Major Gene for Field Stem Rust Resistance Co-Locates with Resistance Gene Sr12 in 'Thatcher' Wheat.
Identifieur interne : 001B08 ( PubMed/Checkpoint ); précédent : 001B07; suivant : 001B09Major Gene for Field Stem Rust Resistance Co-Locates with Resistance Gene Sr12 in 'Thatcher' Wheat.
Auteurs : Colin W. Hiebert [Canada] ; James A. Kolmer [États-Unis] ; Curt A. Mccartney [Canada] ; Jordan Briggs [États-Unis] ; Tom Fetch [Canada] ; Harbans Bariana [Australie] ; Frederic Choulet [France] ; Matthew N. Rouse [États-Unis] ; Wolfgang Spielmeyer [Australie]Source :
- PloS one [ 1932-6203 ] ; 2016.
Descripteurs français
- KwdFr :
- Basidiomycota (pathogénicité), Cartographie chromosomique, Chromosomes de plante, Génotype, Locus de caractère quantitatif (génétique), Maladies des plantes (génétique), Maladies des plantes (microbiologie), Phénotype, Plant (croissance et développement), Plant (génétique), Polymorphisme de nucléotide simple, Résistance à la maladie (génétique), Tiges de plante (croissance et développement), Tiges de plante (microbiologie), Triticum (croissance et développement), Triticum (génétique), Triticum (microbiologie), Épistasie.
- MESH :
- croissance et développement : Plant, Tiges de plante, Triticum.
- génétique : Locus de caractère quantitatif, Maladies des plantes, Plant, Résistance à la maladie, Triticum.
- microbiologie : Maladies des plantes, Tiges de plante, Triticum.
- pathogénicité : Basidiomycota.
- Cartographie chromosomique, Chromosomes de plante, Génotype, Phénotype, Polymorphisme de nucléotide simple, Épistasie.
English descriptors
- KwdEn :
- Basidiomycota (pathogenicity), Chromosome Mapping, Chromosomes, Plant, Disease Resistance (genetics), Epistasis, Genetic, Genotype, Phenotype, Plant Diseases (genetics), Plant Diseases (microbiology), Plant Stems (growth & development), Plant Stems (microbiology), Polymorphism, Single Nucleotide, Quantitative Trait Loci (genetics), Seedlings (genetics), Seedlings (growth & development), Triticum (genetics), Triticum (growth & development), Triticum (microbiology).
- MESH :
- genetics : Disease Resistance, Plant Diseases, Quantitative Trait Loci, Seedlings, Triticum.
- growth & development : Plant Stems, Seedlings, Triticum.
- microbiology : Plant Diseases, Plant Stems, Triticum.
- pathogenicity : Basidiomycota.
- Chromosome Mapping, Chromosomes, Plant, Epistasis, Genetic, Genotype, Phenotype, Polymorphism, Single Nucleotide.
Abstract
Stem rust, caused by Puccinia graminis (Pgt), is a damaging disease of wheat that can be controlled by utilizing effective stem rust resistance genes. 'Thatcher' wheat carries complex resistance to stem rust that is enhanced in the presence of the resistance gene Lr34. The purpose of this study was to examine APR in 'Thatcher' and look for genetic interactions with Lr34. A RIL population was tested for stem rust resistance in field nurseries in Canada, USA, and Kenya. BSA was used to find SNP markers associated with reduced stem rust severity. A major QTL was identified on chromosome 3BL near the centromere in all environments. Seedling testing showed that Sr12 mapped to the same region as the QTL for APR. The SNP markers were physically mapped and the region carrying the resistance was searched for sequences with homology to members of the NB-LRR resistance gene family. SNP marker from one NB-LRR-like sequence, NB-LRR3 co-segregated with Sr12. Two additional populations, including one that lacked Lr34, were tested in field nurseries. NB-LRR3 mapped near the maximum LOD for reduction in stem rust severity in both populations. Lines from a population that segregated for Sr12 and Lr34 were tested for seedling Pgt biomass and infection type, as well as APR to field stem rust which showed an interaction between the genes. We concluded that Sr12, or a gene closely linked to Sr12, was responsible for 'Thatcher'-derived APR in several environments and this resistance was enhanced in the presence of Lr34.
DOI: 10.1371/journal.pone.0157029
PubMed: 27309724
Affiliations:
- Australie, Canada, France, États-Unis
- Auvergne (région administrative), Auvergne-Rhône-Alpes, Minnesota, Nouvelle-Galles du Sud
- Clermont-Ferrand, Sydney
- Université de Sydney
Links toward previous steps (curation, corpus...)
Links to Exploration step
pubmed:27309724Le document en format XML
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<term>Chromosome Mapping</term>
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<term>Disease Resistance (genetics)</term>
<term>Epistasis, Genetic</term>
<term>Genotype</term>
<term>Phenotype</term>
<term>Plant Diseases (genetics)</term>
<term>Plant Diseases (microbiology)</term>
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<term>Plant Stems (microbiology)</term>
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<term>Quantitative Trait Loci (genetics)</term>
<term>Seedlings (genetics)</term>
<term>Seedlings (growth & development)</term>
<term>Triticum (genetics)</term>
<term>Triticum (growth & development)</term>
<term>Triticum (microbiology)</term>
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<term>Cartographie chromosomique</term>
<term>Chromosomes de plante</term>
<term>Génotype</term>
<term>Locus de caractère quantitatif (génétique)</term>
<term>Maladies des plantes (génétique)</term>
<term>Maladies des plantes (microbiologie)</term>
<term>Phénotype</term>
<term>Plant (croissance et développement)</term>
<term>Plant (génétique)</term>
<term>Polymorphisme de nucléotide simple</term>
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<term>Tiges de plante (microbiologie)</term>
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<term>Triticum</term>
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<term>Triticum</term>
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<front><div type="abstract" xml:lang="en">Stem rust, caused by Puccinia graminis (Pgt), is a damaging disease of wheat that can be controlled by utilizing effective stem rust resistance genes. 'Thatcher' wheat carries complex resistance to stem rust that is enhanced in the presence of the resistance gene Lr34. The purpose of this study was to examine APR in 'Thatcher' and look for genetic interactions with Lr34. A RIL population was tested for stem rust resistance in field nurseries in Canada, USA, and Kenya. BSA was used to find SNP markers associated with reduced stem rust severity. A major QTL was identified on chromosome 3BL near the centromere in all environments. Seedling testing showed that Sr12 mapped to the same region as the QTL for APR. The SNP markers were physically mapped and the region carrying the resistance was searched for sequences with homology to members of the NB-LRR resistance gene family. SNP marker from one NB-LRR-like sequence, NB-LRR3 co-segregated with Sr12. Two additional populations, including one that lacked Lr34, were tested in field nurseries. NB-LRR3 mapped near the maximum LOD for reduction in stem rust severity in both populations. Lines from a population that segregated for Sr12 and Lr34 were tested for seedling Pgt biomass and infection type, as well as APR to field stem rust which showed an interaction between the genes. We concluded that Sr12, or a gene closely linked to Sr12, was responsible for 'Thatcher'-derived APR in several environments and this resistance was enhanced in the presence of Lr34.</div>
</front>
</TEI>
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<DateCreated><Year>2016</Year>
<Month>06</Month>
<Day>17</Day>
</DateCreated>
<DateCompleted><Year>2017</Year>
<Month>07</Month>
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<Title>PloS one</Title>
<ISOAbbreviation>PLoS ONE</ISOAbbreviation>
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<ArticleTitle>Major Gene for Field Stem Rust Resistance Co-Locates with Resistance Gene Sr12 in 'Thatcher' Wheat.</ArticleTitle>
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<ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0157029</ELocationID>
<Abstract><AbstractText>Stem rust, caused by Puccinia graminis (Pgt), is a damaging disease of wheat that can be controlled by utilizing effective stem rust resistance genes. 'Thatcher' wheat carries complex resistance to stem rust that is enhanced in the presence of the resistance gene Lr34. The purpose of this study was to examine APR in 'Thatcher' and look for genetic interactions with Lr34. A RIL population was tested for stem rust resistance in field nurseries in Canada, USA, and Kenya. BSA was used to find SNP markers associated with reduced stem rust severity. A major QTL was identified on chromosome 3BL near the centromere in all environments. Seedling testing showed that Sr12 mapped to the same region as the QTL for APR. The SNP markers were physically mapped and the region carrying the resistance was searched for sequences with homology to members of the NB-LRR resistance gene family. SNP marker from one NB-LRR-like sequence, NB-LRR3 co-segregated with Sr12. Two additional populations, including one that lacked Lr34, were tested in field nurseries. NB-LRR3 mapped near the maximum LOD for reduction in stem rust severity in both populations. Lines from a population that segregated for Sr12 and Lr34 were tested for seedling Pgt biomass and infection type, as well as APR to field stem rust which showed an interaction between the genes. We concluded that Sr12, or a gene closely linked to Sr12, was responsible for 'Thatcher'-derived APR in several environments and this resistance was enhanced in the presence of Lr34.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Hiebert</LastName>
<ForeName>Colin W</ForeName>
<Initials>CW</Initials>
<AffiliationInfo><Affiliation>Agriculture and Agri-Food Canada, Cereal Research Centre, Morden, Manitoba, Canada.</Affiliation>
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<Initials>JA</Initials>
<AffiliationInfo><Affiliation>Department of Plant Pathology, University of Minnesota, Saint Paul, Minnesota, United States of America.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>United States Department of Agriculture-Agriculture Research Service, Cereal Disease Laboratory, Saint Paul, Minnesota, United States of America.</Affiliation>
</AffiliationInfo>
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<Author ValidYN="Y"><LastName>McCartney</LastName>
<ForeName>Curt A</ForeName>
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<AffiliationInfo><Affiliation>Agriculture and Agri-Food Canada, Cereal Research Centre, Morden, Manitoba, Canada.</Affiliation>
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<ForeName>Jordan</ForeName>
<Initials>J</Initials>
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</AffiliationInfo>
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</AffiliationInfo>
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</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Choulet</LastName>
<ForeName>Frederic</ForeName>
<Initials>F</Initials>
<AffiliationInfo><Affiliation>INRA UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Clermont-Ferrand, France.</Affiliation>
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<AffiliationInfo><Affiliation>Department of Plant Pathology, University of Minnesota, Saint Paul, Minnesota, United States of America.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>United States Department of Agriculture-Agriculture Research Service, Cereal Disease Laboratory, Saint Paul, Minnesota, United States of America.</Affiliation>
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<ForeName>Wolfgang</ForeName>
<Initials>W</Initials>
<AffiliationInfo><Affiliation>Commonwealth Scientific and Industrial Research Organisation-Agriculture and Food, Canberra, Australian Capital Territory, Australia.</Affiliation>
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<Language>eng</Language>
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<Month>06</Month>
<Day>16</Day>
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<MeshHeadingList><MeshHeading><DescriptorName UI="D001487" MajorTopicYN="N">Basidiomycota</DescriptorName>
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<MeshHeading><DescriptorName UI="D002874" MajorTopicYN="N">Chromosome Mapping</DescriptorName>
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<MeshHeading><DescriptorName UI="D032461" MajorTopicYN="N">Chromosomes, Plant</DescriptorName>
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<MeshHeading><DescriptorName UI="D020641" MajorTopicYN="N">Polymorphism, Single Nucleotide</DescriptorName>
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<QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014908" MajorTopicYN="N">Triticum</DescriptorName>
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<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year>
<Month>01</Month>
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<PubMedPubDate PubStatus="accepted"><Year>2016</Year>
<Month>05</Month>
<Day>24</Day>
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<li>Canada</li>
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<li>États-Unis</li>
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<region><li>Auvergne (région administrative)</li>
<li>Auvergne-Rhône-Alpes</li>
<li>Minnesota</li>
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<name sortKey="Rouse, Matthew N" sort="Rouse, Matthew N" uniqKey="Rouse M" first="Matthew N" last="Rouse">Matthew N. Rouse</name>
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<country name="Australie"><region name="Nouvelle-Galles du Sud"><name sortKey="Bariana, Harbans" sort="Bariana, Harbans" uniqKey="Bariana H" first="Harbans" last="Bariana">Harbans Bariana</name>
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