Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds.
Identifieur interne : 000E50 ( PubMed/Checkpoint ); précédent : 000E49; suivant : 000E51Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds.
Auteurs : Robert J. Schaefer [États-Unis] ; Mikkel Schubert [Danemark] ; Ernest Bailey [États-Unis] ; Danika L. Bannasch [États-Unis] ; Eric Barrey [France] ; Gila Kahila Bar-Gal [Israël] ; Gottfried Brem [Autriche] ; Samantha A. Brooks [États-Unis] ; Ottmar Distl [Allemagne] ; Ruedi Fries [Allemagne] ; Carrie J. Finno [États-Unis] ; Vinzenz Gerber [Suisse] ; Bianca Haase [Australie] ; Vidhya Jagannathan [Suisse] ; Ted Kalbfleisch [États-Unis] ; Tosso Leeb [Suisse] ; Gabriella Lindgren [Suède] ; Maria Susana Lopes [Portugal] ; Núria Mach [France] ; Artur Da Câmara Machado [Portugal] ; James N. Macleod [États-Unis] ; Annette Mccoy [États-Unis] ; Julia Metzger [Allemagne] ; Cecilia Penedo [États-Unis] ; Sagi Polani [Israël] ; Stefan Rieder [Suisse] ; Imke Tammen [Australie] ; Jens Tetens [Allemagne] ; Georg Thaller [Allemagne] ; Andrea Verini-Supplizi [Italie] ; Claire M. Wade [Australie] ; Barbara Wallner [Autriche] ; Ludovic Orlando [Danemark] ; James R. Mickelson [États-Unis] ; Molly E. Mccue [États-Unis]Source :
- BMC genomics [ 1471-2164 ] ; 2017.
Abstract
To date, genome-scale analyses in the domestic horse have been limited by suboptimal single nucleotide polymorphism (SNP) density and uneven genomic coverage of the current SNP genotyping arrays. The recent availability of whole genome sequences has created the opportunity to develop a next generation, high-density equine SNP array.
DOI: 10.1186/s12864-017-3943-8
PubMed: 28750625
Affiliations:
- Allemagne, Australie, Autriche, Danemark, France, Israël, Italie, Portugal, Suisse, Suède, États-Unis
- Basse-Saxe, Bavière, Californie, Canton de Berne, District de Haute-Bavière, Floride, Hovedstaden, Kentucky, Minnesota, Nouvelle-Galles du Sud, Vienne (Autriche)
- Berne, Copenhague, Hanovre, Munich, Sydney, Vienne (Autriche)
- Université Louis-et-Maximilien de Munich, Université de Berne, Université de Sydney
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Links to Exploration step
pubmed:28750625Le document en format XML
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KY, 40202, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biochemistry and Molecular Biology, School of Medicine, University of Louisville, Louisville, KY, 40202</wicri:regionArea><wicri:noRegion>40202</wicri:noRegion></affiliation></author><author><name sortKey="Leeb, Tosso" sort="Leeb, Tosso" uniqKey="Leeb T" first="Tosso" last="Leeb">Tosso Leeb</name><affiliation wicri:level="4"><nlm:affiliation>Institute of Genetics, University of Bern, 3001, Bern, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Institute of Genetics, University of Bern, 3001, Bern</wicri:regionArea><placeName><settlement type="city">Berne</settlement><region type="région" nuts="3">Canton de Berne</region><settlement type="city">Berne</settlement></placeName><orgName type="university">Université de Berne</orgName></affiliation></author><author><name sortKey="Lindgren, Gabriella" sort="Lindgren, Gabriella" uniqKey="Lindgren G" first="Gabriella" last="Lindgren">Gabriella Lindgren</name><affiliation wicri:level="1"><nlm:affiliation>Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.</nlm:affiliation><country xml:lang="fr">Suède</country><wicri:regionArea>Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala</wicri:regionArea><wicri:noRegion>Uppsala</wicri:noRegion></affiliation></author><author><name sortKey="Lopes, Maria Susana" sort="Lopes, Maria Susana" uniqKey="Lopes M" first="Maria Susana" last="Lopes">Maria Susana Lopes</name><affiliation wicri:level="1"><nlm:affiliation>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo, Portugal.</nlm:affiliation><country xml:lang="fr">Portugal</country><wicri:regionArea>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo</wicri:regionArea><wicri:noRegion>Angra do heroísmo</wicri:noRegion></affiliation></author><author><name sortKey="Mach, Nuria" sort="Mach, Nuria" uniqKey="Mach N" first="Núria" last="Mach">Núria Mach</name><affiliation wicri:level="1"><nlm:affiliation>Unité de Génétique Animale et Biologie Intégrative- UMR1313, INRA, Université Paris-Saclay, AgroParisTech, 78350, Jouy-en-Josas, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Unité de Génétique Animale et Biologie Intégrative- UMR1313, INRA, Université Paris-Saclay, AgroParisTech, 78350, Jouy-en-Josas</wicri:regionArea><wicri:noRegion>78350, Jouy-en-Josas</wicri:noRegion><wicri:noRegion>78350, Jouy-en-Josas</wicri:noRegion></affiliation></author><author><name sortKey="Da Camara Machado, Artur" sort="Da Camara Machado, Artur" uniqKey="Da Camara Machado A" first="Artur" last="Da Câmara Machado">Artur Da Câmara Machado</name><affiliation wicri:level="1"><nlm:affiliation>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo, Portugal.</nlm:affiliation><country xml:lang="fr">Portugal</country><wicri:regionArea>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo</wicri:regionArea><wicri:noRegion>Angra do heroísmo</wicri:noRegion></affiliation></author><author><name sortKey="Macleod, James N" sort="Macleod, James N" uniqKey="Macleod J" first="James N" last="Macleod">James N. Macleod</name><affiliation wicri:level="2"><nlm:affiliation>Maxwell H. Gluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Maxwell H. Gluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY</wicri:regionArea><placeName><region type="state">Kentucky</region></placeName></affiliation></author><author><name sortKey="Mccoy, Annette" sort="Mccoy, Annette" uniqKey="Mccoy A" first="Annette" last="Mccoy">Annette Mccoy</name><affiliation wicri:level="1"><nlm:affiliation>Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Champaign, IL, 61802, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Champaign, IL, 61802</wicri:regionArea><wicri:noRegion>61802</wicri:noRegion></affiliation></author><author><name sortKey="Metzger, Julia" sort="Metzger, Julia" uniqKey="Metzger J" first="Julia" last="Metzger">Julia Metzger</name><affiliation wicri:level="3"><nlm:affiliation>Institute for Animal Breeding and Genetics, University of Veterinary Medicine, Hannover, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute for Animal Breeding and Genetics, University of Veterinary Medicine, Hannover</wicri:regionArea><placeName><region type="land" nuts="2">Basse-Saxe</region><settlement type="city">Hanovre</settlement></placeName></affiliation></author><author><name sortKey="Penedo, Cecilia" sort="Penedo, Cecilia" uniqKey="Penedo C" first="Cecilia" last="Penedo">Cecilia Penedo</name><affiliation wicri:level="2"><nlm:affiliation>Veterinary Genetics Laboratory, University of California Davis, Davis, CA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Veterinary Genetics Laboratory, University of California Davis, Davis, CA</wicri:regionArea><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Polani, Sagi" sort="Polani, Sagi" uniqKey="Polani S" first="Sagi" last="Polani">Sagi Polani</name><affiliation wicri:level="1"><nlm:affiliation>The Robert H. Smith Faculty of Agriculture, Food and Environment, The Koret School of Veterinary Medicine, The Hebrew University, 76100, Rehovot, Israel.</nlm:affiliation><country xml:lang="fr">Israël</country><wicri:regionArea>The Robert H. Smith Faculty of Agriculture, Food and Environment, The Koret School of Veterinary Medicine, The Hebrew University, 76100, Rehovot</wicri:regionArea><wicri:noRegion>Rehovot</wicri:noRegion></affiliation></author><author><name sortKey="Rieder, Stefan" sort="Rieder, Stefan" uniqKey="Rieder S" first="Stefan" last="Rieder">Stefan Rieder</name><affiliation wicri:level="1"><nlm:affiliation>Agroscope, Swiss National Stud Farm, 1580, Avenches, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Agroscope, Swiss National Stud Farm, 1580, Avenches</wicri:regionArea><wicri:noRegion>Avenches</wicri:noRegion></affiliation></author><author><name sortKey="Tammen, Imke" sort="Tammen, Imke" uniqKey="Tammen I" first="Imke" last="Tammen">Imke Tammen</name><affiliation wicri:level="4"><nlm:affiliation>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Tetens, Jens" sort="Tetens, Jens" uniqKey="Tetens J" first="Jens" last="Tetens">Jens Tetens</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel</wicri:regionArea><wicri:noRegion>24098, Kiel</wicri:noRegion><wicri:noRegion>24098, Kiel</wicri:noRegion><wicri:noRegion>Kiel</wicri:noRegion></affiliation></author><author><name sortKey="Thaller, Georg" sort="Thaller, Georg" uniqKey="Thaller G" first="Georg" last="Thaller">Georg Thaller</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel</wicri:regionArea><wicri:noRegion>24098, Kiel</wicri:noRegion><wicri:noRegion>24098, Kiel</wicri:noRegion><wicri:noRegion>Kiel</wicri:noRegion></affiliation></author><author><name sortKey="Verini Supplizi, Andrea" sort="Verini Supplizi, Andrea" uniqKey="Verini Supplizi A" first="Andrea" last="Verini-Supplizi">Andrea Verini-Supplizi</name><affiliation wicri:level="1"><nlm:affiliation>Department of Veterinary Medicine - Sport Horse Research Centre, University of Perugia, Perugia, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Veterinary Medicine - Sport Horse Research Centre, University of Perugia, Perugia</wicri:regionArea><wicri:noRegion>Perugia</wicri:noRegion></affiliation></author><author><name sortKey="Wade, Claire M" sort="Wade, Claire M" uniqKey="Wade C" first="Claire M" last="Wade">Claire M. Wade</name><affiliation wicri:level="4"><nlm:affiliation>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Wallner, Barbara" sort="Wallner, Barbara" uniqKey="Wallner B" first="Barbara" last="Wallner">Barbara Wallner</name><affiliation wicri:level="3"><nlm:affiliation>Institute of Animal Breeding and Genetics, Department of Biomedical Sciences, University of Veterinary Medicine Vienna, Vienna, Austria.</nlm:affiliation><country xml:lang="fr">Autriche</country><wicri:regionArea>Institute of Animal Breeding and Genetics, Department of Biomedical Sciences, University of Veterinary Medicine Vienna, Vienna</wicri:regionArea><placeName><settlement type="city">Vienne (Autriche)</settlement><region nuts="2" type="province">Vienne (Autriche)</region></placeName></affiliation></author><author><name sortKey="Orlando, Ludovic" sort="Orlando, Ludovic" uniqKey="Orlando L" first="Ludovic" last="Orlando">Ludovic Orlando</name><affiliation wicri:level="3"><nlm:affiliation>Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.</nlm:affiliation><country xml:lang="fr">Danemark</country><wicri:regionArea>Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen</wicri:regionArea><placeName><settlement type="city">Copenhague</settlement><region type="région" nuts="2">Hovedstaden</region></placeName></affiliation></author><author><name sortKey="Mickelson, James R" sort="Mickelson, James R" uniqKey="Mickelson J" first="James R" last="Mickelson">James R. Mickelson</name><affiliation wicri:level="2"><nlm:affiliation>Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, St. Paul, MN</wicri:regionArea><placeName><region type="state">Minnesota</region></placeName></affiliation></author><author><name sortKey="Mccue, Molly E" sort="Mccue, Molly E" uniqKey="Mccue M" first="Molly E" last="Mccue">Molly E. Mccue</name><affiliation wicri:level="2"><nlm:affiliation>Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA. mccu0173@umn.edu.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN</wicri:regionArea><placeName><region type="state">Minnesota</region></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2017">2017</date><idno type="RBID">pubmed:28750625</idno><idno type="pmid">28750625</idno><idno type="doi">10.1186/s12864-017-3943-8</idno><idno type="wicri:Area/PubMed/Corpus">000942</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000942</idno><idno type="wicri:Area/PubMed/Curation">000939</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000939</idno><idno type="wicri:Area/PubMed/Checkpoint">000939</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000939</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds.</title><author><name sortKey="Schaefer, Robert J" sort="Schaefer, Robert J" uniqKey="Schaefer R" first="Robert J" last="Schaefer">Robert J. Schaefer</name><affiliation wicri:level="2"><nlm:affiliation>Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN</wicri:regionArea><placeName><region type="state">Minnesota</region></placeName></affiliation></author><author><name sortKey="Schubert, Mikkel" sort="Schubert, Mikkel" uniqKey="Schubert M" first="Mikkel" last="Schubert">Mikkel Schubert</name><affiliation wicri:level="3"><nlm:affiliation>Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.</nlm:affiliation><country xml:lang="fr">Danemark</country><wicri:regionArea>Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen</wicri:regionArea><placeName><settlement type="city">Copenhague</settlement><region type="région" nuts="2">Hovedstaden</region></placeName></affiliation></author><author><name sortKey="Bailey, Ernest" sort="Bailey, Ernest" uniqKey="Bailey E" first="Ernest" last="Bailey">Ernest Bailey</name><affiliation wicri:level="2"><nlm:affiliation>Maxwell H. Gluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Maxwell H. Gluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY</wicri:regionArea><placeName><region type="state">Kentucky</region></placeName></affiliation></author><author><name sortKey="Bannasch, Danika L" sort="Bannasch, Danika L" uniqKey="Bannasch D" first="Danika L" last="Bannasch">Danika L. Bannasch</name><affiliation wicri:level="1"><nlm:affiliation>School of Veterinary Medicine, University of California-Davis, Davis, CA, 95616, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Veterinary Medicine, University of California-Davis, Davis, CA, 95616</wicri:regionArea><wicri:noRegion>95616</wicri:noRegion></affiliation></author><author><name sortKey="Barrey, Eric" sort="Barrey, Eric" uniqKey="Barrey E" first="Eric" last="Barrey">Eric Barrey</name><affiliation wicri:level="1"><nlm:affiliation>Unité de Génétique Animale et Biologie Intégrative- UMR1313, INRA, Université Paris-Saclay, AgroParisTech, 78350, Jouy-en-Josas, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Unité de Génétique Animale et Biologie Intégrative- UMR1313, INRA, Université Paris-Saclay, AgroParisTech, 78350, Jouy-en-Josas</wicri:regionArea><wicri:noRegion>78350, Jouy-en-Josas</wicri:noRegion><wicri:noRegion>78350, Jouy-en-Josas</wicri:noRegion></affiliation></author><author><name sortKey="Bar Gal, Gila Kahila" sort="Bar Gal, Gila Kahila" uniqKey="Bar Gal G" first="Gila Kahila" last="Bar-Gal">Gila Kahila Bar-Gal</name><affiliation wicri:level="1"><nlm:affiliation>The Robert H. Smith Faculty of Agriculture, Food and Environment, The Koret School of Veterinary Medicine, The Hebrew University, 76100, Rehovot, Israel.</nlm:affiliation><country xml:lang="fr">Israël</country><wicri:regionArea>The Robert H. Smith Faculty of Agriculture, Food and Environment, The Koret School of Veterinary Medicine, The Hebrew University, 76100, Rehovot</wicri:regionArea><wicri:noRegion>Rehovot</wicri:noRegion></affiliation></author><author><name sortKey="Brem, Gottfried" sort="Brem, Gottfried" uniqKey="Brem G" first="Gottfried" last="Brem">Gottfried Brem</name><affiliation wicri:level="3"><nlm:affiliation>Institute of Animal Breeding and Genetics, Department of Biomedical Sciences, University of Veterinary Medicine Vienna, Vienna, Austria.</nlm:affiliation><country xml:lang="fr">Autriche</country><wicri:regionArea>Institute of Animal Breeding and Genetics, Department of Biomedical Sciences, University of Veterinary Medicine Vienna, Vienna</wicri:regionArea><placeName><settlement type="city">Vienne (Autriche)</settlement><region nuts="2" type="province">Vienne (Autriche)</region></placeName></affiliation></author><author><name sortKey="Brooks, Samantha A" sort="Brooks, Samantha A" uniqKey="Brooks S" first="Samantha A" last="Brooks">Samantha A. Brooks</name><affiliation wicri:level="2"><nlm:affiliation>Department of Animal Science, University of Florida, Gainesville, FL, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Animal Science, University of Florida, Gainesville, FL</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Distl, Ottmar" sort="Distl, Ottmar" uniqKey="Distl O" first="Ottmar" last="Distl">Ottmar Distl</name><affiliation wicri:level="3"><nlm:affiliation>Institute for Animal Breeding and Genetics, University of Veterinary Medicine, Hannover, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute for Animal Breeding and Genetics, University of Veterinary Medicine, Hannover</wicri:regionArea><placeName><region type="land" nuts="2">Basse-Saxe</region><settlement type="city">Hanovre</settlement></placeName></affiliation></author><author><name sortKey="Fries, Ruedi" sort="Fries, Ruedi" uniqKey="Fries R" first="Ruedi" last="Fries">Ruedi Fries</name><affiliation wicri:level="4"><nlm:affiliation>Lehrstuhl für Tierzucht der Technischen Universität München, Liesel-Beckmann-Strasse 1, 85354, Freising, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Lehrstuhl für Tierzucht der Technischen Universität München, Liesel-Beckmann-Strasse 1, 85354, Freising</wicri:regionArea><wicri:noRegion>85354, Freising</wicri:noRegion><orgName type="university">Université Louis-et-Maximilien de Munich</orgName><placeName><settlement type="city">Munich</settlement><region type="land" nuts="1">Bavière</region><region type="district" nuts="2">District de Haute-Bavière</region></placeName></affiliation></author><author><name sortKey="Finno, Carrie J" sort="Finno, Carrie J" uniqKey="Finno C" first="Carrie J" last="Finno">Carrie J. Finno</name><affiliation wicri:level="1"><nlm:affiliation>School of Veterinary Medicine, University of California-Davis, Davis, CA, 95616, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Veterinary Medicine, University of California-Davis, Davis, CA, 95616</wicri:regionArea><wicri:noRegion>95616</wicri:noRegion></affiliation></author><author><name sortKey="Gerber, Vinzenz" sort="Gerber, Vinzenz" uniqKey="Gerber V" first="Vinzenz" last="Gerber">Vinzenz Gerber</name><affiliation wicri:level="4"><nlm:affiliation>Swiss Institute of Equine Medicine, Department of Clinical Veterinary Medicine, Vetsuisse Faculty, University of Bern, and Agroscope, Länggassstrasse 124, 3001, Bern, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Swiss Institute of Equine Medicine, Department of Clinical Veterinary Medicine, Vetsuisse Faculty, University of Bern, and Agroscope, Länggassstrasse 124, 3001, Bern</wicri:regionArea><placeName><settlement type="city">Berne</settlement><region type="région" nuts="3">Canton de Berne</region><settlement type="city">Berne</settlement></placeName><orgName type="university">Université de Berne</orgName></affiliation></author><author><name sortKey="Haase, Bianca" sort="Haase, Bianca" uniqKey="Haase B" first="Bianca" last="Haase">Bianca Haase</name><affiliation wicri:level="4"><nlm:affiliation>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Jagannathan, Vidhya" sort="Jagannathan, Vidhya" uniqKey="Jagannathan V" first="Vidhya" last="Jagannathan">Vidhya Jagannathan</name><affiliation wicri:level="4"><nlm:affiliation>Institute of Genetics, University of Bern, 3001, Bern, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Institute of Genetics, University of Bern, 3001, Bern</wicri:regionArea><placeName><settlement type="city">Berne</settlement><region type="région" nuts="3">Canton de Berne</region><settlement type="city">Berne</settlement></placeName><orgName type="university">Université de Berne</orgName></affiliation></author><author><name sortKey="Kalbfleisch, Ted" sort="Kalbfleisch, Ted" uniqKey="Kalbfleisch T" first="Ted" last="Kalbfleisch">Ted Kalbfleisch</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biochemistry and Molecular Biology, School of Medicine, University of Louisville, Louisville, KY, 40202, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biochemistry and Molecular Biology, School of Medicine, University of Louisville, Louisville, KY, 40202</wicri:regionArea><wicri:noRegion>40202</wicri:noRegion></affiliation></author><author><name sortKey="Leeb, Tosso" sort="Leeb, Tosso" uniqKey="Leeb T" first="Tosso" last="Leeb">Tosso Leeb</name><affiliation wicri:level="4"><nlm:affiliation>Institute of Genetics, University of Bern, 3001, Bern, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Institute of Genetics, University of Bern, 3001, Bern</wicri:regionArea><placeName><settlement type="city">Berne</settlement><region type="région" nuts="3">Canton de Berne</region><settlement type="city">Berne</settlement></placeName><orgName type="university">Université de Berne</orgName></affiliation></author><author><name sortKey="Lindgren, Gabriella" sort="Lindgren, Gabriella" uniqKey="Lindgren G" first="Gabriella" last="Lindgren">Gabriella Lindgren</name><affiliation wicri:level="1"><nlm:affiliation>Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.</nlm:affiliation><country xml:lang="fr">Suède</country><wicri:regionArea>Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala</wicri:regionArea><wicri:noRegion>Uppsala</wicri:noRegion></affiliation></author><author><name sortKey="Lopes, Maria Susana" sort="Lopes, Maria Susana" uniqKey="Lopes M" first="Maria Susana" last="Lopes">Maria Susana Lopes</name><affiliation wicri:level="1"><nlm:affiliation>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo, Portugal.</nlm:affiliation><country xml:lang="fr">Portugal</country><wicri:regionArea>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo</wicri:regionArea><wicri:noRegion>Angra do heroísmo</wicri:noRegion></affiliation></author><author><name sortKey="Mach, Nuria" sort="Mach, Nuria" uniqKey="Mach N" first="Núria" last="Mach">Núria Mach</name><affiliation wicri:level="1"><nlm:affiliation>Unité de Génétique Animale et Biologie Intégrative- UMR1313, INRA, Université Paris-Saclay, AgroParisTech, 78350, Jouy-en-Josas, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Unité de Génétique Animale et Biologie Intégrative- UMR1313, INRA, Université Paris-Saclay, AgroParisTech, 78350, Jouy-en-Josas</wicri:regionArea><wicri:noRegion>78350, Jouy-en-Josas</wicri:noRegion><wicri:noRegion>78350, Jouy-en-Josas</wicri:noRegion></affiliation></author><author><name sortKey="Da Camara Machado, Artur" sort="Da Camara Machado, Artur" uniqKey="Da Camara Machado A" first="Artur" last="Da Câmara Machado">Artur Da Câmara Machado</name><affiliation wicri:level="1"><nlm:affiliation>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo, Portugal.</nlm:affiliation><country xml:lang="fr">Portugal</country><wicri:regionArea>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo</wicri:regionArea><wicri:noRegion>Angra do heroísmo</wicri:noRegion></affiliation></author><author><name sortKey="Macleod, James N" sort="Macleod, James N" uniqKey="Macleod J" first="James N" last="Macleod">James N. Macleod</name><affiliation wicri:level="2"><nlm:affiliation>Maxwell H. Gluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Maxwell H. Gluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY</wicri:regionArea><placeName><region type="state">Kentucky</region></placeName></affiliation></author><author><name sortKey="Mccoy, Annette" sort="Mccoy, Annette" uniqKey="Mccoy A" first="Annette" last="Mccoy">Annette Mccoy</name><affiliation wicri:level="1"><nlm:affiliation>Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Champaign, IL, 61802, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Champaign, IL, 61802</wicri:regionArea><wicri:noRegion>61802</wicri:noRegion></affiliation></author><author><name sortKey="Metzger, Julia" sort="Metzger, Julia" uniqKey="Metzger J" first="Julia" last="Metzger">Julia Metzger</name><affiliation wicri:level="3"><nlm:affiliation>Institute for Animal Breeding and Genetics, University of Veterinary Medicine, Hannover, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute for Animal Breeding and Genetics, University of Veterinary Medicine, Hannover</wicri:regionArea><placeName><region type="land" nuts="2">Basse-Saxe</region><settlement type="city">Hanovre</settlement></placeName></affiliation></author><author><name sortKey="Penedo, Cecilia" sort="Penedo, Cecilia" uniqKey="Penedo C" first="Cecilia" last="Penedo">Cecilia Penedo</name><affiliation wicri:level="2"><nlm:affiliation>Veterinary Genetics Laboratory, University of California Davis, Davis, CA, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Veterinary Genetics Laboratory, University of California Davis, Davis, CA</wicri:regionArea><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Polani, Sagi" sort="Polani, Sagi" uniqKey="Polani S" first="Sagi" last="Polani">Sagi Polani</name><affiliation wicri:level="1"><nlm:affiliation>The Robert H. Smith Faculty of Agriculture, Food and Environment, The Koret School of Veterinary Medicine, The Hebrew University, 76100, Rehovot, Israel.</nlm:affiliation><country xml:lang="fr">Israël</country><wicri:regionArea>The Robert H. Smith Faculty of Agriculture, Food and Environment, The Koret School of Veterinary Medicine, The Hebrew University, 76100, Rehovot</wicri:regionArea><wicri:noRegion>Rehovot</wicri:noRegion></affiliation></author><author><name sortKey="Rieder, Stefan" sort="Rieder, Stefan" uniqKey="Rieder S" first="Stefan" last="Rieder">Stefan Rieder</name><affiliation wicri:level="1"><nlm:affiliation>Agroscope, Swiss National Stud Farm, 1580, Avenches, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Agroscope, Swiss National Stud Farm, 1580, Avenches</wicri:regionArea><wicri:noRegion>Avenches</wicri:noRegion></affiliation></author><author><name sortKey="Tammen, Imke" sort="Tammen, Imke" uniqKey="Tammen I" first="Imke" last="Tammen">Imke Tammen</name><affiliation wicri:level="4"><nlm:affiliation>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Tetens, Jens" sort="Tetens, Jens" uniqKey="Tetens J" first="Jens" last="Tetens">Jens Tetens</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel</wicri:regionArea><wicri:noRegion>24098, Kiel</wicri:noRegion><wicri:noRegion>24098, Kiel</wicri:noRegion><wicri:noRegion>Kiel</wicri:noRegion></affiliation></author><author><name sortKey="Thaller, Georg" sort="Thaller, Georg" uniqKey="Thaller G" first="Georg" last="Thaller">Georg Thaller</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel</wicri:regionArea><wicri:noRegion>24098, Kiel</wicri:noRegion><wicri:noRegion>24098, Kiel</wicri:noRegion><wicri:noRegion>Kiel</wicri:noRegion></affiliation></author><author><name sortKey="Verini Supplizi, Andrea" sort="Verini Supplizi, Andrea" uniqKey="Verini Supplizi A" first="Andrea" last="Verini-Supplizi">Andrea Verini-Supplizi</name><affiliation wicri:level="1"><nlm:affiliation>Department of Veterinary Medicine - Sport Horse Research Centre, University of Perugia, Perugia, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Veterinary Medicine - Sport Horse Research Centre, University of Perugia, Perugia</wicri:regionArea><wicri:noRegion>Perugia</wicri:noRegion></affiliation></author><author><name sortKey="Wade, Claire M" sort="Wade, Claire M" uniqKey="Wade C" first="Claire M" last="Wade">Claire M. Wade</name><affiliation wicri:level="4"><nlm:affiliation>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006</wicri:regionArea><orgName type="university">Université de Sydney</orgName><placeName><settlement type="city">Sydney</settlement><region type="état">Nouvelle-Galles du Sud</region></placeName></affiliation></author><author><name sortKey="Wallner, Barbara" sort="Wallner, Barbara" uniqKey="Wallner B" first="Barbara" last="Wallner">Barbara Wallner</name><affiliation wicri:level="3"><nlm:affiliation>Institute of Animal Breeding and Genetics, Department of Biomedical Sciences, University of Veterinary Medicine Vienna, Vienna, Austria.</nlm:affiliation><country xml:lang="fr">Autriche</country><wicri:regionArea>Institute of Animal Breeding and Genetics, Department of Biomedical Sciences, University of Veterinary Medicine Vienna, Vienna</wicri:regionArea><placeName><settlement type="city">Vienne (Autriche)</settlement><region nuts="2" type="province">Vienne (Autriche)</region></placeName></affiliation></author><author><name sortKey="Orlando, Ludovic" sort="Orlando, Ludovic" uniqKey="Orlando L" first="Ludovic" last="Orlando">Ludovic Orlando</name><affiliation wicri:level="3"><nlm:affiliation>Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.</nlm:affiliation><country xml:lang="fr">Danemark</country><wicri:regionArea>Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen</wicri:regionArea><placeName><settlement type="city">Copenhague</settlement><region type="région" nuts="2">Hovedstaden</region></placeName></affiliation></author><author><name sortKey="Mickelson, James R" sort="Mickelson, James R" uniqKey="Mickelson J" first="James R" last="Mickelson">James R. Mickelson</name><affiliation wicri:level="2"><nlm:affiliation>Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, St. Paul, MN</wicri:regionArea><placeName><region type="state">Minnesota</region></placeName></affiliation></author><author><name sortKey="Mccue, Molly E" sort="Mccue, Molly E" uniqKey="Mccue M" first="Molly E" last="Mccue">Molly E. Mccue</name><affiliation wicri:level="2"><nlm:affiliation>Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA. mccu0173@umn.edu.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN</wicri:regionArea><placeName><region type="state">Minnesota</region></placeName></affiliation></author></analytic><series><title level="j">BMC genomics</title><idno type="eISSN">1471-2164</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">To date, genome-scale analyses in the domestic horse have been limited by suboptimal single nucleotide polymorphism (SNP) density and uneven genomic coverage of the current SNP genotyping arrays. The recent availability of whole genome sequences has created the opportunity to develop a next generation, high-density equine SNP array.</div></front></TEI><pubmed><MedlineCitation Status="In-Process" Owner="NLM"><PMID Version="1">28750625</PMID><DateCreated><Year>2017</Year><Month>07</Month><Day>28</Day></DateCreated><DateRevised><Year>2017</Year><Month>09</Month><Day>06</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1471-2164</ISSN><JournalIssue CitedMedium="Internet"><Volume>18</Volume><Issue>1</Issue><PubDate><Year>2017</Year><Month>Jul</Month><Day>27</Day></PubDate></JournalIssue><Title>BMC genomics</Title><ISOAbbreviation>BMC Genomics</ISOAbbreviation></Journal><ArticleTitle>Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds.</ArticleTitle><Pagination><MedlinePgn>565</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1186/s12864-017-3943-8</ELocationID><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">To date, genome-scale analyses in the domestic horse have been limited by suboptimal single nucleotide polymorphism (SNP) density and uneven genomic coverage of the current SNP genotyping arrays. The recent availability of whole genome sequences has created the opportunity to develop a next generation, high-density equine SNP array.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">Using whole genome sequence from 153 individuals representing 24 distinct breeds collated by the equine genomics community, we cataloged over 23 million de novo discovered genetic variants. Leveraging genotype data from individuals with both whole genome sequence, and genotypes from lower-density, legacy SNP arrays, a subset of ~5 million high-quality, high-density array candidate SNPs were selected based on breed representation and uniform spacing across the genome. Considering probe design recommendations from a commercial vendor (Affymetrix, now Thermo Fisher Scientific) a set of ~2 million SNPs were selected for a next-generation high-density SNP chip (MNEc2M). Genotype data were generated using the MNEc2M array from a cohort of 332 horses from 20 breeds and a lower-density array, consisting of ~670 thousand SNPs (MNEc670k), was designed for genotype imputation.</AbstractText><AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">Here, we document the steps taken to design both the MNEc2M and MNEc670k arrays, report genomic and technical properties of these genotyping platforms, and demonstrate the imputation capabilities of these tools for the domestic horse.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Schaefer</LastName><ForeName>Robert J</ForeName><Initials>RJ</Initials><AffiliationInfo><Affiliation>Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Schubert</LastName><ForeName>Mikkel</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bailey</LastName><ForeName>Ernest</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Maxwell H. Gluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bannasch</LastName><ForeName>Danika L</ForeName><Initials>DL</Initials><AffiliationInfo><Affiliation>School of Veterinary Medicine, University of California-Davis, Davis, CA, 95616, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Barrey</LastName><ForeName>Eric</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Unité de Génétique Animale et Biologie Intégrative- UMR1313, INRA, Université Paris-Saclay, AgroParisTech, 78350, Jouy-en-Josas, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bar-Gal</LastName><ForeName>Gila Kahila</ForeName><Initials>GK</Initials><AffiliationInfo><Affiliation>The Robert H. Smith Faculty of Agriculture, Food and Environment, The Koret School of Veterinary Medicine, The Hebrew University, 76100, Rehovot, Israel.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Brem</LastName><ForeName>Gottfried</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Institute of Animal Breeding and Genetics, Department of Biomedical Sciences, University of Veterinary Medicine Vienna, Vienna, Austria.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Brooks</LastName><ForeName>Samantha A</ForeName><Initials>SA</Initials><AffiliationInfo><Affiliation>Department of Animal Science, University of Florida, Gainesville, FL, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Distl</LastName><ForeName>Ottmar</ForeName><Initials>O</Initials><AffiliationInfo><Affiliation>Institute for Animal Breeding and Genetics, University of Veterinary Medicine, Hannover, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fries</LastName><ForeName>Ruedi</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Lehrstuhl für Tierzucht der Technischen Universität München, Liesel-Beckmann-Strasse 1, 85354, Freising, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Finno</LastName><ForeName>Carrie J</ForeName><Initials>CJ</Initials><AffiliationInfo><Affiliation>School of Veterinary Medicine, University of California-Davis, Davis, CA, 95616, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gerber</LastName><ForeName>Vinzenz</ForeName><Initials>V</Initials><AffiliationInfo><Affiliation>Swiss Institute of Equine Medicine, Department of Clinical Veterinary Medicine, Vetsuisse Faculty, University of Bern, and Agroscope, Länggassstrasse 124, 3001, Bern, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Haase</LastName><ForeName>Bianca</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jagannathan</LastName><ForeName>Vidhya</ForeName><Initials>V</Initials><AffiliationInfo><Affiliation>Institute of Genetics, University of Bern, 3001, Bern, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kalbfleisch</LastName><ForeName>Ted</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Department of Biochemistry and Molecular Biology, School of Medicine, University of Louisville, Louisville, KY, 40202, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Leeb</LastName><ForeName>Tosso</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Institute of Genetics, University of Bern, 3001, Bern, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lindgren</LastName><ForeName>Gabriella</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lopes</LastName><ForeName>Maria Susana</ForeName><Initials>MS</Initials><AffiliationInfo><Affiliation>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo, Portugal.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Mach</LastName><ForeName>Núria</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Unité de Génétique Animale et Biologie Intégrative- UMR1313, INRA, Université Paris-Saclay, AgroParisTech, 78350, Jouy-en-Josas, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>da Câmara Machado</LastName><ForeName>Artur</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Biotechnology Centre of Azores, University of Azores, Angra do heroísmo, Portugal.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>MacLeod</LastName><ForeName>James N</ForeName><Initials>JN</Initials><AffiliationInfo><Affiliation>Maxwell H. Gluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>McCoy</LastName><ForeName>Annette</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Champaign, IL, 61802, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Metzger</LastName><ForeName>Julia</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Institute for Animal Breeding and Genetics, University of Veterinary Medicine, Hannover, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Penedo</LastName><ForeName>Cecilia</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Veterinary Genetics Laboratory, University of California Davis, Davis, CA, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Polani</LastName><ForeName>Sagi</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>The Robert H. Smith Faculty of Agriculture, Food and Environment, The Koret School of Veterinary Medicine, The Hebrew University, 76100, Rehovot, Israel.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rieder</LastName><ForeName>Stefan</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Agroscope, Swiss National Stud Farm, 1580, Avenches, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tammen</LastName><ForeName>Imke</ForeName><Initials>I</Initials><AffiliationInfo><Affiliation>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tetens</LastName><ForeName>Jens</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel, Germany.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Animal Sciences, Functional Breeding Group, Georg-August University Göttingen, Burckhardtweg 2, 37077, Göttingen, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Thaller</LastName><ForeName>Georg</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Institute of Animal Breeding and Husbandry, Christian-Albrechts-University Kiel, Hermann-Rodewald-Strasse 6, 24098, Kiel, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Verini-Supplizi</LastName><ForeName>Andrea</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Veterinary Medicine - Sport Horse Research Centre, University of Perugia, Perugia, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wade</LastName><ForeName>Claire M</ForeName><Initials>CM</Initials><AffiliationInfo><Affiliation>School of Life and Environmental Sciences, Faculty of Veterinary Science, University of Sydney, Regimental Drive, B19-301 RMC Gunn, Sydney, NSW, 2006, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wallner</LastName><ForeName>Barbara</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>Institute of Animal Breeding and Genetics, Department of Biomedical Sciences, University of Veterinary Medicine Vienna, Vienna, Austria.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Orlando</LastName><ForeName>Ludovic</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Laboratoire d'Anthropobiologie Moléculaire et d'Imagerie de Synthèse, CNRS UMR 5288, Université de Toulouse, Université Paul Sabatier, 31000, Toulouse, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Mickelson</LastName><ForeName>James R</ForeName><Initials>JR</Initials><AffiliationInfo><Affiliation>Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>McCue</LastName><ForeName>Molly E</ForeName><Initials>ME</Initials><AffiliationInfo><Affiliation>Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA. mccu0173@umn.edu.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>K01 OD015134</GrantID><Acronym>OD</Acronym><Agency>NIH HHS</Agency><Country>United States</Country></Grant><Grant><GrantID>L40 TR001136</GrantID><Acronym>TR</Acronym><Agency>NCATS NIH HHS</Agency><Country>United States</Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal 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PubStatus="accepted"><Year>2017</Year><Month>07</Month><Day>13</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>7</Month><Day>29</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>7</Month><Day>29</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>7</Month><Day>29</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28750625</ArticleId><ArticleId IdType="doi">10.1186/s12864-017-3943-8</ArticleId><ArticleId IdType="pii">10.1186/s12864-017-3943-8</ArticleId><ArticleId IdType="pmc">PMC5530493</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Allemagne</li><li>Australie</li><li>Autriche</li><li>Danemark</li><li>France</li><li>Israël</li><li>Italie</li><li>Portugal</li><li>Suisse</li><li>Suède</li><li>États-Unis</li></country><region><li>Basse-Saxe</li><li>Bavière</li><li>Californie</li><li>Canton de Berne</li><li>District de Haute-Bavière</li><li>Floride</li><li>Hovedstaden</li><li>Kentucky</li><li>Minnesota</li><li>Nouvelle-Galles du Sud</li><li>Vienne (Autriche)</li></region><settlement><li>Berne</li><li>Copenhague</li><li>Hanovre</li><li>Munich</li><li>Sydney</li><li>Vienne (Autriche)</li></settlement><orgName><li>Université Louis-et-Maximilien de Munich</li><li>Université de Berne</li><li>Université de Sydney</li></orgName></list><tree><country name="États-Unis"><region name="Minnesota"><name sortKey="Schaefer, Robert J" sort="Schaefer, Robert J" uniqKey="Schaefer R" first="Robert J" last="Schaefer">Robert J. Schaefer</name></region><name sortKey="Bailey, Ernest" sort="Bailey, Ernest" uniqKey="Bailey E" first="Ernest" last="Bailey">Ernest Bailey</name><name sortKey="Bannasch, Danika L" sort="Bannasch, Danika L" uniqKey="Bannasch D" first="Danika L" last="Bannasch">Danika L. Bannasch</name><name sortKey="Brooks, Samantha A" sort="Brooks, Samantha A" uniqKey="Brooks S" first="Samantha A" last="Brooks">Samantha A. Brooks</name><name sortKey="Finno, Carrie J" sort="Finno, Carrie J" uniqKey="Finno C" first="Carrie J" last="Finno">Carrie J. Finno</name><name sortKey="Kalbfleisch, Ted" sort="Kalbfleisch, Ted" uniqKey="Kalbfleisch T" first="Ted" last="Kalbfleisch">Ted Kalbfleisch</name><name sortKey="Macleod, James N" sort="Macleod, James N" uniqKey="Macleod J" first="James N" last="Macleod">James N. Macleod</name><name sortKey="Mccoy, Annette" sort="Mccoy, Annette" uniqKey="Mccoy A" first="Annette" last="Mccoy">Annette Mccoy</name><name sortKey="Mccue, Molly E" sort="Mccue, Molly E" uniqKey="Mccue M" first="Molly E" last="Mccue">Molly E. Mccue</name><name sortKey="Mickelson, James R" sort="Mickelson, James R" uniqKey="Mickelson J" first="James R" last="Mickelson">James R. Mickelson</name><name sortKey="Penedo, Cecilia" sort="Penedo, Cecilia" uniqKey="Penedo C" first="Cecilia" last="Penedo">Cecilia Penedo</name></country><country name="Danemark"><region name="Hovedstaden"><name sortKey="Schubert, Mikkel" sort="Schubert, Mikkel" uniqKey="Schubert M" first="Mikkel" last="Schubert">Mikkel Schubert</name></region><name sortKey="Orlando, Ludovic" sort="Orlando, Ludovic" uniqKey="Orlando L" first="Ludovic" last="Orlando">Ludovic Orlando</name></country><country name="France"><noRegion><name sortKey="Barrey, Eric" sort="Barrey, Eric" uniqKey="Barrey E" first="Eric" last="Barrey">Eric Barrey</name></noRegion><name sortKey="Mach, Nuria" sort="Mach, Nuria" uniqKey="Mach N" first="Núria" last="Mach">Núria Mach</name></country><country name="Israël"><noRegion><name sortKey="Bar Gal, Gila Kahila" sort="Bar Gal, Gila Kahila" uniqKey="Bar Gal G" first="Gila Kahila" last="Bar-Gal">Gila Kahila Bar-Gal</name></noRegion><name sortKey="Polani, Sagi" sort="Polani, Sagi" uniqKey="Polani S" first="Sagi" last="Polani">Sagi Polani</name></country><country name="Autriche"><region name="Vienne (Autriche)"><name sortKey="Brem, Gottfried" sort="Brem, Gottfried" uniqKey="Brem G" first="Gottfried" last="Brem">Gottfried Brem</name></region><name sortKey="Wallner, Barbara" sort="Wallner, Barbara" uniqKey="Wallner B" first="Barbara" last="Wallner">Barbara Wallner</name></country><country name="Allemagne"><region name="Basse-Saxe"><name sortKey="Distl, Ottmar" sort="Distl, Ottmar" uniqKey="Distl O" first="Ottmar" last="Distl">Ottmar Distl</name></region><name sortKey="Fries, Ruedi" sort="Fries, Ruedi" uniqKey="Fries R" first="Ruedi" last="Fries">Ruedi Fries</name><name sortKey="Metzger, Julia" sort="Metzger, Julia" uniqKey="Metzger J" first="Julia" last="Metzger">Julia Metzger</name><name sortKey="Tetens, Jens" sort="Tetens, Jens" uniqKey="Tetens J" first="Jens" last="Tetens">Jens Tetens</name><name sortKey="Thaller, Georg" sort="Thaller, Georg" uniqKey="Thaller G" first="Georg" last="Thaller">Georg Thaller</name></country><country name="Suisse"><region name="Canton de Berne"><name sortKey="Gerber, Vinzenz" sort="Gerber, Vinzenz" uniqKey="Gerber V" first="Vinzenz" last="Gerber">Vinzenz Gerber</name></region><name sortKey="Jagannathan, Vidhya" sort="Jagannathan, Vidhya" uniqKey="Jagannathan V" first="Vidhya" last="Jagannathan">Vidhya Jagannathan</name><name sortKey="Leeb, Tosso" sort="Leeb, Tosso" uniqKey="Leeb T" first="Tosso" last="Leeb">Tosso Leeb</name><name sortKey="Rieder, Stefan" sort="Rieder, Stefan" uniqKey="Rieder S" first="Stefan" last="Rieder">Stefan Rieder</name></country><country name="Australie"><region name="Nouvelle-Galles du Sud"><name sortKey="Haase, Bianca" sort="Haase, Bianca" uniqKey="Haase B" first="Bianca" last="Haase">Bianca Haase</name></region><name sortKey="Tammen, Imke" sort="Tammen, Imke" uniqKey="Tammen I" first="Imke" last="Tammen">Imke Tammen</name><name sortKey="Wade, Claire M" sort="Wade, Claire M" uniqKey="Wade C" first="Claire M" last="Wade">Claire M. Wade</name></country><country name="Suède"><noRegion><name sortKey="Lindgren, Gabriella" sort="Lindgren, Gabriella" uniqKey="Lindgren G" first="Gabriella" last="Lindgren">Gabriella Lindgren</name></noRegion></country><country name="Portugal"><noRegion><name sortKey="Lopes, Maria Susana" sort="Lopes, Maria Susana" uniqKey="Lopes M" first="Maria Susana" last="Lopes">Maria Susana Lopes</name></noRegion><name sortKey="Da Camara Machado, Artur" sort="Da Camara Machado, Artur" uniqKey="Da Camara Machado A" first="Artur" last="Da Câmara Machado">Artur Da Câmara Machado</name></country><country name="Italie"><noRegion><name sortKey="Verini Supplizi, Andrea" sort="Verini Supplizi, Andrea" uniqKey="Verini Supplizi A" first="Andrea" last="Verini-Supplizi">Andrea Verini-Supplizi</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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|texte= Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds.
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