YeeJ is an inverse autotransporter from Escherichia coli that binds to peptidoglycan and promotes biofilm formation
Identifieur interne : 000D00 ( Pmc/Curation ); précédent : 000C99; suivant : 000D01YeeJ is an inverse autotransporter from Escherichia coli that binds to peptidoglycan and promotes biofilm formation
Auteurs : Marta Martinez-Gil [Espagne] ; Kelvin G. K. Goh ; Elze Rackaityte [États-Unis] ; Chizuko Sakamoto ; Bianca Audrain ; Danilo G. Moriel [Italie] ; Makrina Totsika ; Jean-Marc Ghigo ; Mark A. Schembri ; Christophe BeloinSource :
- Scientific Reports [ 2045-2322 ] ; 2017.
Abstract
Url:
DOI: 10.1038/s41598-017-10902-0
PubMed: 28900103
PubMed Central: 5595812
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: Pour aller vers cette notice dans l'étape Curation :000E39
Links to Exploration step
PMC:5595812Curation
No country items
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that binds to peptidoglycan and promotes biofilm formation</title>
<author><name sortKey="Martinez Gil, Marta" sort="Martinez Gil, Marta" uniqKey="Martinez Gil M" first="Marta" last="Martinez-Gil">Marta Martinez-Gil</name>
<affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2353 6535</institution-id>
<institution-id institution-id-type="GRID">grid.428999.7</institution-id>
<institution>Institut Pasteur, Unité de Génétique des Biofilms,</institution>
</institution-wrap>
28 rue du Dr. Roux, 75724 Paris, CEDEX 15 France</nlm:aff>
<wicri:noCountry code="subfield">CEDEX 15 France</wicri:noCountry>
</affiliation>
<affiliation wicri:level="1"><nlm:aff id="Aff4"><institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2298 7828</institution-id>
<institution-id institution-id-type="GRID">grid.10215.37</institution-id>
<institution>Present Address: Departamento de Biología Celular,</institution>
<institution>Genética y Fisiología, Facultad de Ciencias. Universidad de Málaga,</institution>
</institution-wrap>
Málaga, Spain</nlm:aff>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Málaga</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Goh, Kelvin G K" sort="Goh, Kelvin G K" uniqKey="Goh K" first="Kelvin G. K." last="Goh">Kelvin G. K. Goh</name>
<affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>School of Chemistry and Molecular Biosciences, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</nlm:aff>
<wicri:noCountry code="subfield">QLD 4072 Australia</wicri:noCountry>
</affiliation>
<affiliation><nlm:aff id="Aff3"><institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>Australian Infectious Diseases Research Centre, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</nlm:aff>
<wicri:noCountry code="subfield">QLD 4072 Australia</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Rackaityte, Elze" sort="Rackaityte, Elze" uniqKey="Rackaityte E" first="Elze" last="Rackaityte">Elze Rackaityte</name>
<affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2353 6535</institution-id>
<institution-id institution-id-type="GRID">grid.428999.7</institution-id>
<institution>Institut Pasteur, Unité de Génétique des Biofilms,</institution>
</institution-wrap>
28 rue du Dr. Roux, 75724 Paris, CEDEX 15 France</nlm:aff>
<wicri:noCountry code="subfield">CEDEX 15 France</wicri:noCountry>
</affiliation>
<affiliation wicri:level="2"><nlm:aff id="Aff5"><institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2297 6811</institution-id>
<institution-id institution-id-type="GRID">grid.266102.1</institution-id>
<institution>Present Address: University of California San Francisco, Department of Medicine,</institution>
</institution-wrap>
San Francisco, CA USA</nlm:aff>
<country>États-Unis</country>
<placeName><region type="state">Californie</region>
</placeName>
<wicri:cityArea>San Francisco</wicri:cityArea>
</affiliation>
</author>
<author><name sortKey="Sakamoto, Chizuko" sort="Sakamoto, Chizuko" uniqKey="Sakamoto C" first="Chizuko" last="Sakamoto">Chizuko Sakamoto</name>
<affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2353 6535</institution-id>
<institution-id institution-id-type="GRID">grid.428999.7</institution-id>
<institution>Institut Pasteur, Unité de Génétique des Biofilms,</institution>
</institution-wrap>
28 rue du Dr. Roux, 75724 Paris, CEDEX 15 France</nlm:aff>
<wicri:noCountry code="subfield">CEDEX 15 France</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Audrain, Bianca" sort="Audrain, Bianca" uniqKey="Audrain B" first="Bianca" last="Audrain">Bianca Audrain</name>
<affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2353 6535</institution-id>
<institution-id institution-id-type="GRID">grid.428999.7</institution-id>
<institution>Institut Pasteur, Unité de Génétique des Biofilms,</institution>
</institution-wrap>
28 rue du Dr. Roux, 75724 Paris, CEDEX 15 France</nlm:aff>
<wicri:noCountry code="subfield">CEDEX 15 France</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Moriel, Danilo G" sort="Moriel, Danilo G" uniqKey="Moriel D" first="Danilo G." last="Moriel">Danilo G. Moriel</name>
<affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>School of Chemistry and Molecular Biosciences, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</nlm:aff>
<wicri:noCountry code="subfield">QLD 4072 Australia</wicri:noCountry>
</affiliation>
<affiliation><nlm:aff id="Aff3"><institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>Australian Infectious Diseases Research Centre, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</nlm:aff>
<wicri:noCountry code="subfield">QLD 4072 Australia</wicri:noCountry>
</affiliation>
<affiliation wicri:level="1"><nlm:aff id="Aff6"><institution-wrap><institution-id institution-id-type="GRID">grid.425088.3</institution-id>
<institution>Present Address: GSK Vaccines Institute for Global Health S.r.l.,</institution>
</institution-wrap>
53100 Siena, Italy</nlm:aff>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>53100 Siena</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Totsika, Makrina" sort="Totsika, Makrina" uniqKey="Totsika M" first="Makrina" last="Totsika">Makrina Totsika</name>
<affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>School of Chemistry and Molecular Biosciences, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</nlm:aff>
<wicri:noCountry code="subfield">QLD 4072 Australia</wicri:noCountry>
</affiliation>
<affiliation><nlm:aff id="Aff3"><institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>Australian Infectious Diseases Research Centre, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</nlm:aff>
<wicri:noCountry code="subfield">QLD 4072 Australia</wicri:noCountry>
</affiliation>
<affiliation><nlm:aff id="Aff7"><institution-wrap><institution-id institution-id-type="ISNI">0000000089150953</institution-id>
<institution-id institution-id-type="GRID">grid.1024.7</institution-id>
<institution>Present Address: Institute of Health and Biomedical Innovation, and School of Biomedical Sciences, Queensland University of Technology,</institution>
</institution-wrap>
Kelvin Grove, QLD 4059 Australia</nlm:aff>
<wicri:noCountry code="subfield">QLD 4059 Australia</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Ghigo, Jean Marc" sort="Ghigo, Jean Marc" uniqKey="Ghigo J" first="Jean-Marc" last="Ghigo">Jean-Marc Ghigo</name>
<affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2353 6535</institution-id>
<institution-id institution-id-type="GRID">grid.428999.7</institution-id>
<institution>Institut Pasteur, Unité de Génétique des Biofilms,</institution>
</institution-wrap>
28 rue du Dr. Roux, 75724 Paris, CEDEX 15 France</nlm:aff>
<wicri:noCountry code="subfield">CEDEX 15 France</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Schembri, Mark A" sort="Schembri, Mark A" uniqKey="Schembri M" first="Mark A." last="Schembri">Mark A. Schembri</name>
<affiliation><nlm:aff id="Aff2"><institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>School of Chemistry and Molecular Biosciences, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</nlm:aff>
<wicri:noCountry code="subfield">QLD 4072 Australia</wicri:noCountry>
</affiliation>
<affiliation><nlm:aff id="Aff3"><institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>Australian Infectious Diseases Research Centre, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</nlm:aff>
<wicri:noCountry code="subfield">QLD 4072 Australia</wicri:noCountry>
</affiliation>
</author>
<author><name sortKey="Beloin, Christophe" sort="Beloin, Christophe" uniqKey="Beloin C" first="Christophe" last="Beloin">Christophe Beloin</name>
<affiliation><nlm:aff id="Aff1"><institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2353 6535</institution-id>
<institution-id institution-id-type="GRID">grid.428999.7</institution-id>
<institution>Institut Pasteur, Unité de Génétique des Biofilms,</institution>
</institution-wrap>
28 rue du Dr. Roux, 75724 Paris, CEDEX 15 France</nlm:aff>
<wicri:noCountry code="subfield">CEDEX 15 France</wicri:noCountry>
</affiliation>
</author>
</analytic>
<series><title level="j">Scientific Reports</title>
<idno type="eISSN">2045-2322</idno>
<imprint><date when="2017">2017</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><p id="Par1"><italic>Escherichia coli</italic>
is a commensal or pathogenic bacterium that can survive in diverse environments. Adhesion to surfaces is essential for <italic>E. coli</italic>
colonization, and thus it is important to understand the molecular mechanisms that promote this process in different niches. Autotransporter proteins are a class of cell-surface factor used by <italic>E. coli</italic>
for adherence. Here we characterized the regulation and function of YeeJ, a poorly studied but widespread representative from an emerging class of autotransporter proteins, the inverse autotransporters (IAT). We showed that the <italic>yeeJ</italic>
gene is present in ~40% of 96 completely sequenced <italic>E. coli</italic>
genomes and that YeeJ exists as two length variants, albeit with no detectable functional differences. We demonstrated that YeeJ promotes biofilm formation in different settings through exposition at the cell-surface. We also showed that YeeJ contains a LysM domain that interacts with peptidoglycan and thus assists its localization into the outer membrane. Additionally, we identified the Polynucleotide Phosphorylase PNPase as a repressor of <italic>yeeJ</italic>
transcription. Overall, our work provides new insight into YeeJ as a member of the recently defined IAT class, and contributes to our understanding of how commensal and pathogenic <italic>E. coli</italic>
colonise their environments.</p>
</div>
</front>
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<pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Sci Rep</journal-id>
<journal-id journal-id-type="iso-abbrev">Sci Rep</journal-id>
<journal-title-group><journal-title>Scientific Reports</journal-title>
</journal-title-group>
<issn pub-type="epub">2045-2322</issn>
<publisher><publisher-name>Nature Publishing Group UK</publisher-name>
<publisher-loc>London</publisher-loc>
</publisher>
</journal-meta>
<article-meta><article-id pub-id-type="pmid">28900103</article-id>
<article-id pub-id-type="pmc">5595812</article-id>
<article-id pub-id-type="publisher-id">10902</article-id>
<article-id pub-id-type="doi">10.1038/s41598-017-10902-0</article-id>
<article-categories><subj-group subj-group-type="heading"><subject>Article</subject>
</subj-group>
</article-categories>
<title-group><article-title>YeeJ is an inverse autotransporter from <italic>Escherichia coli</italic>
that binds to peptidoglycan and promotes biofilm formation</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" equal-contrib="yes"><name><surname>Martinez-Gil</surname>
<given-names>Marta</given-names>
</name>
<xref ref-type="aff" rid="Aff1">1</xref>
<xref ref-type="aff" rid="Aff4">4</xref>
</contrib>
<contrib contrib-type="author" equal-contrib="yes"><name><surname>Goh</surname>
<given-names>Kelvin G. K.</given-names>
</name>
<xref ref-type="aff" rid="Aff2">2</xref>
<xref ref-type="aff" rid="Aff3">3</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Rackaityte</surname>
<given-names>Elze</given-names>
</name>
<xref ref-type="aff" rid="Aff1">1</xref>
<xref ref-type="aff" rid="Aff5">5</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Sakamoto</surname>
<given-names>Chizuko</given-names>
</name>
<xref ref-type="aff" rid="Aff1">1</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Audrain</surname>
<given-names>Bianca</given-names>
</name>
<xref ref-type="aff" rid="Aff1">1</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Moriel</surname>
<given-names>Danilo G.</given-names>
</name>
<xref ref-type="aff" rid="Aff2">2</xref>
<xref ref-type="aff" rid="Aff3">3</xref>
<xref ref-type="aff" rid="Aff6">6</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Totsika</surname>
<given-names>Makrina</given-names>
</name>
<xref ref-type="aff" rid="Aff2">2</xref>
<xref ref-type="aff" rid="Aff3">3</xref>
<xref ref-type="aff" rid="Aff7">7</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Ghigo</surname>
<given-names>Jean-Marc</given-names>
</name>
<xref ref-type="aff" rid="Aff1">1</xref>
</contrib>
<contrib contrib-type="author" corresp="yes"><name><surname>Schembri</surname>
<given-names>Mark A.</given-names>
</name>
<address><email>m.schembri@uq.edu.au</email>
</address>
<xref ref-type="aff" rid="Aff2">2</xref>
<xref ref-type="aff" rid="Aff3">3</xref>
</contrib>
<contrib contrib-type="author" corresp="yes"><name><surname>Beloin</surname>
<given-names>Christophe</given-names>
</name>
<address><email>cbeloin@pasteur.fr</email>
</address>
<xref ref-type="aff" rid="Aff1">1</xref>
</contrib>
<aff id="Aff1"><label>1</label>
<institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2353 6535</institution-id>
<institution-id institution-id-type="GRID">grid.428999.7</institution-id>
<institution>Institut Pasteur, Unité de Génétique des Biofilms,</institution>
</institution-wrap>
28 rue du Dr. Roux, 75724 Paris, CEDEX 15 France</aff>
<aff id="Aff2"><label>2</label>
<institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>School of Chemistry and Molecular Biosciences, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</aff>
<aff id="Aff3"><label>3</label>
<institution-wrap><institution-id institution-id-type="ISNI">0000 0000 9320 7537</institution-id>
<institution-id institution-id-type="GRID">grid.1003.2</institution-id>
<institution>Australian Infectious Diseases Research Centre, The University of Queensland,</institution>
</institution-wrap>
Brisbane, QLD 4072 Australia</aff>
<aff id="Aff4"><label>4</label>
<institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2298 7828</institution-id>
<institution-id institution-id-type="GRID">grid.10215.37</institution-id>
<institution>Present Address: Departamento de Biología Celular,</institution>
<institution>Genética y Fisiología, Facultad de Ciencias. Universidad de Málaga,</institution>
</institution-wrap>
Málaga, Spain</aff>
<aff id="Aff5"><label>5</label>
<institution-wrap><institution-id institution-id-type="ISNI">0000 0001 2297 6811</institution-id>
<institution-id institution-id-type="GRID">grid.266102.1</institution-id>
<institution>Present Address: University of California San Francisco, Department of Medicine,</institution>
</institution-wrap>
San Francisco, CA USA</aff>
<aff id="Aff6"><label>6</label>
<institution-wrap><institution-id institution-id-type="GRID">grid.425088.3</institution-id>
<institution>Present Address: GSK Vaccines Institute for Global Health S.r.l.,</institution>
</institution-wrap>
53100 Siena, Italy</aff>
<aff id="Aff7"><label>7</label>
<institution-wrap><institution-id institution-id-type="ISNI">0000000089150953</institution-id>
<institution-id institution-id-type="GRID">grid.1024.7</institution-id>
<institution>Present Address: Institute of Health and Biomedical Innovation, and School of Biomedical Sciences, Queensland University of Technology,</institution>
</institution-wrap>
Kelvin Grove, QLD 4059 Australia</aff>
</contrib-group>
<pub-date pub-type="epub"><day>12</day>
<month>9</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="pmc-release"><day>12</day>
<month>9</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="collection"><year>2017</year>
</pub-date>
<volume>7</volume>
<elocation-id>11326</elocation-id>
<history><date date-type="received"><day>3</day>
<month>4</month>
<year>2017</year>
</date>
<date date-type="accepted"><day>16</day>
<month>8</month>
<year>2017</year>
</date>
</history>
<permissions><copyright-statement>© The Author(s) 2017</copyright-statement>
<license license-type="OpenAccess"><license-p><bold>Open Access</bold>
This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/">http://creativecommons.org/licenses/by/4.0/</ext-link>
.</license-p>
</license>
</permissions>
<abstract id="Abs1"><p id="Par1"><italic>Escherichia coli</italic>
is a commensal or pathogenic bacterium that can survive in diverse environments. Adhesion to surfaces is essential for <italic>E. coli</italic>
colonization, and thus it is important to understand the molecular mechanisms that promote this process in different niches. Autotransporter proteins are a class of cell-surface factor used by <italic>E. coli</italic>
for adherence. Here we characterized the regulation and function of YeeJ, a poorly studied but widespread representative from an emerging class of autotransporter proteins, the inverse autotransporters (IAT). We showed that the <italic>yeeJ</italic>
gene is present in ~40% of 96 completely sequenced <italic>E. coli</italic>
genomes and that YeeJ exists as two length variants, albeit with no detectable functional differences. We demonstrated that YeeJ promotes biofilm formation in different settings through exposition at the cell-surface. We also showed that YeeJ contains a LysM domain that interacts with peptidoglycan and thus assists its localization into the outer membrane. Additionally, we identified the Polynucleotide Phosphorylase PNPase as a repressor of <italic>yeeJ</italic>
transcription. Overall, our work provides new insight into YeeJ as a member of the recently defined IAT class, and contributes to our understanding of how commensal and pathogenic <italic>E. coli</italic>
colonise their environments.</p>
</abstract>
<custom-meta-group><custom-meta><meta-name>issue-copyright-statement</meta-name>
<meta-value>© The Author(s) 2017</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
</front>
</pmc>
</record>
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