P G" last="Board">P G Board</name><affiliation><nlm:affiliation>John Curtin School of Medical Research, Australian National University, Canberra, ACT, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Bretschneider, A" sort="Bretschneider, A" uniqKey="Bretschneider A" first="A" last="Bretschneider">A. Bretschneider</name><affiliation><nlm:affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Campbell, P M" sort="Campbell, P M" uniqKey="Campbell P" first="P M" last="Campbell">P M Campbell</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Chertemps, T" sort="Chertemps, T" uniqKey="Chertemps T" first="T" last="Chertemps">T. Chertemps</name><affiliation><nlm:affiliation>Sorbonnes Universités, UPMC Université Paris 06, Institute of Ecology and Environmental Sciences of Paris, Paris, France.</nlm:affiliation></affiliation></author><author><name sortKey="Christeller, J T" sort="Christeller, J T" uniqKey="Christeller J" first="J T" last="Christeller">J T Christeller</name><affiliation><nlm:affiliation>Plant and Food Research, Mt Albert, Auckland, New Zealand.</nlm:affiliation></affiliation></author><author><name sortKey="Coppin, C W" sort="Coppin, C W" uniqKey="Coppin C" first="C W" last="Coppin">C W Coppin</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Downes, S J" sort="Downes, S J" uniqKey="Downes S" first="S J" last="Downes">S J Downes</name><affiliation><nlm:affiliation>CSIRO, Narrabri, NSW, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Duan, G" sort="Duan, G" uniqKey="Duan G" first="G" last="Duan">G. Duan</name><affiliation><nlm:affiliation>Research School of Biology, Australian National University, Canberra, ACT, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Farnsworth, C A" sort="Farnsworth, C A" uniqKey="Farnsworth C" first="C A" last="Farnsworth">C A Farnsworth</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Good, R T" sort="Good, R T" uniqKey="Good R" first="R T" last="Good">R T Good</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Han, L B" sort="Han, L B" uniqKey="Han L" first="L B" last="Han">L B Han</name><affiliation><nlm:affiliation>State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, China.</nlm:affiliation></affiliation></author><author><name sortKey="Han, Y C" sort="Han, Y C" uniqKey="Han Y" first="Y C" last="Han">Y C Han</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Hatje, K" sort="Hatje, K" uniqKey="Hatje K" first="K" last="Hatje">K. Hatje</name><affiliation><nlm:affiliation>Max Planck Institute for Biophysical Chemistry, Gottingen, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Horne, I" sort="Horne, I" uniqKey="Horne I" first="I" last="Horne">I. Horne</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Huang, Y P" sort="Huang, Y P" uniqKey="Huang Y" first="Y P" last="Huang">Y P Huang</name><affiliation><nlm:affiliation>Institute of Plant Physiology and Ecology, Shanghai Institutes of Biological Sciences, Chinese Academy of Sciences, Shanghai, China.</nlm:affiliation></affiliation></author><author><name sortKey="Hughes, D S T" sort="Hughes, D S T" uniqKey="Hughes D" first="D S T" last="Hughes">D S T. Hughes</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Jacquin Joly, E" sort="Jacquin Joly, E" uniqKey="Jacquin Joly E" first="E" last="Jacquin-Joly">E. Jacquin-Joly</name><affiliation><nlm:affiliation>National Institute for Agricultural Research (INRA), Institute of Ecology and Environmental Sciences of Paris, Versailles, France.</nlm:affiliation></affiliation></author><author><name sortKey="James, W" sort="James, W" uniqKey="James W" first="W" last="James">W. James</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Jhangiani, S" sort="Jhangiani, S" uniqKey="Jhangiani S" first="S" last="Jhangiani">S. Jhangiani</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Kollmar, M" sort="Kollmar, M" uniqKey="Kollmar M" first="M" last="Kollmar">M. Kollmar</name><affiliation><nlm:affiliation>Max Planck Institute for Biophysical Chemistry, Gottingen, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Kuwar, S S" sort="Kuwar, S S" uniqKey="Kuwar S" first="S S" last="Kuwar">S S Kuwar</name><affiliation><nlm:affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Li, S" sort="Li, S" uniqKey="Li S" first="S" last="Li">S. Li</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Liu, N Y" sort="Liu, N Y" uniqKey="Liu N" first="N-Y" last="Liu">N-Y Liu</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Maibeche, M T" sort="Maibeche, M T" uniqKey="Maibeche M" first="M T" last="Maibeche">M T Maibeche</name><affiliation><nlm:affiliation>Sorbonnes Universités, UPMC Université Paris 06, Institute of Ecology and Environmental Sciences of Paris, Paris, France.</nlm:affiliation></affiliation></author><author><name sortKey="Miller, J R" sort="Miller, J R" uniqKey="Miller J" first="J R" last="Miller">J R Miller</name><affiliation><nlm:affiliation>J. Craig Venter Institute, Rockville, MD, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Montagne, N" sort="Montagne, N" uniqKey="Montagne N" first="N" last="Montagne">N. Montagne</name><affiliation><nlm:affiliation>Sorbonnes Universités, UPMC Université Paris 06, Institute of Ecology and Environmental Sciences of Paris, Paris, France.</nlm:affiliation></affiliation></author><author><name sortKey="Perry, T" sort="Perry, T" uniqKey="Perry T" first="T" last="Perry">T. Perry</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Qu, J" sort="Qu, J" uniqKey="Qu J" first="J" last="Qu">J. Qu</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Song, S V" sort="Song, S V" uniqKey="Song S" first="S V" last="Song">S V Song</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Sutton, G G" sort="Sutton, G G" uniqKey="Sutton G" first="G G" last="Sutton">G G Sutton</name><affiliation><nlm:affiliation>J. Craig Venter Institute, Rockville, MD, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Vogel, H" sort="Vogel, H" uniqKey="Vogel H" first="H" last="Vogel">H. Vogel</name><affiliation><nlm:affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Walenz, B P" sort="Walenz, B P" uniqKey="Walenz B" first="B P" last="Walenz">B P Walenz</name><affiliation><nlm:affiliation>J. Craig Venter Institute, Rockville, MD, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Xu, W" sort="Xu, W" uniqKey="Xu W" first="W" last="Xu">W. Xu</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Zhang, H J" sort="Zhang, H J" uniqKey="Zhang H" first="H-J" last="Zhang">H-J Zhang</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Zou, Z" sort="Zou, Z" uniqKey="Zou Z" first="Z" last="Zou">Z. Zou</name><affiliation><nlm:affiliation>State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, China.</nlm:affiliation></affiliation></author><author><name sortKey="Batterham, P" sort="Batterham, P" uniqKey="Batterham P" first="P" last="Batterham">P. Batterham</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Edwards, O R" sort="Edwards, O R" uniqKey="Edwards O" first="O R" last="Edwards">O R Edwards</name><affiliation><nlm:affiliation>CSIRO, Floreat Park, WA, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Feyereisen, R" sort="Feyereisen, R" uniqKey="Feyereisen R" first="R" last="Feyereisen">R. Feyereisen</name><affiliation><nlm:affiliation>Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej, Denmark.</nlm:affiliation></affiliation></author><author><name sortKey="Gibbs, R A" sort="Gibbs, R A" uniqKey="Gibbs R" first="R A" last="Gibbs">R A Gibbs</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Heckel, D G" sort="Heckel, D G" uniqKey="Heckel D" first="D G" last="Heckel">D G Heckel</name><affiliation><nlm:affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</nlm:affiliation></affiliation></author><author><name sortKey="Mcgrath, A" sort="Mcgrath, A" uniqKey="Mcgrath A" first="A" last="Mcgrath">A. Mcgrath</name><affiliation><nlm:affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Robin, C" sort="Robin, C" uniqKey="Robin C" first="C" last="Robin">C. Robin</name><affiliation><nlm:affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</nlm:affiliation></affiliation></author><author><name sortKey="Scherer, S E" sort="Scherer, S E" uniqKey="Scherer S" first="S E" last="Scherer">S E Scherer</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Worley, K C" sort="Worley, K C" uniqKey="Worley K" first="K C" last="Worley">K C Worley</name><affiliation><nlm:affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Wu, Y D" sort="Wu, Y D" uniqKey="Wu Y" first="Y D" last="Wu">Y D Wu</name><affiliation><nlm:affiliation>College of Plant Protection, Nanjing Agricultural University, Nanjing, Jiangsu, China.</nlm:affiliation></affiliation></author></analytic><series><title level="j">BMC biology</title><idno type="eISSN">1741-7007</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Helicoverpa armigera and Helicoverpa zea are major caterpillar pests of Old and New World agriculture, respectively. Both, particularly H. armigera, are extremely polyphagous, and H. armigera has developed resistance to many insecticides. Here we use comparative genomics, transcriptomics and resequencing to elucidate the genetic basis for their properties as pests.</div></front></TEI><pubmed><MedlineCitation Status="In-Process" Owner="NLM"><PMID Version="1">28756777</PMID><DateCreated><Year>2017</Year><Month>07</Month><Day>31</Day></DateCreated><DateRevised><Year>2017</Year><Month>08</Month><Day>19</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1741-7007</ISSN><JournalIssue CitedMedium="Internet"><Volume>15</Volume><Issue>1</Issue><PubDate><Year>2017</Year><Month>Jul</Month><Day>31</Day></PubDate></JournalIssue><Title>BMC biology</Title><ISOAbbreviation>BMC Biol.</ISOAbbreviation></Journal><ArticleTitle>Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species.</ArticleTitle><Pagination><MedlinePgn>63</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1186/s12915-017-0402-6</ELocationID><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Helicoverpa armigera and Helicoverpa zea are major caterpillar pests of Old and New World agriculture, respectively. Both, particularly H. armigera, are extremely polyphagous, and H. armigera has developed resistance to many insecticides. Here we use comparative genomics, transcriptomics and resequencing to elucidate the genetic basis for their properties as pests.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">We find that, prior to their divergence about 1.5 Mya, the H. armigera/H. zea lineage had accumulated up to more than 100 more members of specific detoxification and digestion gene families and more than 100 extra gustatory receptor genes, compared to other lepidopterans with narrower host ranges. The two genomes remain very similar in gene content and order, but H. armigera is more polymorphic overall, and H. zea has lost several detoxification genes, as well as about 50 gustatory receptor genes. It also lacks certain genes and alleles conferring insecticide resistance found in H. armigera. Non-synonymous sites in the expanded gene families above are rapidly diverging, both between paralogues and between orthologues in the two species. Whole genome transcriptomic analyses of H. armigera larvae show widely divergent responses to different host plants, including responses among many of the duplicated detoxification and digestion genes.</AbstractText><AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">The extreme polyphagy of the two heliothines is associated with extensive amplification and neofunctionalisation of genes involved in host finding and use, coupled with versatile transcriptional responses on different hosts. H. armigera's invasion of the Americas in recent years means that hybridisation could generate populations that are both locally adapted and insecticide resistant.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Pearce</LastName><ForeName>S L</ForeName><Initials>SL</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Clarke</LastName><ForeName>D F</ForeName><Initials>DF</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>East</LastName><ForeName>P D</ForeName><Initials>PD</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Elfekih</LastName><ForeName>S</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gordon</LastName><ForeName>K H J</ForeName><Initials>KHJ</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia. karl.gordon@csiro.au.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jermiin</LastName><ForeName>L S</ForeName><Initials>LS</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>McGaughran</LastName><ForeName>A</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Research School of Biology, Australian National University, Canberra, ACT, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Oakeshott</LastName><ForeName>J G</ForeName><Initials>JG</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia. john.oakeshott@csiro.au.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Papanikolaou</LastName><ForeName>A</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Hawksbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Perera</LastName><ForeName>O P</ForeName><Initials>OP</Initials><AffiliationInfo><Affiliation>Southern Insect Management Research Unit, USDA-ARS, Stoneville, MS, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rane</LastName><ForeName>R V</ForeName><Initials>RV</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Richards</LastName><ForeName>S</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA. stephenr@bcm.edu.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tay</LastName><ForeName>W T</ForeName><Initials>WT</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Walsh</LastName><ForeName>T K</ForeName><Initials>TK</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Anderson</LastName><ForeName>A</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Anderson</LastName><ForeName>C J</ForeName><Initials>CJ</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Biological and Environmental Sciences, University of Stirling, Stirling, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Asgari</LastName><ForeName>S</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>School of Biological Sciences, University of Queensland, Brisbane St Lucia, QLD, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Board</LastName><ForeName>P G</ForeName><Initials>PG</Initials><AffiliationInfo><Affiliation>John Curtin School of Medical Research, Australian National University, Canberra, ACT, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bretschneider</LastName><ForeName>A</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Campbell</LastName><ForeName>P M</ForeName><Initials>PM</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chertemps</LastName><ForeName>T</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Sorbonnes Universités, UPMC Université Paris 06, Institute of Ecology and Environmental Sciences of Paris, Paris, France.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>National Institute for Agricultural Research (INRA), Institute of Ecology and Environmental Sciences of Paris, Versailles, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Christeller</LastName><ForeName>J T</ForeName><Initials>JT</Initials><AffiliationInfo><Affiliation>Plant and Food Research, Mt Albert, Auckland, New Zealand.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Coppin</LastName><ForeName>C W</ForeName><Initials>CW</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Downes</LastName><ForeName>S J</ForeName><Initials>SJ</Initials><AffiliationInfo><Affiliation>CSIRO, Narrabri, NSW, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Duan</LastName><ForeName>G</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Research School of Biology, Australian National University, Canberra, ACT, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Farnsworth</LastName><ForeName>C A</ForeName><Initials>CA</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Good</LastName><ForeName>R T</ForeName><Initials>RT</Initials><AffiliationInfo><Affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Han</LastName><ForeName>L B</ForeName><Initials>LB</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Han</LastName><ForeName>Y C</ForeName><Initials>YC</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>College of Plant Protection, Nanjing Agricultural University, Nanjing, Jiangsu, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hatje</LastName><ForeName>K</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Max Planck Institute for Biophysical Chemistry, Gottingen, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Horne</LastName><ForeName>I</ForeName><Initials>I</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Huang</LastName><ForeName>Y P</ForeName><Initials>YP</Initials><AffiliationInfo><Affiliation>Institute of Plant Physiology and Ecology, Shanghai Institutes of Biological Sciences, Chinese Academy of Sciences, Shanghai, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hughes</LastName><ForeName>D S T</ForeName><Initials>DST</Initials><AffiliationInfo><Affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jacquin-Joly</LastName><ForeName>E</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>National Institute for Agricultural Research (INRA), Institute of Ecology and Environmental Sciences of Paris, Versailles, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>James</LastName><ForeName>W</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jhangiani</LastName><ForeName>S</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kollmar</LastName><ForeName>M</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Max Planck Institute for Biophysical Chemistry, Gottingen, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kuwar</LastName><ForeName>S S</ForeName><Initials>SS</Initials><AffiliationInfo><Affiliation>Max Planck Institute of Chemical Ecology, Jena, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Li</LastName><ForeName>S</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Liu</LastName><ForeName>N-Y</ForeName><Initials>NY</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Key Laboratory of Forest Disaster Warning and Control of Yunnan Province, Southwest Forestry University, Kunming, 650224, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Maibeche</LastName><ForeName>M T</ForeName><Initials>MT</Initials><AffiliationInfo><Affiliation>Sorbonnes Universités, UPMC Université Paris 06, Institute of Ecology and Environmental Sciences of Paris, Paris, France.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>National Institute for Agricultural Research (INRA), Institute of Ecology and Environmental Sciences of Paris, Versailles, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Miller</LastName><ForeName>J R</ForeName><Initials>JR</Initials><AffiliationInfo><Affiliation>J. Craig Venter Institute, Rockville, MD, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Montagne</LastName><ForeName>N</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Sorbonnes Universités, UPMC Université Paris 06, Institute of Ecology and Environmental Sciences of Paris, Paris, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Perry</LastName><ForeName>T</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Qu</LastName><ForeName>J</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Song</LastName><ForeName>S V</ForeName><Initials>SV</Initials><AffiliationInfo><Affiliation>School of Biological Sciences, University of Melbourne, Parkville, Vic, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sutton</LastName><ForeName>G G</ForeName><Initials>GG</Initials><AffiliationInfo><Affiliation>J. 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Craig Venter Institute, Rockville, MD, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xu</LastName><ForeName>W</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>School of Veterinary and Life Sciences, Murdoch University, Perth, WA, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>H-J</ForeName><Initials>HJ</Initials><AffiliationInfo><Affiliation>CSIRO Black Mountain, GPO Box 1700, Canberra, ACT, 2600, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Chongqing Key Laboratory of Biochemistry and Molecular Pharmacology, Chongqing Medical University, Chongqing, 400016, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zou</LastName><ForeName>Z</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>State Key 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