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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">The Peopling of the Pacific from a Bacterial Perspective</title><author><name sortKey="Moodley, Yoshan" sort="Moodley, Yoshan" uniqKey="Moodley Y" first="Yoshan" last="Moodley">Yoshan Moodley</name><affiliation><nlm:aff id="A1"> Max-Planck-Institut für Infektionsbiologie, Department of Molecular Biology, Charitéplatz 1, 10117 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Linz, Bodo" sort="Linz, Bodo" uniqKey="Linz B" first="Bodo" last="Linz">Bodo Linz</name><affiliation><nlm:aff id="A1"> Max-Planck-Institut für Infektionsbiologie, Department of Molecular Biology, Charitéplatz 1, 10117 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Yamaoka, Yoshio" sort="Yamaoka, Yoshio" uniqKey="Yamaoka Y" first="Yoshio" last="Yamaoka">Yoshio Yamaoka</name><affiliation><nlm:aff id="A2"> Department of Medicine-Gastroenterology, Baylor College of Medicine and Michael E. DeBakey VA Medical Center, Houston, TX 77030, USA</nlm:aff></affiliation></author><author><name sortKey="Windsor, Helen M" sort="Windsor, Helen M" uniqKey="Windsor H" first="Helen M." last="Windsor">Helen M. Windsor</name><affiliation><nlm:aff id="A3"> Microbiology and Immunology M502, School of Biomedical, Biomolecular and Chemical Sciences, University of Western Australia, Australia 6009</nlm:aff></affiliation></author><author><name sortKey="Breurec, Sebastien" sort="Breurec, Sebastien" uniqKey="Breurec S" first="Sebastien" last="Breurec">Sebastien Breurec</name><affiliation><nlm:aff id="A4"> Institut Pasteur, BP 220, Dakar, Sénégal</nlm:aff></affiliation><affiliation><nlm:aff id="A5"> Institut Pasteur de Nouvelle-Calédonie, BP61, 98845 Noumea, New Caledonia</nlm:aff></affiliation></author><author><name sortKey="Wu, Jeng Yih" sort="Wu, Jeng Yih" uniqKey="Wu J" first="Jeng-Yih" last="Wu">Jeng-Yih Wu</name><affiliation><nlm:aff id="A6"> Department of Gastroenterology, Kaohsiung Medical University, 100 Shih-Chuan 1st Road, Kaohsiung 80708, Taiwan</nlm:aff></affiliation></author><author><name sortKey="Maady, Ayas" sort="Maady, Ayas" uniqKey="Maady A" first="Ayas" last="Maady">Ayas Maady</name><affiliation><nlm:aff id="A7"> Department of Endoscopy, Republic Hospital No. 1, Kyzyl City 667003, Republic of Tuva, Russia</nlm:aff></affiliation></author><author><name sortKey="Bernhoft, Steffie" sort="Bernhoft, Steffie" uniqKey="Bernhoft S" first="Steffie" last="Bernhöft">Steffie Bernhöft</name><affiliation><nlm:aff id="A1"> Max-Planck-Institut für Infektionsbiologie, Department of Molecular Biology, Charitéplatz 1, 10117 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Thiberge, Jean Michel" sort="Thiberge, Jean Michel" uniqKey="Thiberge J" first="Jean-Michel" last="Thiberge">Jean-Michel Thiberge</name><affiliation><nlm:aff id="A8"> Institut Pasteur, Genotyping of Pathogens and Public Health, 28 rue du Dr Roux, 75724 Paris, France</nlm:aff></affiliation></author><author><name sortKey="Phuanukoonnon, Suparat" sort="Phuanukoonnon, Suparat" uniqKey="Phuanukoonnon S" first="Suparat" last="Phuanukoonnon">Suparat Phuanukoonnon</name><affiliation><nlm:aff id="A9"> Papua New Guinea Institute of Medical Research, Post Office Box 60, Goroka, EHP, 441 Papua New Guinea</nlm:aff></affiliation></author><author><name sortKey="Jobb, Gangolf" sort="Jobb, Gangolf" uniqKey="Jobb G" first="Gangolf" last="Jobb">Gangolf Jobb</name><affiliation><nlm:aff id="A10"> Fritz-Kortner-Bogen 36, 81739 Munich, Germany</nlm:aff></affiliation></author><author><name sortKey="Siba, Peter" sort="Siba, Peter" uniqKey="Siba P" first="Peter" last="Siba">Peter Siba</name><affiliation><nlm:aff id="A9"> Papua New Guinea Institute of Medical Research, Post Office Box 60, Goroka, EHP, 441 Papua New Guinea</nlm:aff></affiliation></author><author><name sortKey="Graham, David Y" sort="Graham, David Y" uniqKey="Graham D" first="David Y." last="Graham">David Y. Graham</name><affiliation><nlm:aff id="A2"> Department of Medicine-Gastroenterology, Baylor College of Medicine and Michael E. DeBakey VA Medical Center, Houston, TX 77030, USA</nlm:aff></affiliation></author><author><name sortKey="Marshall, Barry J" sort="Marshall, Barry J" uniqKey="Marshall B" first="Barry J." last="Marshall">Barry J. Marshall</name><affiliation><nlm:aff id="A3"> Microbiology and Immunology M502, School of Biomedical, Biomolecular and Chemical Sciences, University of Western Australia, Australia 6009</nlm:aff></affiliation></author><author><name sortKey="Achtman, Mark" sort="Achtman, Mark" uniqKey="Achtman M" first="Mark" last="Achtman">Mark Achtman</name><affiliation><nlm:aff id="A1"> Max-Planck-Institut für Infektionsbiologie, Department of Molecular Biology, Charitéplatz 1, 10117 Berlin, Germany</nlm:aff></affiliation><affiliation><nlm:aff id="A11"> Environmental Research Institute and Department of Microbiology, University College Cork, Cork, Ireland</nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">19164753</idno><idno type="pmc">2827536</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2827536</idno><idno type="RBID">PMC:2827536</idno><idno type="doi">10.1126/science.1166083</idno><date when="2009">2009</date><idno type="wicri:Area/Pmc/Corpus">001412</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001412</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">The Peopling of the Pacific from a Bacterial Perspective</title><author><name sortKey="Moodley, Yoshan" sort="Moodley, Yoshan" uniqKey="Moodley Y" first="Yoshan" last="Moodley">Yoshan Moodley</name><affiliation><nlm:aff id="A1"> Max-Planck-Institut für Infektionsbiologie, Department of Molecular Biology, Charitéplatz 1, 10117 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Linz, Bodo" sort="Linz, Bodo" uniqKey="Linz B" first="Bodo" last="Linz">Bodo Linz</name><affiliation><nlm:aff id="A1"> Max-Planck-Institut für Infektionsbiologie, Department of Molecular Biology, Charitéplatz 1, 10117 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Yamaoka, Yoshio" sort="Yamaoka, Yoshio" uniqKey="Yamaoka Y" first="Yoshio" last="Yamaoka">Yoshio Yamaoka</name><affiliation><nlm:aff id="A2"> Department of Medicine-Gastroenterology, Baylor College of Medicine and Michael E. DeBakey VA Medical Center, Houston, TX 77030, USA</nlm:aff></affiliation></author><author><name sortKey="Windsor, Helen M" sort="Windsor, Helen M" uniqKey="Windsor H" first="Helen M." last="Windsor">Helen M. Windsor</name><affiliation><nlm:aff id="A3"> Microbiology and Immunology M502, School of Biomedical, Biomolecular and Chemical Sciences, University of Western Australia, Australia 6009</nlm:aff></affiliation></author><author><name sortKey="Breurec, Sebastien" sort="Breurec, Sebastien" uniqKey="Breurec S" first="Sebastien" last="Breurec">Sebastien Breurec</name><affiliation><nlm:aff id="A4"> Institut Pasteur, BP 220, Dakar, Sénégal</nlm:aff></affiliation><affiliation><nlm:aff id="A5"> Institut Pasteur de Nouvelle-Calédonie, BP61, 98845 Noumea, New Caledonia</nlm:aff></affiliation></author><author><name sortKey="Wu, Jeng Yih" sort="Wu, Jeng Yih" uniqKey="Wu J" first="Jeng-Yih" last="Wu">Jeng-Yih Wu</name><affiliation><nlm:aff id="A6"> Department of Gastroenterology, Kaohsiung Medical University, 100 Shih-Chuan 1st Road, Kaohsiung 80708, Taiwan</nlm:aff></affiliation></author><author><name sortKey="Maady, Ayas" sort="Maady, Ayas" uniqKey="Maady A" first="Ayas" last="Maady">Ayas Maady</name><affiliation><nlm:aff id="A7"> Department of Endoscopy, Republic Hospital No. 1, Kyzyl City 667003, Republic of Tuva, Russia</nlm:aff></affiliation></author><author><name sortKey="Bernhoft, Steffie" sort="Bernhoft, Steffie" uniqKey="Bernhoft S" first="Steffie" last="Bernhöft">Steffie Bernhöft</name><affiliation><nlm:aff id="A1"> Max-Planck-Institut für Infektionsbiologie, Department of Molecular Biology, Charitéplatz 1, 10117 Berlin, Germany</nlm:aff></affiliation></author><author><name sortKey="Thiberge, Jean Michel" sort="Thiberge, Jean Michel" uniqKey="Thiberge J" first="Jean-Michel" last="Thiberge">Jean-Michel Thiberge</name><affiliation><nlm:aff id="A8"> Institut Pasteur, Genotyping of Pathogens and Public Health, 28 rue du Dr Roux, 75724 Paris, France</nlm:aff></affiliation></author><author><name sortKey="Phuanukoonnon, Suparat" sort="Phuanukoonnon, Suparat" uniqKey="Phuanukoonnon S" first="Suparat" last="Phuanukoonnon">Suparat Phuanukoonnon</name><affiliation><nlm:aff id="A9"> Papua New Guinea Institute of Medical Research, Post Office Box 60, Goroka, EHP, 441 Papua New Guinea</nlm:aff></affiliation></author><author><name sortKey="Jobb, Gangolf" sort="Jobb, Gangolf" uniqKey="Jobb G" first="Gangolf" last="Jobb">Gangolf Jobb</name><affiliation><nlm:aff id="A10"> Fritz-Kortner-Bogen 36, 81739 Munich, Germany</nlm:aff></affiliation></author><author><name sortKey="Siba, Peter" sort="Siba, Peter" uniqKey="Siba P" first="Peter" last="Siba">Peter Siba</name><affiliation><nlm:aff id="A9"> Papua New Guinea Institute of Medical Research, Post Office Box 60, Goroka, EHP, 441 Papua New Guinea</nlm:aff></affiliation></author><author><name sortKey="Graham, David Y" sort="Graham, David Y" uniqKey="Graham D" first="David Y." last="Graham">David Y. Graham</name><affiliation><nlm:aff id="A2"> Department of Medicine-Gastroenterology, Baylor College of Medicine and Michael E. DeBakey VA Medical Center, Houston, TX 77030, USA</nlm:aff></affiliation></author><author><name sortKey="Marshall, Barry J" sort="Marshall, Barry J" uniqKey="Marshall B" first="Barry J." last="Marshall">Barry J. Marshall</name><affiliation><nlm:aff id="A3"> Microbiology and Immunology M502, School of Biomedical, Biomolecular and Chemical Sciences, University of Western Australia, Australia 6009</nlm:aff></affiliation></author><author><name sortKey="Achtman, Mark" sort="Achtman, Mark" uniqKey="Achtman M" first="Mark" last="Achtman">Mark Achtman</name><affiliation><nlm:aff id="A1"> Max-Planck-Institut für Infektionsbiologie, Department of Molecular Biology, Charitéplatz 1, 10117 Berlin, Germany</nlm:aff></affiliation><affiliation><nlm:aff id="A11"> Environmental Research Institute and Department of Microbiology, University College Cork, Cork, Ireland</nlm:aff></affiliation></author></analytic><series><title level="j">Science (New York, N.Y.)</title><idno type="ISSN">0036-8075</idno><idno type="eISSN">1095-9203</idno><imprint><date when="2009">2009</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p id="P1">Two prehistoric migrations peopled the Pacific. One reached New Guinea and Australia, and a second, more recent, migration extended through Melanesia and from there to the Polynesian islands. These migrations were accompanied by two distinct populations of the specific human pathogen <italic>Helicobacter pylori</italic>, called hpSahul and hspMaori, respectively. hpSahul split from Asian populations of <italic>H. pylori</italic> 31,000 to 37,000 years ago, in concordance with archaeological history. The hpSahul populations in New Guinea and Australia have diverged sufficiently to indicate that they have remained isolated for the past 23,000 to 32,000 years. The second human expansion from Taiwan 5000 years ago dispersed one of several subgroups of the Austronesian language family along with one of several hspMaori clades into Melanesia and Polynesia, where both language and parasite have continued to diverge.</p></div></front></TEI><pmc article-type="research-article" xml:lang="EN"><pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<pmc-dir>properties manuscript</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-journal-id">0404511</journal-id><journal-id journal-id-type="pubmed-jr-id">7473</journal-id><journal-id journal-id-type="nlm-ta">Science</journal-id><journal-title>Science (New York, N.Y.)</journal-title><issn pub-type="ppub">0036-8075</issn><issn pub-type="epub">1095-9203</issn></journal-meta><article-meta><article-id pub-id-type="pmid">19164753</article-id><article-id pub-id-type="pmc">2827536</article-id><article-id pub-id-type="doi">10.1126/science.1166083</article-id><article-id pub-id-type="manuscript">NIHMS178138</article-id><article-categories><subj-group subj-group-type="heading"><subject>Article</subject></subj-group></article-categories><title-group><article-title>The Peopling of the Pacific from a Bacterial Perspective</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Moodley</surname><given-names>Yoshan</given-names></name><xref rid="A1" ref-type="aff">1</xref><xref rid="FN2" ref-type="author-notes">*</xref><xref rid="FN3" ref-type="author-notes">†</xref></contrib><contrib contrib-type="author"><name><surname>Linz</surname><given-names>Bodo</given-names></name><xref rid="A1" ref-type="aff">1</xref><xref rid="FN2" ref-type="author-notes">*</xref><xref rid="FN4" ref-type="author-notes">‡</xref></contrib><contrib contrib-type="author"><name><surname>Yamaoka</surname><given-names>Yoshio</given-names></name><xref rid="A2" ref-type="aff">2</xref><xref rid="FN2" ref-type="author-notes">*</xref></contrib><contrib contrib-type="author"><name><surname>Windsor</surname><given-names>Helen M.</given-names></name><xref rid="A3" ref-type="aff">3</xref></contrib><contrib contrib-type="author"><name><surname>Breurec</surname><given-names>Sebastien</given-names></name><xref rid="A4" ref-type="aff">4</xref><xref rid="A5" ref-type="aff">5</xref></contrib><contrib contrib-type="author"><name><surname>Wu</surname><given-names>Jeng-Yih</given-names></name><xref rid="A6" ref-type="aff">6</xref></contrib><contrib contrib-type="author"><name><surname>Maady</surname><given-names>Ayas</given-names></name><xref rid="A7" ref-type="aff">7</xref></contrib><contrib contrib-type="author"><name><surname>Bernhöft</surname><given-names>Steffie</given-names></name><xref rid="A1" ref-type="aff">1</xref></contrib><contrib contrib-type="author"><name><surname>Thiberge</surname><given-names>Jean-Michel</given-names></name><xref rid="A8" ref-type="aff">8</xref></contrib><contrib contrib-type="author"><name><surname>Phuanukoonnon</surname><given-names>Suparat</given-names></name><xref rid="A9" ref-type="aff">9</xref></contrib><contrib contrib-type="author"><name><surname>Jobb</surname><given-names>Gangolf</given-names></name><xref rid="A10" ref-type="aff">10</xref></contrib><contrib contrib-type="author"><name><surname>Siba</surname><given-names>Peter</given-names></name><xref rid="A9" ref-type="aff">9</xref></contrib><contrib contrib-type="author"><name><surname>Graham</surname><given-names>David Y.</given-names></name><xref rid="A2" ref-type="aff">2</xref></contrib><contrib contrib-type="author"><name><surname>Marshall</surname><given-names>Barry J.</given-names></name><xref rid="A3" ref-type="aff">3</xref></contrib><contrib contrib-type="author"><name><surname>Achtman</surname><given-names>Mark</given-names></name><xref rid="A1" ref-type="aff">1</xref><xref rid="A11" ref-type="aff">11</xref><xref rid="FN1" ref-type="author-notes">§</xref></contrib></contrib-group><aff id="A1"><label>1</label> Max-Planck-Institut für Infektionsbiologie, Department of Molecular Biology, Charitéplatz 1, 10117 Berlin, Germany</aff><aff id="A2"><label>2</label> Department of Medicine-Gastroenterology, Baylor College of Medicine and Michael E. DeBakey VA Medical Center, Houston, TX 77030, USA</aff><aff id="A3"><label>3</label> Microbiology and Immunology M502, School of Biomedical, Biomolecular and Chemical Sciences, University of Western Australia, Australia 6009</aff><aff id="A4"><label>4</label> Institut Pasteur, BP 220, Dakar, Sénégal</aff><aff id="A5"><label>5</label> Institut Pasteur de Nouvelle-Calédonie, BP61, 98845 Noumea, New Caledonia</aff><aff id="A6"><label>6</label> Department of Gastroenterology, Kaohsiung Medical University, 100 Shih-Chuan 1st Road, Kaohsiung 80708, Taiwan</aff><aff id="A7"><label>7</label> Department of Endoscopy, Republic Hospital No. 1, Kyzyl City 667003, Republic of Tuva, Russia</aff><aff id="A8"><label>8</label> Institut Pasteur, Genotyping of Pathogens and Public Health, 28 rue du Dr Roux, 75724 Paris, France</aff><aff id="A9"><label>9</label> Papua New Guinea Institute of Medical Research, Post Office Box 60, Goroka, EHP, 441 Papua New Guinea</aff><aff id="A10"><label>10</label> Fritz-Kortner-Bogen 36, 81739 Munich, Germany</aff><aff id="A11"><label>11</label> Environmental Research Institute and Department of Microbiology, University College Cork, Cork, Ireland</aff><author-notes><corresp id="FN1"><label>§</label>To whom correspondence should be addressed. <email>m.achtman@ucc.ie</email></corresp><fn id="FN2" fn-type="equal"><label>*</label><p>These authors contributed equally to this work.</p></fn><fn id="FN3" fn-type="present-address"><label>†</label><p>Present address: Austrian Academy of Sciences, Konrad Lorenz Institute for Ethology, Savoyenstrasse 1A, A-1160, Vienna, Austria.</p></fn><fn id="FN4" fn-type="present-address"><label>‡</label><p>Present address: Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, USA.</p></fn></author-notes><pub-date pub-type="nihms-submitted"><day>16</day><month>2</month><year>2010</year></pub-date><pub-date pub-type="ppub"><day>23</day><month>1</month><year>2009</year></pub-date><pub-date pub-type="pmc-release"><day>23</day><month>2</month><year>2010</year></pub-date><volume>323</volume><issue>5913</issue><fpage>527</fpage><lpage>530</lpage><related-article journal-id-type="nlm-ta" journal-id="Science" related-article-type="commentary" page="467" id="N0x20c5420N0x2b8dd70" xlink:href="19164735" ext-link-type="pubmed" vol="323"></related-article><abstract><p id="P1">Two prehistoric migrations peopled the Pacific. One reached New Guinea and Australia, and a second, more recent, migration extended through Melanesia and from there to the Polynesian islands. These migrations were accompanied by two distinct populations of the specific human pathogen <italic>Helicobacter pylori</italic>, called hpSahul and hspMaori, respectively. hpSahul split from Asian populations of <italic>H. pylori</italic> 31,000 to 37,000 years ago, in concordance with archaeological history. The hpSahul populations in New Guinea and Australia have diverged sufficiently to indicate that they have remained isolated for the past 23,000 to 32,000 years. The second human expansion from Taiwan 5000 years ago dispersed one of several subgroups of the Austronesian language family along with one of several hspMaori clades into Melanesia and Polynesia, where both language and parasite have continued to diverge.</p></abstract><contract-num rid="DK1">R01 DK062813-05
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