Serveur d'exploration sur les relations entre la France et l'Australie

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Rhodenigma contortum, an obscure new genus and species of Rhodogorgonales (Rhodophyta) from Western Australia.

Identifieur interne : 001737 ( PubMed/Checkpoint ); précédent : 001736; suivant : 001738

Rhodenigma contortum, an obscure new genus and species of Rhodogorgonales (Rhodophyta) from Western Australia.

Auteurs : John A. West [Australie] ; Giuseppe C. Zuccarello [Nouvelle-Zélande] ; Susan Loiseaux De Goër [France] ; Lambros A. Stavrias [Australie] ; Heroen Verbruggen [Australie]

Source :

RBID : pubmed:27273532

Abstract

An unknown microscopic, branched filamentous red alga was isolated into culture from coral fragments collected in Coral Bay, Western Australia. It grew well unattached or attached to glass with no reproduction other than fragmentation of filaments. Cells of some branch tips became slightly contorted and digitated, possibly as a substrate-contact-response seen at filament tips of various algae. Attached multicellular compact disks on glass had a very different cellular configuration and size than the free filaments. In culture the filaments did not grow on or in coral fragments. Molecular phylogenies based on four markers (rbcL, cox1, 18S, 28S) clearly showed it belongs to the order Rhodogorgonales, as a sister clade of Renouxia. Based on these results, the alga is described as the new genus and species Rhodenigma contortum in the Rhodogorgonaceae. It had no morphological similarity to either of the other genera in Rhodogorgonaceae and illustrates the unknown diversity in cryptic habitats such as tropical coral rubble.

DOI: 10.1111/jpy.12402
PubMed: 27273532


Affiliations:


Links toward previous steps (curation, corpus...)


Links to Exploration step

pubmed:27273532

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Rhodenigma contortum, an obscure new genus and species of Rhodogorgonales (Rhodophyta) from Western Australia.</title>
<author>
<name sortKey="West, John A" sort="West, John A" uniqKey="West J" first="John A" last="West">John A. West</name>
<affiliation wicri:level="4">
<nlm:affiliation>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010</wicri:regionArea>
<orgName type="university">Université de Melbourne</orgName>
<placeName>
<settlement type="city">Melbourne</settlement>
<region type="état">Victoria (État)</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Zuccarello, Giuseppe C" sort="Zuccarello, Giuseppe C" uniqKey="Zuccarello G" first="Giuseppe C" last="Zuccarello">Giuseppe C. Zuccarello</name>
<affiliation wicri:level="1">
<nlm:affiliation>School of Biological Sciences, Victoria University of Wellington, Wellington, 6140, New Zealand.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>School of Biological Sciences, Victoria University of Wellington, Wellington, 6140</wicri:regionArea>
<wicri:noRegion>6140</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="De Goer, Susan Loiseaux" sort="De Goer, Susan Loiseaux" uniqKey="De Goer S" first="Susan Loiseaux" last="De Goër">Susan Loiseaux De Goër</name>
<affiliation wicri:level="1">
<nlm:affiliation>11 Rue des Moguerou, Roscoff, 29680, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>11 Rue des Moguerou, Roscoff, 29680</wicri:regionArea>
<wicri:noRegion>29680</wicri:noRegion>
<wicri:noRegion>29680</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Stavrias, Lambros A" sort="Stavrias, Lambros A" uniqKey="Stavrias L" first="Lambros A" last="Stavrias">Lambros A. Stavrias</name>
<affiliation wicri:level="4">
<nlm:affiliation>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010</wicri:regionArea>
<orgName type="university">Université de Melbourne</orgName>
<placeName>
<settlement type="city">Melbourne</settlement>
<region type="état">Victoria (État)</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Verbruggen, Heroen" sort="Verbruggen, Heroen" uniqKey="Verbruggen H" first="Heroen" last="Verbruggen">Heroen Verbruggen</name>
<affiliation wicri:level="4">
<nlm:affiliation>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010</wicri:regionArea>
<orgName type="university">Université de Melbourne</orgName>
<placeName>
<settlement type="city">Melbourne</settlement>
<region type="état">Victoria (État)</region>
</placeName>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2016">2016</date>
<idno type="RBID">pubmed:27273532</idno>
<idno type="pmid">27273532</idno>
<idno type="doi">10.1111/jpy.12402</idno>
<idno type="wicri:Area/PubMed/Corpus">001D86</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001D86</idno>
<idno type="wicri:Area/PubMed/Curation">001D62</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001D62</idno>
<idno type="wicri:Area/PubMed/Checkpoint">001D62</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001D62</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Rhodenigma contortum, an obscure new genus and species of Rhodogorgonales (Rhodophyta) from Western Australia.</title>
<author>
<name sortKey="West, John A" sort="West, John A" uniqKey="West J" first="John A" last="West">John A. West</name>
<affiliation wicri:level="4">
<nlm:affiliation>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010</wicri:regionArea>
<orgName type="university">Université de Melbourne</orgName>
<placeName>
<settlement type="city">Melbourne</settlement>
<region type="état">Victoria (État)</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Zuccarello, Giuseppe C" sort="Zuccarello, Giuseppe C" uniqKey="Zuccarello G" first="Giuseppe C" last="Zuccarello">Giuseppe C. Zuccarello</name>
<affiliation wicri:level="1">
<nlm:affiliation>School of Biological Sciences, Victoria University of Wellington, Wellington, 6140, New Zealand.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>School of Biological Sciences, Victoria University of Wellington, Wellington, 6140</wicri:regionArea>
<wicri:noRegion>6140</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="De Goer, Susan Loiseaux" sort="De Goer, Susan Loiseaux" uniqKey="De Goer S" first="Susan Loiseaux" last="De Goër">Susan Loiseaux De Goër</name>
<affiliation wicri:level="1">
<nlm:affiliation>11 Rue des Moguerou, Roscoff, 29680, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>11 Rue des Moguerou, Roscoff, 29680</wicri:regionArea>
<wicri:noRegion>29680</wicri:noRegion>
<wicri:noRegion>29680</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Stavrias, Lambros A" sort="Stavrias, Lambros A" uniqKey="Stavrias L" first="Lambros A" last="Stavrias">Lambros A. Stavrias</name>
<affiliation wicri:level="4">
<nlm:affiliation>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010</wicri:regionArea>
<orgName type="university">Université de Melbourne</orgName>
<placeName>
<settlement type="city">Melbourne</settlement>
<region type="état">Victoria (État)</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Verbruggen, Heroen" sort="Verbruggen, Heroen" uniqKey="Verbruggen H" first="Heroen" last="Verbruggen">Heroen Verbruggen</name>
<affiliation wicri:level="4">
<nlm:affiliation>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
<wicri:regionArea>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010</wicri:regionArea>
<orgName type="university">Université de Melbourne</orgName>
<placeName>
<settlement type="city">Melbourne</settlement>
<region type="état">Victoria (État)</region>
</placeName>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Journal of phycology</title>
<idno type="eISSN">1529-8817</idno>
<imprint>
<date when="2016" type="published">2016</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">An unknown microscopic, branched filamentous red alga was isolated into culture from coral fragments collected in Coral Bay, Western Australia. It grew well unattached or attached to glass with no reproduction other than fragmentation of filaments. Cells of some branch tips became slightly contorted and digitated, possibly as a substrate-contact-response seen at filament tips of various algae. Attached multicellular compact disks on glass had a very different cellular configuration and size than the free filaments. In culture the filaments did not grow on or in coral fragments. Molecular phylogenies based on four markers (rbcL, cox1, 18S, 28S) clearly showed it belongs to the order Rhodogorgonales, as a sister clade of Renouxia. Based on these results, the alga is described as the new genus and species Rhodenigma contortum in the Rhodogorgonaceae. It had no morphological similarity to either of the other genera in Rhodogorgonaceae and illustrates the unknown diversity in cryptic habitats such as tropical coral rubble.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="In-Process" Owner="NLM">
<PMID Version="1">27273532</PMID>
<DateCreated>
<Year>2016</Year>
<Month>06</Month>
<Day>09</Day>
</DateCreated>
<DateRevised>
<Year>2016</Year>
<Month>06</Month>
<Day>09</Day>
</DateRevised>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Electronic">1529-8817</ISSN>
<JournalIssue CitedMedium="Internet">
<Volume>52</Volume>
<Issue>3</Issue>
<PubDate>
<Year>2016</Year>
<Month>Jun</Month>
</PubDate>
</JournalIssue>
<Title>Journal of phycology</Title>
<ISOAbbreviation>J. Phycol.</ISOAbbreviation>
</Journal>
<ArticleTitle>Rhodenigma contortum, an obscure new genus and species of Rhodogorgonales (Rhodophyta) from Western Australia.</ArticleTitle>
<Pagination>
<MedlinePgn>397-403</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1111/jpy.12402</ELocationID>
<Abstract>
<AbstractText>An unknown microscopic, branched filamentous red alga was isolated into culture from coral fragments collected in Coral Bay, Western Australia. It grew well unattached or attached to glass with no reproduction other than fragmentation of filaments. Cells of some branch tips became slightly contorted and digitated, possibly as a substrate-contact-response seen at filament tips of various algae. Attached multicellular compact disks on glass had a very different cellular configuration and size than the free filaments. In culture the filaments did not grow on or in coral fragments. Molecular phylogenies based on four markers (rbcL, cox1, 18S, 28S) clearly showed it belongs to the order Rhodogorgonales, as a sister clade of Renouxia. Based on these results, the alga is described as the new genus and species Rhodenigma contortum in the Rhodogorgonaceae. It had no morphological similarity to either of the other genera in Rhodogorgonaceae and illustrates the unknown diversity in cryptic habitats such as tropical coral rubble.</AbstractText>
<CopyrightInformation>© 2016 Phycological Society of America.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>West</LastName>
<ForeName>John A</ForeName>
<Initials>JA</Initials>
<AffiliationInfo>
<Affiliation>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010, Australia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Zuccarello</LastName>
<ForeName>Giuseppe C</ForeName>
<Initials>GC</Initials>
<AffiliationInfo>
<Affiliation>School of Biological Sciences, Victoria University of Wellington, Wellington, 6140, New Zealand.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>de Goër</LastName>
<ForeName>Susan Loiseaux</ForeName>
<Initials>SL</Initials>
<AffiliationInfo>
<Affiliation>11 Rue des Moguerou, Roscoff, 29680, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Stavrias</LastName>
<ForeName>Lambros A</ForeName>
<Initials>LA</Initials>
<AffiliationInfo>
<Affiliation>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010, Australia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Verbruggen</LastName>
<ForeName>Heroen</ForeName>
<Initials>H</Initials>
<AffiliationInfo>
<Affiliation>School of Biosciences 2, University of Melbourne, Parkville, Victoria, 3010, Australia.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<DataBankList CompleteYN="Y">
<DataBank>
<DataBankName>GENBANK</DataBankName>
<AccessionNumberList>
<AccessionNumber>AF006089</AccessionNumber>
<AccessionNumber>AF419142</AccessionNumber>
<AccessionNumber>EF033584</AccessionNumber>
<AccessionNumber>EF033601</AccessionNumber>
<AccessionNumber>EF033602</AccessionNumber>
<AccessionNumber>HQ421906</AccessionNumber>
<AccessionNumber>KC130149</AccessionNumber>
<AccessionNumber>KC130151</AccessionNumber>
<AccessionNumber>KC134341</AccessionNumber>
<AccessionNumber>KC134345</AccessionNumber>
<AccessionNumber>KF186230</AccessionNumber>
<AccessionNumber>KM369010</AccessionNumber>
<AccessionNumber>KM369120</AccessionNumber>
<AccessionNumber>KM369121</AccessionNumber>
<AccessionNumber>KU762333</AccessionNumber>
<AccessionNumber>KU762334</AccessionNumber>
<AccessionNumber>KU762335</AccessionNumber>
<AccessionNumber>KU762336</AccessionNumber>
<AccessionNumber>U04181</AccessionNumber>
<AccessionNumber>U04183</AccessionNumber>
<AccessionNumber>U61253</AccessionNumber>
</AccessionNumberList>
</DataBank>
</DataBankList>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2016</Year>
<Month>04</Month>
<Day>14</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>United States</Country>
<MedlineTA>J Phycol</MedlineTA>
<NlmUniqueID>9882935</NlmUniqueID>
<ISSNLinking>0022-3646</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<KeywordList Owner="NOTNLM">
<Keyword MajorTopicYN="N">18S</Keyword>
<Keyword MajorTopicYN="N">28S</Keyword>
<Keyword MajorTopicYN="N">Australia</Keyword>
<Keyword MajorTopicYN="N">Coral Bay</Keyword>
<Keyword MajorTopicYN="N">Rhodenigma contortum</Keyword>
<Keyword MajorTopicYN="N">Rhodogorgonales</Keyword>
<Keyword MajorTopicYN="N">Rhodophyta</Keyword>
<Keyword MajorTopicYN="N">cox1</Keyword>
<Keyword MajorTopicYN="N">molecular phylogeny</Keyword>
<Keyword MajorTopicYN="N">psbA</Keyword>
<Keyword MajorTopicYN="N">rbcL</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="received">
<Year>2015</Year>
<Month>10</Month>
<Day>21</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted">
<Year>2016</Year>
<Month>01</Month>
<Day>19</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2016</Year>
<Month>6</Month>
<Day>9</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed">
<Year>2016</Year>
<Month>6</Month>
<Day>9</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2016</Year>
<Month>6</Month>
<Day>9</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">27273532</ArticleId>
<ArticleId IdType="doi">10.1111/jpy.12402</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
<affiliations>
<list>
<country>
<li>Australie</li>
<li>France</li>
<li>Nouvelle-Zélande</li>
</country>
<region>
<li>Victoria (État)</li>
</region>
<settlement>
<li>Melbourne</li>
</settlement>
<orgName>
<li>Université de Melbourne</li>
</orgName>
</list>
<tree>
<country name="Australie">
<region name="Victoria (État)">
<name sortKey="West, John A" sort="West, John A" uniqKey="West J" first="John A" last="West">John A. West</name>
</region>
<name sortKey="Stavrias, Lambros A" sort="Stavrias, Lambros A" uniqKey="Stavrias L" first="Lambros A" last="Stavrias">Lambros A. Stavrias</name>
<name sortKey="Verbruggen, Heroen" sort="Verbruggen, Heroen" uniqKey="Verbruggen H" first="Heroen" last="Verbruggen">Heroen Verbruggen</name>
</country>
<country name="Nouvelle-Zélande">
<noRegion>
<name sortKey="Zuccarello, Giuseppe C" sort="Zuccarello, Giuseppe C" uniqKey="Zuccarello G" first="Giuseppe C" last="Zuccarello">Giuseppe C. Zuccarello</name>
</noRegion>
</country>
<country name="France">
<noRegion>
<name sortKey="De Goer, Susan Loiseaux" sort="De Goer, Susan Loiseaux" uniqKey="De Goer S" first="Susan Loiseaux" last="De Goër">Susan Loiseaux De Goër</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Asie/explor/AustralieFrV1/Data/PubMed/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001737 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd -nk 001737 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Asie
   |area=    AustralieFrV1
   |flux=    PubMed
   |étape=   Checkpoint
   |type=    RBID
   |clé=     pubmed:27273532
   |texte=   Rhodenigma contortum, an obscure new genus and species of Rhodogorgonales (Rhodophyta) from Western Australia.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/RBID.i   -Sk "pubmed:27273532" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd   \
       | NlmPubMed2Wicri -a AustralieFrV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Dec 5 10:43:12 2017. Site generation: Tue Mar 5 14:07:20 2024