Malagasy Genetic Ancestry Comes from an Historical Malay Trading Post in Southeast Borneo
Identifieur interne : 002615 ( Pmc/Curation ); précédent : 002614; suivant : 002616Malagasy Genetic Ancestry Comes from an Historical Malay Trading Post in Southeast Borneo
Auteurs : Nicolas Brucato [France] ; Pradiptajati Kusuma [France, Indonésie] ; Murray P. Cox [Nouvelle-Zélande] ; Denis Pierron [France] ; Gludhug A. Purnomo [Indonésie] ; Alexander Adelaar [Australie] ; Toomas Kivisild [Royaume-Uni, Estonie] ; Thierry Letellier [France] ; Herawati Sudoyo [Indonésie] ; François-Xavier Ricaut [France]Source :
- Molecular Biology and Evolution [ 0737-4038 ] ; 2016.
Abstract
Malagasy genetic diversity results from an exceptional protoglobalization process that took place over a thousand years ago across the Indian Ocean. Previous efforts to locate the Asian origin of Malagasy highlighted Borneo broadly as a potential source, but so far no firm source populations were identified. Here, we have generated genome-wide data from two Southeast Borneo populations, the Banjar and the Ngaju, together with published data from populations across the Indian Ocean region. We find strong support for an origin of the Asian ancestry of Malagasy among the Banjar. This group emerged from the long-standing presence of a Malay Empire trading post in Southeast Borneo, which favored admixture between the Malay and an autochthonous Borneo group, the Ma’anyan. Reconciling genetic, historical, and linguistic data, we show that the Banjar, in Malay-led voyages, were the most probable Asian source among the analyzed groups in the founding of the Malagasy gene pool.
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DOI: 10.1093/molbev/msw117
PubMed: 27381999
PubMed Central: 4989113
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Purnomo</name><affiliation wicri:level="1"><nlm:aff id="msw117-aff2">Genome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta, Indonesia</nlm:aff><country xml:lang="fr">Indonésie</country><wicri:regionArea>Genome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta</wicri:regionArea></affiliation></author><author><name sortKey="Adelaar, Alexander" sort="Adelaar, Alexander" uniqKey="Adelaar A" first="Alexander" last="Adelaar">Alexander Adelaar</name><affiliation wicri:level="1"><nlm:aff id="msw117-aff4">Asia Institute, University of Melbourne, Melbourne, Australia</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Asia Institute, University of Melbourne, Melbourne</wicri:regionArea></affiliation></author><author><name sortKey="Kivisild, Toomas" sort="Kivisild, Toomas" uniqKey="Kivisild T" first="Toomas" last="Kivisild">Toomas Kivisild</name><affiliation wicri:level="1"><nlm:aff id="msw117-aff5">Department of Biological Anthropology, University of Cambridge, Cambridge, United Kingdom</nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Department of Biological Anthropology, University of Cambridge, Cambridge</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="msw117-aff6">Estonian Biocentre, Tartu, Estonia</nlm:aff><country xml:lang="fr">Estonie</country><wicri:regionArea>Estonian Biocentre, Tartu</wicri:regionArea></affiliation></author><author><name sortKey="Letellier, Thierry" sort="Letellier, Thierry" uniqKey="Letellier T" first="Thierry" last="Letellier">Thierry Letellier</name><affiliation wicri:level="1"><nlm:aff id="msw117-aff1">Evolutionary Medicine Group, Laboratoire d’Anthropologie Moléculaire et Imagerie de Synthèse UMR 5288 CNRS, Université Toulouse III, Université de Toulouse, Toulouse, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Evolutionary Medicine Group, Laboratoire d’Anthropologie Moléculaire et Imagerie de Synthèse UMR 5288 CNRS, Université Toulouse III, Université de Toulouse, Toulouse</wicri:regionArea></affiliation></author><author><name sortKey="Sudoyo, Herawati" sort="Sudoyo, Herawati" uniqKey="Sudoyo H" first="Herawati" last="Sudoyo">Herawati Sudoyo</name><affiliation wicri:level="1"><nlm:aff id="msw117-aff2">Genome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta, Indonesia</nlm:aff><country xml:lang="fr">Indonésie</country><wicri:regionArea>Genome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="msw117-aff7">Department of Medical Biology, Faculty of Medicine, University of Indonesia, Jakarta, Indonesia</nlm:aff><country xml:lang="fr">Indonésie</country><wicri:regionArea>Department of Medical Biology, Faculty of Medicine, University of Indonesia, Jakarta</wicri:regionArea></affiliation></author><author><name sortKey="Ricaut, Francois Xavier" sort="Ricaut, Francois Xavier" uniqKey="Ricaut F" first="François-Xavier" last="Ricaut">François-Xavier Ricaut</name><affiliation wicri:level="1"><nlm:aff id="msw117-aff1">Evolutionary Medicine Group, Laboratoire d’Anthropologie Moléculaire et Imagerie de Synthèse UMR 5288 CNRS, Université Toulouse III, Université de Toulouse, Toulouse, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Evolutionary Medicine Group, Laboratoire d’Anthropologie Moléculaire et Imagerie de Synthèse UMR 5288 CNRS, Université Toulouse III, Université de Toulouse, Toulouse</wicri:regionArea></affiliation></author></analytic><series><title level="j">Molecular Biology and Evolution</title><idno type="ISSN">0737-4038</idno><idno type="eISSN">1537-1719</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Malagasy genetic diversity results from an exceptional protoglobalization process that took place over a thousand years ago across the Indian Ocean. Previous efforts to locate the Asian origin of Malagasy highlighted Borneo broadly as a potential source, but so far no firm source populations were identified. Here, we have generated genome-wide data from two Southeast Borneo populations, the Banjar and the Ngaju, together with published data from populations across the Indian Ocean region. We find strong support for an origin of the Asian ancestry of Malagasy among the Banjar. This group emerged from the long-standing presence of a Malay Empire trading post in Southeast Borneo, which favored admixture between the Malay and an autochthonous Borneo group, the Ma’anyan. Reconciling genetic, historical, and linguistic data, we show that the Banjar, in Malay-led voyages, were the most probable Asian source among the analyzed groups in the founding of the Malagasy gene pool.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Adelaar, Ka" uniqKey="Adelaar K">KA. 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<front><journal-meta><journal-id journal-id-type="nlm-ta">Mol Biol Evol</journal-id><journal-id journal-id-type="iso-abbrev">Mol. Biol. Evol</journal-id><journal-id journal-id-type="publisher-id">molbev</journal-id><journal-id journal-id-type="hwp">molbiolevol</journal-id><journal-title-group><journal-title>Molecular Biology and Evolution</journal-title></journal-title-group><issn pub-type="ppub">0737-4038</issn><issn pub-type="epub">1537-1719</issn><publisher><publisher-name>Oxford University Press</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">27381999</article-id><article-id pub-id-type="pmc">4989113</article-id><article-id pub-id-type="doi">10.1093/molbev/msw117</article-id><article-id pub-id-type="publisher-id">msw117</article-id><article-categories><subj-group subj-group-type="heading"><subject>Discoveries</subject></subj-group></article-categories><title-group><article-title>Malagasy Genetic Ancestry Comes from an Historical Malay Trading Post in Southeast Borneo</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Brucato</surname><given-names>Nicolas</given-names></name><xref ref-type="author-notes" rid="msw117-FM2"><sup>†</sup></xref><xref ref-type="aff" rid="msw117-aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author"><name><surname>Kusuma</surname><given-names>Pradiptajati</given-names></name><xref ref-type="author-notes" rid="msw117-FM2"><sup>†</sup></xref><xref ref-type="aff" rid="msw117-aff1"><sup>1</sup></xref><xref ref-type="aff" rid="msw117-aff2"><sup>2</sup></xref></contrib><contrib contrib-type="author"><name><surname>Cox</surname><given-names>Murray P.</given-names></name><xref ref-type="aff" rid="msw117-aff3"><sup>3</sup></xref></contrib><contrib contrib-type="author"><name><surname>Pierron</surname><given-names>Denis</given-names></name><xref ref-type="aff" rid="msw117-aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author"><name><surname>Purnomo</surname><given-names>Gludhug A.</given-names></name><xref ref-type="aff" rid="msw117-aff2"><sup>2</sup></xref></contrib><contrib contrib-type="author"><name><surname>Adelaar</surname><given-names>Alexander</given-names></name><xref ref-type="aff" rid="msw117-aff4"><sup>4</sup></xref></contrib><contrib contrib-type="author"><name><surname>Kivisild</surname><given-names>Toomas</given-names></name><xref ref-type="aff" rid="msw117-aff5"><sup>5</sup></xref><xref ref-type="aff" rid="msw117-aff6"><sup>6</sup></xref></contrib><contrib contrib-type="author"><name><surname>Letellier</surname><given-names>Thierry</given-names></name><xref ref-type="aff" rid="msw117-aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author"><name><surname>Sudoyo</surname><given-names>Herawati</given-names></name><xref ref-type="aff" rid="msw117-aff2"><sup>2</sup></xref><xref ref-type="aff" rid="msw117-aff7"><sup>7</sup></xref></contrib><contrib contrib-type="author"><name><surname>Ricaut</surname><given-names>François-Xavier</given-names></name><xref ref-type="corresp" rid="msw117-cor1">*</xref><xref ref-type="aff" rid="msw117-aff1"><sup>1</sup></xref></contrib><aff id="msw117-aff1"><sup>1</sup>Evolutionary Medicine Group, Laboratoire d’Anthropologie Moléculaire et Imagerie de Synthèse UMR 5288 CNRS, Université Toulouse III, Université de Toulouse, Toulouse, France</aff><aff id="msw117-aff2"><sup>2</sup>Genome Diversity and Diseases Laboratory, Eijkman Institute for Molecular Biology, Jakarta, Indonesia</aff><aff id="msw117-aff3"><sup>3</sup>Statistics and Bioinformatics Group, Institute of Fundamental Sciences, Massey University, Palmerston North, New Zealand</aff><aff id="msw117-aff4"><sup>4</sup>Asia Institute, University of Melbourne, Melbourne, Australia</aff><aff id="msw117-aff5"><sup>5</sup>Department of Biological Anthropology, University of Cambridge, Cambridge, United Kingdom</aff><aff id="msw117-aff6"><sup>6</sup>Estonian Biocentre, Tartu, Estonia</aff><aff id="msw117-aff7"><sup>7</sup>Department of Medical Biology, Faculty of Medicine, University of Indonesia, Jakarta, Indonesia</aff></contrib-group><author-notes><fn id="msw117-FM2"><p><sup>†</sup>These authors contributed equally to this work.</p></fn><corresp id="msw117-cor1">*<bold>Corresponding author:</bold> E-mail: <email>francois-xavier.ricaut@univ-tlse3.fr</email>.</corresp><fn id="msw117-FM1"><p><bold>Associate editor</bold>: Connie Mulligan</p></fn></author-notes><pub-date pub-type="ppub"><month>9</month><year>2016</year></pub-date><pub-date pub-type="epub"><day>05</day><month>7</month><year>2016</year></pub-date><pub-date pub-type="pmc-release"><day>05</day><month>7</month><year>2016</year></pub-date><pmc-comment> PMC Release delay is 0 months and 0 days and was based on the
<volume>33</volume><issue>9</issue><fpage>2396</fpage><lpage>2400</lpage><permissions><copyright-statement>© The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.</copyright-statement><copyright-year>2016</copyright-year><license xlink:href="http://creativecommons.org/licenses/by-nc/4.0/" license-type="creative-commons"><license-p>This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by-nc/4.0/">http://creativecommons.org/licenses/by-nc/4.0/</ext-link>), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com</license-p></license></permissions><abstract><p>Malagasy genetic diversity results from an exceptional protoglobalization process that took place over a thousand years ago across the Indian Ocean. Previous efforts to locate the Asian origin of Malagasy highlighted Borneo broadly as a potential source, but so far no firm source populations were identified. Here, we have generated genome-wide data from two Southeast Borneo populations, the Banjar and the Ngaju, together with published data from populations across the Indian Ocean region. We find strong support for an origin of the Asian ancestry of Malagasy among the Banjar. This group emerged from the long-standing presence of a Malay Empire trading post in Southeast Borneo, which favored admixture between the Malay and an autochthonous Borneo group, the Ma’anyan. Reconciling genetic, historical, and linguistic data, we show that the Banjar, in Malay-led voyages, were the most probable Asian source among the analyzed groups in the founding of the Malagasy gene pool.</p></abstract><kwd-group><kwd>Madagascar</kwd><kwd>Austronesian</kwd><kwd>Borneo</kwd><kwd>Banjar</kwd><kwd>genome-wide.</kwd></kwd-group><counts><page-count count="5"></page-count></counts></article-meta></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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