Plant Growth Modelling and Applications: The Increasing Importance of Plant Architecture in Growth Models
Identifieur interne : 001723 ( Pmc/Corpus ); précédent : 001722; suivant : 001724Plant Growth Modelling and Applications: The Increasing Importance of Plant Architecture in Growth Models
Auteurs : Thierry Fourcaud ; Xiaopeng Zhang ; Alexia Stokes ; Hans Lambers ; Christian KörnerSource :
- Annals of Botany [ 0305-7364 ] ; 2008.
Abstract
Modelling plant growth allows us to test hypotheses and carry out virtual experiments concerning plant growth processes that could otherwise take years in field conditions. The visualization of growth simulations allows us to see directly and vividly the outcome of a given model and provides us with an instructive tool useful for agronomists and foresters, as well as for teaching. Functional–structural (FS) plant growth models are nowadays particularly important for integrating biological processes with environmental conditions in 3-D virtual plants, and provide the basis for more advanced research in plant sciences.
In this viewpoint paper, we ask the following questions. Are we modelling the correct processes that drive plant growth, and is growth driven mostly by sink or source activity? In current models, is the importance of soil resources (nutrients, water, temperature and their interaction with meristematic activity) considered adequately? Do classic models account for architectural adjustment as well as integrating the fundamental principles of development? Whilst answering these questions with the available data in the literature, we put forward the opinion that plant architecture and sink activity must be pushed to the centre of plant growth models. In natural conditions, sinks will more often drive growth than source activity, because sink activity is often controlled by finite soil resources or developmental constraints.
This viewpoint paper also serves as an introduction to this Special Issue devoted to plant growth modelling, which includes new research covering areas stretching from cell growth to biomechanics. All papers were presented at the Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications (PMA06), held in Beijing, China, from 13–17 November, 2006. Although a large number of papers are devoted to FS models of agricultural and forest crop species, physiological and genetic processes have recently been included and point the way to a new direction in plant modelling research.
Url:
DOI: 10.1093/aob/mcn050
PubMed: 18387970
PubMed Central: 2710283
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last="Stokes">Alexia Stokes</name><affiliation><nlm:aff id="af3"><addr-line>INRA, UMR AMAP, TA-A51/PS2, Boulevard de la Lironde, 34398 Montpellier Cedex 5</addr-line>,<country>France</country></nlm:aff></affiliation></author><author><name sortKey="Lambers, Hans" sort="Lambers, Hans" uniqKey="Lambers H" first="Hans" last="Lambers">Hans Lambers</name><affiliation><nlm:aff id="af4"><addr-line>School of Plant Biology, Faculty of Natural and Agricultural Sciences</addr-line>,<institution>The University of Western Australia (CRICOS Provider No. 00126G)</institution>,<addr-line>Crawley WA 6009</addr-line>,<country>Australia</country></nlm:aff></affiliation></author><author><name sortKey="Korner, Christian" sort="Korner, Christian" uniqKey="Korner C" first="Christian" last="Körner">Christian Körner</name><affiliation><nlm:aff id="af5"><institution>Institute of Botany, University of Basel</institution>,<addr-line>Schoenbeinstr. 6, CH-4056 Basel</addr-line>,<country>Switzerland</country></nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">18387970</idno><idno type="pmc">2710283</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2710283</idno><idno type="RBID">PMC:2710283</idno><idno type="doi">10.1093/aob/mcn050</idno><date when="2008">2008</date><idno type="wicri:Area/Pmc/Corpus">001723</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001723</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Plant Growth Modelling and Applications: The Increasing Importance of Plant Architecture in Growth Models</title><author><name sortKey="Fourcaud, Thierry" sort="Fourcaud, Thierry" uniqKey="Fourcaud T" first="Thierry" last="Fourcaud">Thierry Fourcaud</name><affiliation><nlm:aff id="af1"><addr-line>CIRAD, UMR AMAP, TA-A51/PS2, Boulevard de la Lironde, 34398 Montpellier Cedex 5</addr-line>,<country>France</country></nlm:aff></affiliation></author><author><name sortKey="Zhang, Xiaopeng" sort="Zhang, Xiaopeng" uniqKey="Zhang X" first="Xiaopeng" last="Zhang">Xiaopeng Zhang</name><affiliation><nlm:aff id="af2"><addr-line>LIAMA-NLPR</addr-line>,<institution>Institute of Automation, Chinese Academy of Sciences</institution>,<addr-line>Beijing 100080</addr-line>,<country>China</country></nlm:aff></affiliation></author><author><name sortKey="Stokes, Alexia" sort="Stokes, Alexia" uniqKey="Stokes A" first="Alexia" last="Stokes">Alexia Stokes</name><affiliation><nlm:aff id="af3"><addr-line>INRA, UMR AMAP, TA-A51/PS2, Boulevard de la Lironde, 34398 Montpellier Cedex 5</addr-line>,<country>France</country></nlm:aff></affiliation></author><author><name sortKey="Lambers, Hans" sort="Lambers, Hans" uniqKey="Lambers H" first="Hans" last="Lambers">Hans Lambers</name><affiliation><nlm:aff id="af4"><addr-line>School of Plant Biology, Faculty of Natural and Agricultural Sciences</addr-line>,<institution>The University of Western Australia (CRICOS Provider No. 00126G)</institution>,<addr-line>Crawley WA 6009</addr-line>,<country>Australia</country></nlm:aff></affiliation></author><author><name sortKey="Korner, Christian" sort="Korner, Christian" uniqKey="Korner C" first="Christian" last="Körner">Christian Körner</name><affiliation><nlm:aff id="af5"><institution>Institute of Botany, University of Basel</institution>,<addr-line>Schoenbeinstr. 6, CH-4056 Basel</addr-line>,<country>Switzerland</country></nlm:aff></affiliation></author></analytic><series><title level="j">Annals of Botany</title><idno type="ISSN">0305-7364</idno><idno type="eISSN">1095-8290</idno><imprint><date when="2008">2008</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><sec><title>Background</title><p>Modelling plant growth allows us to test hypotheses and carry out virtual experiments concerning plant growth processes that could otherwise take years in field conditions. The visualization of growth simulations allows us to see directly and vividly the outcome of a given model and provides us with an instructive tool useful for agronomists and foresters, as well as for teaching. Functional–structural (FS) plant growth models are nowadays particularly important for integrating biological processes with environmental conditions in 3-D virtual plants, and provide the basis for more advanced research in plant sciences.</p></sec><sec><title>Scope</title><p>In this viewpoint paper, we ask the following questions. Are we modelling the correct processes that drive plant growth, and is growth driven mostly by sink or source activity? In current models, is the importance of soil resources (nutrients, water, temperature and their interaction with meristematic activity) considered adequately? Do classic models account for architectural adjustment as well as integrating the fundamental principles of development? Whilst answering these questions with the available data in the literature, we put forward the opinion that plant architecture and sink activity must be pushed to the centre of plant growth models. In natural conditions, sinks will more often drive growth than source activity, because sink activity is often controlled by finite soil resources or developmental constraints.</p></sec><sec><title>PMA06</title><p>This viewpoint paper also serves as an introduction to this Special Issue devoted to plant growth modelling, which includes new research covering areas stretching from cell growth to biomechanics. All papers were presented at the Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications (PMA06), held in Beijing, China, from 13–17 November, 2006. Although a large number of papers are devoted to FS models of agricultural and forest crop species, physiological and genetic processes have recently been included and point the way to a new direction in plant modelling research.</p></sec></div></front></TEI><pmc article-type="research-article"><pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Ann Bot</journal-id><journal-id journal-id-type="publisher-id">annbot</journal-id><journal-id journal-id-type="hwp">annbot</journal-id><journal-title-group><journal-title>Annals of Botany</journal-title></journal-title-group><issn pub-type="ppub">0305-7364</issn><issn pub-type="epub">1095-8290</issn><publisher><publisher-name>Oxford University Press</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">18387970</article-id><article-id pub-id-type="pmc">2710283</article-id><article-id pub-id-type="doi">10.1093/aob/mcn050</article-id><article-id pub-id-type="publisher-id">mcn050</article-id><article-categories><subj-group subj-group-type="heading"><subject>Viewpoint</subject></subj-group></article-categories><title-group><article-title>Plant Growth Modelling and Applications: The Increasing Importance of Plant Architecture in Growth Models</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Fourcaud</surname><given-names>Thierry</given-names></name><xref ref-type="aff" rid="af1">1</xref><xref ref-type="corresp" rid="cor1">*</xref></contrib><contrib contrib-type="author"><name><surname>Zhang</surname><given-names>Xiaopeng</given-names></name><xref ref-type="aff" rid="af2">2</xref></contrib><contrib contrib-type="author"><name><surname>Stokes</surname><given-names>Alexia</given-names></name><xref ref-type="aff" rid="af3">3</xref></contrib><contrib contrib-type="author"><name><surname>Lambers</surname><given-names>Hans</given-names></name><xref ref-type="aff" rid="af4">4</xref></contrib><contrib contrib-type="author"><name><surname>Körner</surname><given-names>Christian</given-names></name><xref ref-type="aff" rid="af5">5</xref></contrib></contrib-group><aff id="af1"><label>1</label><addr-line>CIRAD, UMR AMAP, TA-A51/PS2, Boulevard de la Lironde, 34398 Montpellier Cedex 5</addr-line>,<country>France</country></aff><aff id="af2"><label>2</label><addr-line>LIAMA-NLPR</addr-line>,<institution>Institute of Automation, Chinese Academy of Sciences</institution>,<addr-line>Beijing 100080</addr-line>,<country>China</country></aff><aff id="af3"><label>3</label><addr-line>INRA, UMR AMAP, TA-A51/PS2, Boulevard de la Lironde, 34398 Montpellier Cedex 5</addr-line>,<country>France</country></aff><aff id="af4"><label>4</label><addr-line>School of Plant Biology, Faculty of Natural and Agricultural Sciences</addr-line>,<institution>The University of Western Australia (CRICOS Provider No. 00126G)</institution>,<addr-line>Crawley WA 6009</addr-line>,<country>Australia</country></aff><aff id="af5"><label>5</label><institution>Institute of Botany, University of Basel</institution>,<addr-line>Schoenbeinstr. 6, CH-4056 Basel</addr-line>,<country>Switzerland</country></aff><author-notes><corresp id="cor1"><label>*</label>For correspondence. E-mail <email>thierry.fourcaud@cirad.fr</email></corresp></author-notes><pub-date pub-type="ppub"><month>5</month><year>2008</year></pub-date><pub-date pub-type="epub"><day>3</day><month>4</month><year>2008</year></pub-date><volume>101</volume><issue>8</issue><fpage>1053</fpage><lpage>1063</lpage><history><date date-type="received"><day>6</day><month>2</month><year>2008</year></date><date date-type="rev-recd"><day>29</day><month>2</month><year>2008</year></date><date date-type="accepted"><day>10</day><month>3</month><year>2008</year></date></history><permissions><copyright-statement>© The Author 2008. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org</copyright-statement></permissions><abstract><sec><title>Background</title><p>Modelling plant growth allows us to test hypotheses and carry out virtual experiments concerning plant growth processes that could otherwise take years in field conditions. The visualization of growth simulations allows us to see directly and vividly the outcome of a given model and provides us with an instructive tool useful for agronomists and foresters, as well as for teaching. Functional–structural (FS) plant growth models are nowadays particularly important for integrating biological processes with environmental conditions in 3-D virtual plants, and provide the basis for more advanced research in plant sciences.</p></sec><sec><title>Scope</title><p>In this viewpoint paper, we ask the following questions. Are we modelling the correct processes that drive plant growth, and is growth driven mostly by sink or source activity? In current models, is the importance of soil resources (nutrients, water, temperature and their interaction with meristematic activity) considered adequately? Do classic models account for architectural adjustment as well as integrating the fundamental principles of development? Whilst answering these questions with the available data in the literature, we put forward the opinion that plant architecture and sink activity must be pushed to the centre of plant growth models. In natural conditions, sinks will more often drive growth than source activity, because sink activity is often controlled by finite soil resources or developmental constraints.</p></sec><sec><title>PMA06</title><p>This viewpoint paper also serves as an introduction to this Special Issue devoted to plant growth modelling, which includes new research covering areas stretching from cell growth to biomechanics. All papers were presented at the Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications (PMA06), held in Beijing, China, from 13–17 November, 2006. Although a large number of papers are devoted to FS models of agricultural and forest crop species, physiological and genetic processes have recently been included and point the way to a new direction in plant modelling research.</p></sec></abstract><kwd-group><title>Key words</title><kwd>Biomechanics</kwd><kwd>carbon allocation</kwd><kwd>functional–structural plant models</kwd><kwd>meristem</kwd><kwd>nitrogen</kwd><kwd>phenotypic plasticity</kwd><kwd>root architecture</kwd><kwd>simulation</kwd><kwd>sink</kwd><kwd>source</kwd><kwd>PMA06</kwd></kwd-group></article-meta></front></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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