European Chlamydia abortus livestock isolate genomes reveal unusual stability and limited diversity, reflected in geographical signatures.
Identifieur interne : 000C90 ( PubMed/Checkpoint ); précédent : 000C89; suivant : 000C91European Chlamydia abortus livestock isolate genomes reveal unusual stability and limited diversity, reflected in geographical signatures.
Auteurs : H M B. Seth-Smith [Royaume-Uni] ; Leonor Sánchez Bus [Royaume-Uni] ; M. Livingstone [Royaume-Uni] ; M. Sait [Royaume-Uni] ; S R Harris [Royaume-Uni] ; K D Aitchison [Royaume-Uni] ; Evangelia Vretou [Grèce] ; V I Siarkou [Grèce] ; K. Laroucau [France] ; K. Sachse [Allemagne] ; D. Longbottom [Royaume-Uni] ; N R Thomson [Royaume-Uni]Source :
- BMC genomics [ 1471-2164 ] ; 2017.
Descripteurs français
- KwdFr :
- Analyse de séquence d'ADN, Animaux, Annotation de séquence moléculaire, Chlamydia (génétique), Europe, Génome bactérien, Infections à Chlamydia (microbiologie), Infections à Chlamydia (médecine vétérinaire), Instabilité du génome, Maladies des ovins (microbiologie), Ovis, Ovis aries (microbiologie), Phylogéographie, Polymorphisme de nucléotide simple, Recombinaison génétique, Séquençage nucléotidique à haut débit, Variation génétique.
- MESH :
- génétique : Chlamydia.
- microbiologie : Infections à Chlamydia, Maladies des ovins, Ovis aries.
- médecine vétérinaire : Infections à Chlamydia.
- Analyse de séquence d'ADN, Animaux, Annotation de séquence moléculaire, Europe, Génome bactérien, Instabilité du génome, Ovis, Phylogéographie, Polymorphisme de nucléotide simple, Recombinaison génétique, Séquençage nucléotidique à haut débit, Variation génétique.
English descriptors
- KwdEn :
- Animals, Chlamydia (genetics), Chlamydia Infections (microbiology), Chlamydia Infections (veterinary), Europe, Genetic Variation, Genome, Bacterial, Genomic Instability, High-Throughput Nucleotide Sequencing, Molecular Sequence Annotation, Phylogeography, Polymorphism, Single Nucleotide, Recombination, Genetic, Sequence Analysis, DNA, Sheep, Sheep Diseases (microbiology), Sheep, Domestic (microbiology).
- MESH :
- genetics : Chlamydia.
- microbiology : Chlamydia Infections, Sheep Diseases, Sheep, Domestic.
- veterinary : Chlamydia Infections.
- Animals, Europe, Genetic Variation, Genome, Bacterial, Genomic Instability, High-Throughput Nucleotide Sequencing, Molecular Sequence Annotation, Phylogeography, Polymorphism, Single Nucleotide, Recombination, Genetic, Sequence Analysis, DNA, Sheep.
Abstract
Chlamydia abortus (formerly Chlamydophila abortus) is an economically important livestock pathogen, causing ovine enzootic abortion (OEA), and can also cause zoonotic infections in humans affecting pregnancy outcome. Large-scale genomic studies on other chlamydial species are giving insights into the biology of these organisms but have not yet been performed on C. abortus. Our aim was to investigate a broad collection of European isolates of C. abortus, using next generation sequencing methods, looking at diversity, geographic distribution and genome dynamics.
DOI: 10.1186/s12864-017-3657-y
PubMed: 28472926
Affiliations:
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Seth-Smith</name><affiliation wicri:level="1"><nlm:affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA</wicri:regionArea><wicri:noRegion>CB10 1SA</wicri:noRegion></affiliation></author><author><name sortKey="Bus, Leonor Sanchez" sort="Bus, Leonor Sanchez" uniqKey="Bus L" first="Leonor Sánchez" last="Bus">Leonor Sánchez Bus</name><affiliation wicri:level="1"><nlm:affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA</wicri:regionArea><wicri:noRegion>CB10 1SA</wicri:noRegion></affiliation></author><author><name sortKey="Livingstone, M" sort="Livingstone, M" uniqKey="Livingstone M" first="M" last="Livingstone">M. 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Laroucau</name><affiliation wicri:level="1"><nlm:affiliation>Anses, Animal Health Laboratory, Bacterial Zoonoses Unit, University Paris-Est, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Anses, Animal Health Laboratory, Bacterial Zoonoses Unit, University Paris-Est, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort</wicri:regionArea><wicri:noRegion>94701, Maisons-Alfort</wicri:noRegion><wicri:noRegion>94701, Maisons-Alfort</wicri:noRegion></affiliation></author><author><name sortKey="Sachse, K" sort="Sachse, K" uniqKey="Sachse K" first="K" last="Sachse">K. Sachse</name><affiliation wicri:level="1"><nlm:affiliation>Friedrich-Loeffler-Institute (Federal Research Institute for Animal Health), Institute of Molecular Pathogenesis, Naumburger Str. 96a, 07743, Jena, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Friedrich-Loeffler-Institute (Federal Research Institute for Animal Health), Institute of Molecular Pathogenesis, Naumburger Str. 96a, 07743, Jena</wicri:regionArea><wicri:noRegion>07743, Jena</wicri:noRegion><wicri:noRegion>07743, Jena</wicri:noRegion><wicri:noRegion>Jena</wicri:noRegion></affiliation></author><author><name sortKey="Longbottom, D" sort="Longbottom, D" uniqKey="Longbottom D" first="D" last="Longbottom">D. Longbottom</name><affiliation wicri:level="1"><nlm:affiliation>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ</wicri:regionArea><wicri:noRegion>EH26 0PZ</wicri:noRegion></affiliation></author><author><name sortKey="Thomson, N R" sort="Thomson, N R" uniqKey="Thomson N" first="N R" last="Thomson">N R Thomson</name><affiliation wicri:level="1"><nlm:affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK. nrt@sanger.ac.uk.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA</wicri:regionArea><wicri:noRegion>CB10 1SA</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2017">2017</date><idno type="RBID">pubmed:28472926</idno><idno type="pmid">28472926</idno><idno type="doi">10.1186/s12864-017-3657-y</idno><idno type="wicri:Area/PubMed/Corpus">000C91</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000C91</idno><idno type="wicri:Area/PubMed/Curation">000C88</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000C88</idno><idno type="wicri:Area/PubMed/Checkpoint">000C88</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000C88</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">European Chlamydia abortus livestock isolate genomes reveal unusual stability and limited diversity, reflected in geographical signatures.</title><author><name sortKey="Seth Smith, H M B" sort="Seth Smith, H M B" uniqKey="Seth Smith H" first="H M B" last="Seth-Smith">H M B. Seth-Smith</name><affiliation wicri:level="1"><nlm:affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA</wicri:regionArea><wicri:noRegion>CB10 1SA</wicri:noRegion></affiliation></author><author><name sortKey="Bus, Leonor Sanchez" sort="Bus, Leonor Sanchez" uniqKey="Bus L" first="Leonor Sánchez" last="Bus">Leonor Sánchez Bus</name><affiliation wicri:level="1"><nlm:affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA</wicri:regionArea><wicri:noRegion>CB10 1SA</wicri:noRegion></affiliation></author><author><name sortKey="Livingstone, M" sort="Livingstone, M" uniqKey="Livingstone M" first="M" last="Livingstone">M. Livingstone</name><affiliation wicri:level="1"><nlm:affiliation>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ</wicri:regionArea><wicri:noRegion>EH26 0PZ</wicri:noRegion></affiliation></author><author><name sortKey="Sait, M" sort="Sait, M" uniqKey="Sait M" first="M" last="Sait">M. Sait</name><affiliation wicri:level="1"><nlm:affiliation>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ</wicri:regionArea><wicri:noRegion>EH26 0PZ</wicri:noRegion></affiliation></author><author><name sortKey="Harris, S R" sort="Harris, S R" uniqKey="Harris S" first="S R" last="Harris">S R Harris</name><affiliation wicri:level="1"><nlm:affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA</wicri:regionArea><wicri:noRegion>CB10 1SA</wicri:noRegion></affiliation></author><author><name sortKey="Aitchison, K D" sort="Aitchison, K D" uniqKey="Aitchison K" first="K D" last="Aitchison">K D Aitchison</name><affiliation wicri:level="1"><nlm:affiliation>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ</wicri:regionArea><wicri:noRegion>EH26 0PZ</wicri:noRegion></affiliation></author><author><name sortKey="Vretou, Evangelia" sort="Vretou, Evangelia" uniqKey="Vretou E" first="Evangelia" last="Vretou">Evangelia Vretou</name><affiliation wicri:level="1"><nlm:affiliation>Retired: Formerly Laboratory of Biotechnology, Department of Microbiology, Hellenic Pasteur Institute, Athens, 115 21, Greece.</nlm:affiliation><country xml:lang="fr">Grèce</country><wicri:regionArea>Retired: Formerly Laboratory of Biotechnology, Department of Microbiology, Hellenic Pasteur Institute, Athens, 115 21</wicri:regionArea><wicri:noRegion>115 21</wicri:noRegion></affiliation></author><author><name sortKey="Siarkou, V I" sort="Siarkou, V I" uniqKey="Siarkou V" first="V I" last="Siarkou">V I Siarkou</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Microbiology and Infectious Diseases, School of Veterinary Medicine, Faculty of Health Sciences, Aristotle University of Thessaloniki, GR-54124, Thessaloniki, Greece.</nlm:affiliation><country xml:lang="fr">Grèce</country><wicri:regionArea>Laboratory of Microbiology and Infectious Diseases, School of Veterinary Medicine, Faculty of Health Sciences, Aristotle University of Thessaloniki, GR-54124, Thessaloniki</wicri:regionArea><wicri:noRegion>Thessaloniki</wicri:noRegion></affiliation></author><author><name sortKey="Laroucau, K" sort="Laroucau, K" uniqKey="Laroucau K" first="K" last="Laroucau">K. Laroucau</name><affiliation wicri:level="1"><nlm:affiliation>Anses, Animal Health Laboratory, Bacterial Zoonoses Unit, University Paris-Est, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Anses, Animal Health Laboratory, Bacterial Zoonoses Unit, University Paris-Est, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort</wicri:regionArea><wicri:noRegion>94701, Maisons-Alfort</wicri:noRegion><wicri:noRegion>94701, Maisons-Alfort</wicri:noRegion></affiliation></author><author><name sortKey="Sachse, K" sort="Sachse, K" uniqKey="Sachse K" first="K" last="Sachse">K. Sachse</name><affiliation wicri:level="1"><nlm:affiliation>Friedrich-Loeffler-Institute (Federal Research Institute for Animal Health), Institute of Molecular Pathogenesis, Naumburger Str. 96a, 07743, Jena, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Friedrich-Loeffler-Institute (Federal Research Institute for Animal Health), Institute of Molecular Pathogenesis, Naumburger Str. 96a, 07743, Jena</wicri:regionArea><wicri:noRegion>07743, Jena</wicri:noRegion><wicri:noRegion>07743, Jena</wicri:noRegion><wicri:noRegion>Jena</wicri:noRegion></affiliation></author><author><name sortKey="Longbottom, D" sort="Longbottom, D" uniqKey="Longbottom D" first="D" last="Longbottom">D. Longbottom</name><affiliation wicri:level="1"><nlm:affiliation>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ</wicri:regionArea><wicri:noRegion>EH26 0PZ</wicri:noRegion></affiliation></author><author><name sortKey="Thomson, N R" sort="Thomson, N R" uniqKey="Thomson N" first="N R" last="Thomson">N R Thomson</name><affiliation wicri:level="1"><nlm:affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK. nrt@sanger.ac.uk.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA</wicri:regionArea><wicri:noRegion>CB10 1SA</wicri:noRegion></affiliation></author></analytic><series><title level="j">BMC genomics</title><idno type="eISSN">1471-2164</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Chlamydia (genetics)</term><term>Chlamydia Infections (microbiology)</term><term>Chlamydia Infections (veterinary)</term><term>Europe</term><term>Genetic Variation</term><term>Genome, Bacterial</term><term>Genomic Instability</term><term>High-Throughput Nucleotide Sequencing</term><term>Molecular Sequence Annotation</term><term>Phylogeography</term><term>Polymorphism, Single Nucleotide</term><term>Recombination, Genetic</term><term>Sequence Analysis, DNA</term><term>Sheep</term><term>Sheep Diseases (microbiology)</term><term>Sheep, Domestic (microbiology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Analyse de séquence d'ADN</term><term>Animaux</term><term>Annotation de séquence moléculaire</term><term>Chlamydia (génétique)</term><term>Europe</term><term>Génome bactérien</term><term>Infections à Chlamydia (microbiologie)</term><term>Infections à Chlamydia (médecine vétérinaire)</term><term>Instabilité du génome</term><term>Maladies des ovins (microbiologie)</term><term>Ovis</term><term>Ovis aries (microbiologie)</term><term>Phylogéographie</term><term>Polymorphisme de nucléotide simple</term><term>Recombinaison génétique</term><term>Séquençage nucléotidique à haut débit</term><term>Variation génétique</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Chlamydia</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Chlamydia</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Infections à Chlamydia</term><term>Maladies des ovins</term><term>Ovis aries</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Chlamydia Infections</term><term>Sheep Diseases</term><term>Sheep, Domestic</term></keywords><keywords scheme="MESH" qualifier="médecine vétérinaire" xml:lang="fr"><term>Infections à Chlamydia</term></keywords><keywords scheme="MESH" qualifier="veterinary" xml:lang="en"><term>Chlamydia Infections</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Europe</term><term>Genetic Variation</term><term>Genome, Bacterial</term><term>Genomic Instability</term><term>High-Throughput Nucleotide Sequencing</term><term>Molecular Sequence Annotation</term><term>Phylogeography</term><term>Polymorphism, Single Nucleotide</term><term>Recombination, Genetic</term><term>Sequence Analysis, DNA</term><term>Sheep</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term><term>Animaux</term><term>Annotation de séquence moléculaire</term><term>Europe</term><term>Génome bactérien</term><term>Instabilité du génome</term><term>Ovis</term><term>Phylogéographie</term><term>Polymorphisme de nucléotide simple</term><term>Recombinaison génétique</term><term>Séquençage nucléotidique à haut débit</term><term>Variation génétique</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Chlamydia abortus (formerly Chlamydophila abortus) is an economically important livestock pathogen, causing ovine enzootic abortion (OEA), and can also cause zoonotic infections in humans affecting pregnancy outcome. Large-scale genomic studies on other chlamydial species are giving insights into the biology of these organisms but have not yet been performed on C. abortus. Our aim was to investigate a broad collection of European isolates of C. abortus, using next generation sequencing methods, looking at diversity, geographic distribution and genome dynamics.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">28472926</PMID><DateCreated><Year>2017</Year><Month>05</Month><Day>05</Day></DateCreated><DateCompleted><Year>2017</Year><Month>09</Month><Day>22</Day></DateCompleted><DateRevised><Year>2017</Year><Month>09</Month><Day>22</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1471-2164</ISSN><JournalIssue CitedMedium="Internet"><Volume>18</Volume><Issue>1</Issue><PubDate><Year>2017</Year><Month>May</Month><Day>04</Day></PubDate></JournalIssue><Title>BMC genomics</Title><ISOAbbreviation>BMC Genomics</ISOAbbreviation></Journal><ArticleTitle>European Chlamydia abortus livestock isolate genomes reveal unusual stability and limited diversity, reflected in geographical signatures.</ArticleTitle><Pagination><MedlinePgn>344</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1186/s12864-017-3657-y</ELocationID><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Chlamydia abortus (formerly Chlamydophila abortus) is an economically important livestock pathogen, causing ovine enzootic abortion (OEA), and can also cause zoonotic infections in humans affecting pregnancy outcome. Large-scale genomic studies on other chlamydial species are giving insights into the biology of these organisms but have not yet been performed on C. abortus. Our aim was to investigate a broad collection of European isolates of C. abortus, using next generation sequencing methods, looking at diversity, geographic distribution and genome dynamics.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">Whole genome sequencing was performed on our collection of 57 C. abortus isolates originating primarily from the UK, Germany, France and Greece, but also from Tunisia, Namibia and the USA. Phylogenetic analysis of a total of 64 genomes shows a deep structural division within the C. abortus species with a major clade displaying limited diversity, in addition to a branch carrying two more distantly related Greek isolates, LLG and POS. Within the major clade, seven further phylogenetic groups can be identified, demonstrating geographical associations. The number of variable nucleotide positions across the sampled isolates is significantly lower than those published for C. trachomatis and C. psittaci. No recombination was identified within C. abortus, and no plasmid was found. Analysis of pseudogenes showed lineage specific loss of some functions, notably with several Pmp and TMH/Inc proteins predicted to be inactivated in many of the isolates studied.</AbstractText><AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">The diversity within C. abortus appears to be much lower compared to other species within the genus. There are strong geographical signatures within the phylogeny, indicating clonal expansion within areas of limited livestock transport. No recombination has been identified within this species, showing that different species of Chlamydia may demonstrate different evolutionary dynamics, and that the genome of C. abortus is highly stable.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Seth-Smith</LastName><ForeName>H M B</ForeName><Initials>HMB</Initials><AffiliationInfo><Affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Current Address: Universitätsspital Basel, 4031, Basel, Switzerland.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Current Address: Applied Microbiology Research, Department of Biomedicine, University of Basel, 4031, Basel, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Busó</LastName><ForeName>Leonor Sánchez</ForeName><Initials>LS</Initials><AffiliationInfo><Affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Livingstone</LastName><ForeName>M</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sait</LastName><ForeName>M</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ, UK.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Current Address: Microbiological Diagnostic Unit, Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Parkville, VIC, 3010, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Harris</LastName><ForeName>S R</ForeName><Initials>SR</Initials><AffiliationInfo><Affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Aitchison</LastName><ForeName>K D</ForeName><Initials>KD</Initials><AffiliationInfo><Affiliation>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Vretou</LastName><ForeName>Evangelia</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Retired: Formerly Laboratory of Biotechnology, Department of Microbiology, Hellenic Pasteur Institute, Athens, 115 21, Greece.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Siarkou</LastName><ForeName>V I</ForeName><Initials>VI</Initials><AffiliationInfo><Affiliation>Laboratory of Microbiology and Infectious Diseases, School of Veterinary Medicine, Faculty of Health Sciences, Aristotle University of Thessaloniki, GR-54124, Thessaloniki, Greece.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Laroucau</LastName><ForeName>K</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Anses, Animal Health Laboratory, Bacterial Zoonoses Unit, University Paris-Est, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sachse</LastName><ForeName>K</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Friedrich-Loeffler-Institute (Federal Research Institute for Animal Health), Institute of Molecular Pathogenesis, Naumburger Str. 96a, 07743, Jena, Germany.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Current Address: RNA Bioinformatics and High-Throughput Analysis, Faculty of Mathematics and Computer Science, Friedrich-Schiller-Universität, Leutragraben 1, 07743, Jena, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Longbottom</LastName><ForeName>D</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Moredun Research Institute, Pentlands Science Park, Bush Loan, Edinburgh, Midlothian, EH26 0PZ, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Thomson</LastName><ForeName>N R</ForeName><Initials>NR</Initials><AffiliationInfo><Affiliation>Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK. nrt@sanger.ac.uk.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><Agency>Wellcome Trust</Agency><Country>United Kingdom</Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>05</Month><Day>04</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>BMC Genomics</MedlineTA><NlmUniqueID>100965258</NlmUniqueID><ISSNLinking>1471-2164</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2006 Nov 1;22(21):2688-90</RefSource><PMID Version="1">16928733</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Biol Evol. 1998 May;15(5):590-9</RefSource><PMID Version="1">9580989</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2008 Jun 1;24(11):1403-5</RefSource><PMID Version="1">18397895</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>BMC Microbiol. 2008 Feb 28;8:42</RefSource><PMID Version="1">18307777</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nat Genet. 1999 Apr;21(4):385-9</RefSource><PMID Version="1">10192388</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS One. 2012;7(4):e35097</RefSource><PMID Version="1">22506068</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS One. 2010 Dec 02;5(12):e14179</RefSource><PMID Version="1">21152037</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Genome Biol Evol. 2015 Oct 27;7(11):3070-84</RefSource><PMID Version="1">26507799</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Clin Microbiol. 2015 Jul;53(7):2172-9</RefSource><PMID Version="1">25926497</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Infect Immun. 2001 Jan;69(1):607-12</RefSource><PMID Version="1">11119563</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Vet Microbiol. 2009 Jun 12;137(3-4):335-44</RefSource><PMID Version="1">19217221</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Antimicrob Agents Chemother. 1998 Oct;42(10):2474-81</RefSource><PMID Version="1">9756744</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Microb Genom. 2016 Aug 25;2(8):e000083</RefSource><PMID Version="1">28348874</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Methods Ecol Evol. 2016 Jan;7(1):80-89</RefSource><PMID Version="1">27110344</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Infect Chemother. 2004 Oct;10(5):262-7</RefSource><PMID Version="1">16163459</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2000 Mar 15;28(6):1397-406</RefSource><PMID Version="1">10684935</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nat Genet. 2012 Mar 11;44(4):413-9, S1</RefSource><PMID Version="1">22406642</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2010 Feb 1;26(3):419-20</RefSource><PMID Version="1">20080509</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Vet Microbiol. 2002 Mar 1;85(2):145-57</RefSource><PMID Version="1">11844621</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Genome Announc. 2013 Jan;1(1):null</RefSource><PMID Version="1">23405306</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2003 Apr 15;31(8):2134-47</RefSource><PMID Version="1">12682364</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Biol Evol. 2012 Aug;29(8):1969-73</RefSource><PMID Version="1">22367748</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Science. 1998 Oct 23;282(5389):754-9</RefSource><PMID Version="1">9784136</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Biol Evol. 2012 Dec;29(12):3933-46</RefSource><PMID Version="1">22891032</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>N Z Vet J. 2015 Sep;63(5):284-7</RefSource><PMID Version="1">25695509</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2000 Jun 15;28(12):2311-4</RefSource><PMID Version="1">10871362</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS One. 2015 May 22;10(5):e0126433</RefSource><PMID Version="1">26001070</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Bacteriol. 2011 Aug;193(16):4276-7</RefSource><PMID Version="1">21685275</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Biol Evol. 2013 May;30(5):1224-8</RefSource><PMID Version="1">23408797</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Genome Res. 2005 May;15(5):629-40</RefSource><PMID Version="1">15837807</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Genetics. 2007 Mar;175(3):1251-66</RefSource><PMID Version="1">17151252</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2000 Oct;16(10):944-5</RefSource><PMID Version="1">11120685</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>MBio. 2013 Mar 26;4(2):null</RefSource><PMID Version="1">23532978</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2015 Feb 18;43(3):e15</RefSource><PMID Version="1">25414349</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Syst Appl Microbiol. 2015 Mar;38(2):99-103</RefSource><PMID Version="1">25618261</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2005 Aug 15;21(16):3422-3</RefSource><PMID Version="1">15976072</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Bacteriol. 2011 Jul;193(14):3690</RefSource><PMID Version="1">21571992</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Vet Microbiol. 1996 Aug;51(3-4):275-89</RefSource><PMID Version="1">8870190</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PeerJ. 2014 Mar 04;2:e281</RefSource><PMID Version="1">24688859</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Vaccine. 2010 Aug 9;28(35):5657-63</RefSource><PMID Version="1">20554095</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Comp Pathol. 2003 May;128(4):217-44</RefSource><PMID Version="1">12834606</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Proc Biol Sci. 2006 Nov 7;273(1602):2729-35</RefSource><PMID Version="1">17015320</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D000818" 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Sequencing</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D058977" MajorTopicYN="N">Molecular Sequence Annotation</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D058974" MajorTopicYN="N">Phylogeography</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020641" MajorTopicYN="N">Polymorphism, Single Nucleotide</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D011995" MajorTopicYN="N">Recombination, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012756" MajorTopicYN="N">Sheep</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012757" MajorTopicYN="N">Sheep Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D034561" MajorTopicYN="N">Sheep, Domestic</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Multi Locus Sequence Typing</Keyword><Keyword MajorTopicYN="N">Multi Locus Variable Number Tandem Repeat</Keyword><Keyword MajorTopicYN="N">Single nucleotide polymorphisms</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>11</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>03</Month><Day>24</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>5</Month><Day>6</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>5</Month><Day>6</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate 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Seth-Smith</name></noRegion><name sortKey="Aitchison, K D" sort="Aitchison, K D" uniqKey="Aitchison K" first="K D" last="Aitchison">K D Aitchison</name><name sortKey="Bus, Leonor Sanchez" sort="Bus, Leonor Sanchez" uniqKey="Bus L" first="Leonor Sánchez" last="Bus">Leonor Sánchez Bus</name><name sortKey="Harris, S R" sort="Harris, S R" uniqKey="Harris S" first="S R" last="Harris">S R Harris</name><name sortKey="Livingstone, M" sort="Livingstone, M" uniqKey="Livingstone M" first="M" last="Livingstone">M. Livingstone</name><name sortKey="Longbottom, D" sort="Longbottom, D" uniqKey="Longbottom D" first="D" last="Longbottom">D. Longbottom</name><name sortKey="Sait, M" sort="Sait, M" uniqKey="Sait M" first="M" last="Sait">M. Sait</name><name sortKey="Thomson, N R" sort="Thomson, N R" uniqKey="Thomson N" first="N R" last="Thomson">N R Thomson</name></country><country name="Grèce"><noRegion><name sortKey="Vretou, Evangelia" sort="Vretou, Evangelia" uniqKey="Vretou E" first="Evangelia" last="Vretou">Evangelia Vretou</name></noRegion><name sortKey="Siarkou, V I" sort="Siarkou, V I" uniqKey="Siarkou V" first="V I" last="Siarkou">V I Siarkou</name></country><country name="France"><noRegion><name sortKey="Laroucau, K" sort="Laroucau, K" uniqKey="Laroucau K" first="K" last="Laroucau">K. Laroucau</name></noRegion></country><country name="Allemagne"><noRegion><name sortKey="Sachse, K" sort="Sachse, K" uniqKey="Sachse K" first="K" last="Sachse">K. Sachse</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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