Integrating cereal genomics to support innovation in the Triticeae
Identifieur interne : 000E88 ( Pmc/Corpus ); précédent : 000E87; suivant : 000E89Integrating cereal genomics to support innovation in the Triticeae
Auteurs : C. Feuillet ; N. Stein ; L. Rossini ; S. Praud ; K. Mayer ; A. Schulman ; K. Eversole ; R. AppelsSource :
- Functional & Integrative Genomics [ 1438-793X ] ; 2012.
Abstract
The genomic resources of small grain cereals that include some of the most important crop species such as wheat, barley, and rye are attaining a level of completion that now is contributing to new structural and functional studies as well as refining molecular marker development and mapping strategies for increasing the efficiency of breeding processes. The integration of new efforts to obtain reference sequences in bread wheat and barley, in particular, is accelerating the acquisition and interpretation of genome-level analyses in both of these major crops.
Url:
DOI: 10.1007/s10142-012-0300-5
PubMed: 23161406
PubMed Central: 3508266
Links to Exploration step
PMC:3508266Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Integrating cereal genomics to support innovation in the Triticeae</title><author><name sortKey="Feuillet, C" sort="Feuillet, C" uniqKey="Feuillet C" first="C." last="Feuillet">C. Feuillet</name><affiliation><nlm:aff id="Aff1">INRA-UBP UMR 1095 Genetics and Diversity of Cereals, Clermont-Ferrand, France</nlm:aff></affiliation></author><author><name sortKey="Stein, N" sort="Stein, N" uniqKey="Stein N" first="N." last="Stein">N. Stein</name><affiliation><nlm:aff id="Aff2">Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany</nlm:aff></affiliation></author><author><name sortKey="Rossini, L" sort="Rossini, L" uniqKey="Rossini L" first="L." last="Rossini">L. Rossini</name><affiliation><nlm:aff id="Aff3">Dipartimento di Produzione Vegetale, Università degli Studi di Milano, Milan, Italy</nlm:aff></affiliation></author><author><name sortKey="Praud, S" sort="Praud, S" uniqKey="Praud S" first="S." last="Praud">S. Praud</name><affiliation><nlm:aff id="Aff4">Biogemma, Site de la Garenne, 90126 Chappes, France</nlm:aff></affiliation></author><author><name sortKey="Mayer, K" sort="Mayer, K" uniqKey="Mayer K" first="K." last="Mayer">K. Mayer</name><affiliation><nlm:aff id="Aff5">Munich Information Center for Protein Sequences/Institute for Bioinformatics and Systems Biology, Helmholtz Center Munich, Neuherberg, Germany</nlm:aff></affiliation></author><author><name sortKey="Schulman, A" sort="Schulman, A" uniqKey="Schulman A" first="A." last="Schulman">A. Schulman</name><affiliation><nlm:aff id="Aff6">MTT/BI Institute of Biotechnology, University of Helsinki, Helsinki, Finland</nlm:aff></affiliation><affiliation><nlm:aff id="Aff7">Plant Genomics Laboratory, MTT Agrifood Research, Jokioinen, Finland</nlm:aff></affiliation></author><author><name sortKey="Eversole, K" sort="Eversole, K" uniqKey="Eversole K" first="K." last="Eversole">K. Eversole</name><affiliation><nlm:aff id="Aff8">Eversole Associates, Wyoming Road, 5207 Bethesda, USA</nlm:aff></affiliation></author><author><name sortKey="Appels, R" sort="Appels, R" uniqKey="Appels R" first="R." last="Appels">R. Appels</name><affiliation><nlm:aff id="Aff9">Center for Comparative Genomics, Murdoch University, Perth, WA 6150 Australia</nlm:aff></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">23161406</idno><idno type="pmc">3508266</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3508266</idno><idno type="RBID">PMC:3508266</idno><idno type="doi">10.1007/s10142-012-0300-5</idno><date when="2012">2012</date><idno type="wicri:Area/Pmc/Corpus">000E88</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000E88</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Integrating cereal genomics to support innovation in the Triticeae</title><author><name sortKey="Feuillet, C" sort="Feuillet, C" uniqKey="Feuillet C" first="C." last="Feuillet">C. Feuillet</name><affiliation><nlm:aff id="Aff1">INRA-UBP UMR 1095 Genetics and Diversity of Cereals, Clermont-Ferrand, France</nlm:aff></affiliation></author><author><name sortKey="Stein, N" sort="Stein, N" uniqKey="Stein N" first="N." last="Stein">N. Stein</name><affiliation><nlm:aff id="Aff2">Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany</nlm:aff></affiliation></author><author><name sortKey="Rossini, L" sort="Rossini, L" uniqKey="Rossini L" first="L." last="Rossini">L. Rossini</name><affiliation><nlm:aff id="Aff3">Dipartimento di Produzione Vegetale, Università degli Studi di Milano, Milan, Italy</nlm:aff></affiliation></author><author><name sortKey="Praud, S" sort="Praud, S" uniqKey="Praud S" first="S." last="Praud">S. Praud</name><affiliation><nlm:aff id="Aff4">Biogemma, Site de la Garenne, 90126 Chappes, France</nlm:aff></affiliation></author><author><name sortKey="Mayer, K" sort="Mayer, K" uniqKey="Mayer K" first="K." last="Mayer">K. Mayer</name><affiliation><nlm:aff id="Aff5">Munich Information Center for Protein Sequences/Institute for Bioinformatics and Systems Biology, Helmholtz Center Munich, Neuherberg, Germany</nlm:aff></affiliation></author><author><name sortKey="Schulman, A" sort="Schulman, A" uniqKey="Schulman A" first="A." last="Schulman">A. Schulman</name><affiliation><nlm:aff id="Aff6">MTT/BI Institute of Biotechnology, University of Helsinki, Helsinki, Finland</nlm:aff></affiliation><affiliation><nlm:aff id="Aff7">Plant Genomics Laboratory, MTT Agrifood Research, Jokioinen, Finland</nlm:aff></affiliation></author><author><name sortKey="Eversole, K" sort="Eversole, K" uniqKey="Eversole K" first="K." last="Eversole">K. Eversole</name><affiliation><nlm:aff id="Aff8">Eversole Associates, Wyoming Road, 5207 Bethesda, USA</nlm:aff></affiliation></author><author><name sortKey="Appels, R" sort="Appels, R" uniqKey="Appels R" first="R." last="Appels">R. Appels</name><affiliation><nlm:aff id="Aff9">Center for Comparative Genomics, Murdoch University, Perth, WA 6150 Australia</nlm:aff></affiliation></author></analytic><series><title level="j">Functional & Integrative Genomics</title><idno type="ISSN">1438-793X</idno><idno type="eISSN">1438-7948</idno><imprint><date when="2012">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>The genomic resources of small grain cereals that include some of the most important crop species such as wheat, barley, and rye are attaining a level of completion that now is contributing to new structural and functional studies as well as refining molecular marker development and mapping strategies for increasing the efficiency of breeding processes. The integration of new efforts to obtain reference sequences in bread wheat and barley, in particular, is accelerating the acquisition and interpretation of genome-level analyses in both of these major crops.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Allen, Am" uniqKey="Allen A">AM Allen</name></author><author><name sortKey="Barker, Gla" uniqKey="Barker G">GLA Barker</name></author><author><name sortKey="Berry, St" uniqKey="Berry S">ST Berry</name></author><author><name sortKey="Coghill, Ja" uniqKey="Coghill J">JA Coghill</name></author><author><name sortKey="Gwilliam, R" uniqKey="Gwilliam R">R Gwilliam</name></author><author><name sortKey="Kirby, S" uniqKey="Kirby S">S Kirby</name></author><author><name sortKey="Robinson, P" uniqKey="Robinson P">P Robinson</name></author><author><name sortKey="Brenchley, Rc" uniqKey="Brenchley R">RC Brenchley</name></author><author><name sortKey="D More, R" uniqKey="D More R">R D’Amore</name></author><author><name sortKey="Mckenzie, N" uniqKey="Mckenzie N">N McKenzie</name></author><author><name sortKey="Waite, D" uniqKey="Waite D">D Waite</name></author><author><name sortKey="Hall, A" uniqKey="Hall A">A Hall</name></author><author><name sortKey="Bevan, M" uniqKey="Bevan M">M Bevan</name></author><author><name sortKey="Neil Hall, N" uniqKey="Neil Hall N">N Neil Hall</name></author><author><name sortKey="Edwards, Kj" uniqKey="Edwards K">KJ Edwards</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Allouis, S" uniqKey="Allouis S">S Allouis</name></author><author><name sortKey="Moore, G" uniqKey="Moore G">G Moore</name></author><author><name sortKey="Bellec, A" uniqKey="Bellec A">A Bellec</name></author><author><name sortKey="Sharp, R" uniqKey="Sharp R">R Sharp</name></author><author><name sortKey="Faivre Rampant, P" uniqKey="Faivre Rampant P">P Faivre Rampant</name></author><author><name sortKey="Mortimer, K" uniqKey="Mortimer K">K Mortimer</name></author><author><name sortKey="Pateyron, S" uniqKey="Pateyron S">S Pateyron</name></author><author><name sortKey="Foote, Tn" uniqKey="Foote T">TN Foote</name></author><author><name sortKey="Griffiths, S" uniqKey="Griffiths S">S Griffiths</name></author><author><name sortKey="Caboche, M" uniqKey="Caboche M">M Caboche</name></author><author><name sortKey="Chalhoub, B" uniqKey="Chalhoub B">B Chalhoub</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Ariyadasa, R" uniqKey="Ariyadasa R">R Ariyadasa</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Asp, T" uniqKey="Asp T">T Asp</name></author><author><name sortKey="Byrne, S" uniqKey="Byrne S">S Byrne</name></author><author><name sortKey="Gundlach, H" uniqKey="Gundlach H">H Gundlach</name></author><author><name sortKey="Bruggmann, R" uniqKey="Bruggmann R">R Bruggmann</name></author><author><name sortKey="Mayer, Kfx" uniqKey="Mayer K">KFX Mayer</name></author><author><name sortKey="Andersen, Jr" uniqKey="Andersen J">JR Andersen</name></author><author><name sortKey="Mingliang Xu, M" uniqKey="Mingliang Xu M">M Mingliang Xu</name></author><author><name sortKey="Morten, G" uniqKey="Morten G">G Morten</name></author><author><name sortKey="Lenk, I" uniqKey="Lenk I">I Lenk</name></author><author><name sortKey="Lubberstedt, T" uniqKey="Lubberstedt T">T Lubberstedt</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bennetzen, Jl" uniqKey="Bennetzen J">JL Bennetzen</name></author><author><name sortKey="Schmutz, J" uniqKey="Schmutz J">J Schmutz</name></author><author><name sortKey="Wang, H" uniqKey="Wang H">H Wang</name></author><author><name sortKey="Percifield, R" uniqKey="Percifield R">R Percifield</name></author><author><name sortKey="Hawkins, J" uniqKey="Hawkins J">J Hawkins</name></author><author><name sortKey="Pontaroli, Ac" uniqKey="Pontaroli A">AC Pontaroli</name></author><author><name sortKey="Estep, M" uniqKey="Estep M">M Estep</name></author><author><name sortKey="Feng, L" uniqKey="Feng L">L Feng</name></author><author><name sortKey="Vaughn, Jn" uniqKey="Vaughn J">JN Vaughn</name></author><author><name sortKey="Grimwood, J" uniqKey="Grimwood J">J Grimwood</name></author><author><name sortKey="Jenkins, J" uniqKey="Jenkins J">J Jenkins</name></author><author><name sortKey="Barry, K" uniqKey="Barry K">K Barry</name></author><author><name sortKey="Lindquist, E" uniqKey="Lindquist E">E Lindquist</name></author><author><name sortKey="Hellsten, U" uniqKey="Hellsten U">U Hellsten</name></author><author><name sortKey="Deshpande, S" uniqKey="Deshpande S">S Deshpande</name></author><author><name sortKey="Wang, X" uniqKey="Wang X">X Wang</name></author><author><name sortKey="Wu, X" uniqKey="Wu X">X Wu</name></author><author><name sortKey="Mitros, T" uniqKey="Mitros T">T Mitros</name></author><author><name sortKey="Triplett, J" uniqKey="Triplett J">J Triplett</name></author><author><name sortKey="Yang, X" uniqKey="Yang X">X Yang</name></author><author><name sortKey="Ye, C Y" uniqKey="Ye C">C-Y Ye</name></author><author><name sortKey="Mauro Herrera, M" uniqKey="Mauro Herrera M">M Mauro-Herrera</name></author><author><name sortKey="Wang, L" uniqKey="Wang L">L Wang</name></author><author><name sortKey="Li, P" uniqKey="Li P">P Li</name></author><author><name sortKey="Sharma, M" uniqKey="Sharma M">M Sharma</name></author><author><name sortKey="Sharma, R" uniqKey="Sharma R">R Sharma</name></author><author><name sortKey="Ronald, Pc" uniqKey="Ronald P">PC Ronald</name></author><author><name sortKey="Panaud, O" uniqKey="Panaud O">O Panaud</name></author><author><name sortKey="Kellogg, Ea" uniqKey="Kellogg E">EA Kellogg</name></author><author><name sortKey="Brutnell, Tp" uniqKey="Brutnell T">TP Brutnell</name></author><author><name sortKey="Doust, An" uniqKey="Doust A">AN Doust</name></author><author><name sortKey="Tuskan, Ga" uniqKey="Tuskan G">GA Tuskan</name></author><author><name sortKey="Rokhsar, D" uniqKey="Rokhsar D">D Rokhsar</name></author><author><name sortKey="Devos, Km" uniqKey="Devos K">KM Devos</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berkman, Pj" uniqKey="Berkman P">PJ Berkman</name></author><author><name sortKey="Skarshewski, A" uniqKey="Skarshewski A">A Skarshewski</name></author><author><name sortKey="Lorenc, Mt" uniqKey="Lorenc M">MT Lorenc</name></author><author><name sortKey="Lai, K" uniqKey="Lai K">K Lai</name></author><author><name sortKey="Duran, C" uniqKey="Duran C">C Duran</name></author><author><name sortKey="Ling, Ey" uniqKey="Ling E">EY Ling</name></author><author><name sortKey="Stiller, J" uniqKey="Stiller J">J Stiller</name></author><author><name sortKey="Smits, L" uniqKey="Smits L">L Smits</name></author><author><name sortKey="Imelfort, M" uniqKey="Imelfort M">M Imelfort</name></author><author><name sortKey="Manoli, S" uniqKey="Manoli S">S Manoli</name></author><author><name sortKey="Mckenzie, M" uniqKey="Mckenzie M">M McKenzie</name></author><author><name sortKey="Kubalakova, M" uniqKey="Kubalakova M">M Kubaláková</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Šimková</name></author><author><name sortKey="Batley, J" uniqKey="Batley J">J Batley</name></author><author><name sortKey="Fleury, D" uniqKey="Fleury D">D Fleury</name></author><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Doležel</name></author><author><name sortKey="Edwards, D" uniqKey="Edwards D">D Edwards</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berkman, Pj" uniqKey="Berkman P">PJ Berkman</name></author><author><name sortKey="Skarshewski, A" uniqKey="Skarshewski A">A Skarshewski</name></author><author><name sortKey="Manoli, S" uniqKey="Manoli S">S Manoli</name></author><author><name sortKey="Lorenc, Mt" uniqKey="Lorenc M">MT Lorenc</name></author><author><name sortKey="Stiller, J" uniqKey="Stiller J">J Stiller</name></author><author><name sortKey="Smits, L" uniqKey="Smits L">L Smits</name></author><author><name sortKey="Lai, K" uniqKey="Lai K">K Lai</name></author><author><name sortKey="Campbell, E" uniqKey="Campbell E">E Campbell</name></author><author><name sortKey="Kubalakova, M" uniqKey="Kubalakova M">M Kubaláková</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Simková</name></author><author><name sortKey="Batley, J" uniqKey="Batley J">J Batley</name></author><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Doležel</name></author><author><name sortKey="Hernandez, P" uniqKey="Hernandez P">P Hernandez</name></author><author><name sortKey="Edwards, D" uniqKey="Edwards D">D Edwards</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bertin, I" uniqKey="Bertin I">I Bertin</name></author><author><name sortKey="Zhu, Jh" uniqKey="Zhu J">JH Zhu</name></author><author><name sortKey="Gale, Md" uniqKey="Gale M">MD Gale</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Birchler, Ja" uniqKey="Birchler J">JA Birchler</name></author><author><name sortKey="Gao, Z" uniqKey="Gao Z">Z Gao</name></author><author><name sortKey="Han, F" uniqKey="Han F">F Han</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Breen, J" uniqKey="Breen J">J Breen</name></author><author><name sortKey="Bellgard, M" uniqKey="Bellgard M">M Bellgard</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Breen, J" uniqKey="Breen J">J Breen</name></author><author><name sortKey="Li, D" uniqKey="Li D">D Li</name></author><author><name sortKey="Dunn, Ds" uniqKey="Dunn D">DS Dunn</name></author><author><name sortKey="Bekes, F" uniqKey="Bekes F">F Békés</name></author><author><name sortKey="Kong, X" uniqKey="Kong X">X Kong</name></author><author><name sortKey="Zhang, J" uniqKey="Zhang J">J Zhang</name></author><author><name sortKey="Jia, J" uniqKey="Jia J">J Jia</name></author><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Mago, R" uniqKey="Mago R">R Mago</name></author><author><name sortKey="Ma, W" uniqKey="Ma W">W Ma</name></author><author><name sortKey="Bellgard, M" uniqKey="Bellgard M">M Bellgard</name></author><author><name sortKey="Appels, R" uniqKey="Appels R">R Appels</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Breen, J" uniqKey="Breen J">J Breen</name></author><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Kong, X" uniqKey="Kong X">X Kong</name></author><author><name sortKey="Zhang, J" uniqKey="Zhang J">J Zhang</name></author><author><name sortKey="Ma, W" uniqKey="Ma W">W Ma</name></author><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author><author><name sortKey="Appels, R" uniqKey="Appels R">R Appels</name></author><author><name sortKey="Bellgard, M" uniqKey="Bellgard M">M Bellgard</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Brueggeman, R" uniqKey="Brueggeman R">R Brueggeman</name></author><author><name sortKey="Rostoks, N" uniqKey="Rostoks N">N Rostoks</name></author><author><name sortKey="Kudrna, D" uniqKey="Kudrna D">D Kudrna</name></author><author><name sortKey="Kilian, A" uniqKey="Kilian A">A Kilian</name></author><author><name sortKey="Han, F" uniqKey="Han F">F Han</name></author><author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name></author><author><name sortKey="Druka, A" uniqKey="Druka A">A Druka</name></author><author><name sortKey="Steffenson, B" uniqKey="Steffenson B">B Steffenson</name></author><author><name sortKey="Kleinhofs, A" uniqKey="Kleinhofs A">A Kleinhofs</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Brueggeman, R" uniqKey="Brueggeman R">R Brueggeman</name></author><author><name sortKey="Druka, A" uniqKey="Druka A">A Druka</name></author><author><name sortKey="Nirmala, J" uniqKey="Nirmala J">J Nirmala</name></author><author><name sortKey="Cavileer, T" uniqKey="Cavileer T">T Cavileer</name></author><author><name sortKey="Drader, T" uniqKey="Drader T">T Drader</name></author><author><name sortKey="Rostoks, N" uniqKey="Rostoks N">N Rostoks</name></author><author><name sortKey="Mirlohi, A" uniqKey="Mirlohi A">A Mirlohi</name></author><author><name sortKey="Bennypaul, H" uniqKey="Bennypaul H">H Bennypaul</name></author><author><name sortKey="Gill, U" uniqKey="Gill U">U Gill</name></author><author><name sortKey="Kudrna, D" uniqKey="Kudrna D">D Kudrna</name></author><author><name sortKey="Whitelaw, C" uniqKey="Whitelaw C">C Whitelaw</name></author><author><name sortKey="Kilian, A" uniqKey="Kilian A">A Kilian</name></author><author><name sortKey="Han, F" uniqKey="Han F">F Han</name></author><author><name sortKey="Sun, Y" uniqKey="Sun Y">Y Sun</name></author><author><name sortKey="Gill, K" uniqKey="Gill K">K Gill</name></author><author><name sortKey="Steffenson, B" uniqKey="Steffenson B">B Steffenson</name></author><author><name sortKey="Kleinhofs, A" uniqKey="Kleinhofs A">A Kleinhofs</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Buschges, R" uniqKey="Buschges R">R Büschges</name></author><author><name sortKey="Hollricher, K" uniqKey="Hollricher K">K Hollricher</name></author><author><name sortKey="Panstruga, R" uniqKey="Panstruga R">R Panstruga</name></author><author><name sortKey="Simons, G" uniqKey="Simons G">G Simons</name></author><author><name sortKey="Wolter, M" uniqKey="Wolter M">M Wolter</name></author><author><name sortKey="Frijters, A" uniqKey="Frijters A">A Frijters</name></author><author><name sortKey="Daelen, R" uniqKey="Daelen R">R Daelen</name></author><author><name sortKey="Lee, T" uniqKey="Lee T">T Lee</name></author><author><name sortKey="Diergaarde, P" uniqKey="Diergaarde P">P Diergaarde</name></author><author><name sortKey="Groenendijk, J" uniqKey="Groenendijk J">J Groenendijk</name></author><author><name sortKey="Topsch, S" uniqKey="Topsch S">S Töpsch</name></author><author><name sortKey="Vos, P" uniqKey="Vos P">P Vos</name></author><author><name sortKey="Salamini, F" uniqKey="Salamini F">F Salamini</name></author><author><name sortKey="Schulze Lefert, P" uniqKey="Schulze Lefert P">P Schulze-Lefert</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Caldwell, Ks" uniqKey="Caldwell K">KS Caldwell</name></author><author><name sortKey="Dvorak, J" uniqKey="Dvorak J">J Dvorak</name></author><author><name sortKey="Lagudah, Es" uniqKey="Lagudah E">ES Lagudah</name></author><author><name sortKey="Akhunov, E" uniqKey="Akhunov E">E Akhunov</name></author><author><name sortKey="Luo, M C" uniqKey="Luo M">M-C Luo</name></author><author><name sortKey="Wolters, P" uniqKey="Wolters P">P Wolters</name></author><author><name sortKey="Powell, W" uniqKey="Powell W">W Powell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chantret, N" uniqKey="Chantret N">N Chantret</name></author><author><name sortKey="Salse, J" uniqKey="Salse J">J Salse</name></author><author><name sortKey="Sabot, F" uniqKey="Sabot F">F Sabot</name></author><author><name sortKey="Rahman, S" uniqKey="Rahman S">S Rahman</name></author><author><name sortKey="Bellec, A" uniqKey="Bellec A">A Bellec</name></author><author><name sortKey="Laubin, B" uniqKey="Laubin B">B Laubin</name></author><author><name sortKey="Dubois, I" uniqKey="Dubois I">I Dubois</name></author><author><name sortKey="Dossat, C" uniqKey="Dossat C">C Dossat</name></author><author><name sortKey="Sourdille, P" uniqKey="Sourdille P">P Sourdille</name></author><author><name sortKey="Joudrier, P" uniqKey="Joudrier P">P Joudrier</name></author><author><name sortKey="Gautier, Mf" uniqKey="Gautier M">MF Gautier</name></author><author><name sortKey="Cattolico, L" uniqKey="Cattolico L">L Cattolico</name></author><author><name sortKey="Beckert, M" uniqKey="Beckert M">M Beckert</name></author><author><name sortKey="Aubourg, S" uniqKey="Aubourg S">S Aubourg</name></author><author><name sortKey="Weissenbach, J" uniqKey="Weissenbach J">J Weissenbach</name></author><author><name sortKey="Caboche, M" uniqKey="Caboche M">M Caboche</name></author><author><name sortKey="Bernard, M" uniqKey="Bernard M">M Bernard</name></author><author><name sortKey="Leroy, P" uniqKey="Leroy P">P Leroy</name></author><author><name sortKey="Chalhoub, B" uniqKey="Chalhoub B">B Chalhoub</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Charles, M" uniqKey="Charles M">M Charles</name></author><author><name sortKey="Belcram, H" uniqKey="Belcram H">H Belcram</name></author><author><name sortKey="Just, J" uniqKey="Just J">J Just</name></author><author><name sortKey="Huneau, C" uniqKey="Huneau C">C Huneau</name></author><author><name sortKey="Viollet, A" uniqKey="Viollet A">A Viollet</name></author><author><name sortKey="Couloux, A" uniqKey="Couloux A">A Couloux</name></author><author><name sortKey="Segurens, B" uniqKey="Segurens B">B Segurens</name></author><author><name sortKey="Carter, M" uniqKey="Carter M">M Carter</name></author><author><name sortKey="Huteau, V" uniqKey="Huteau V">V Huteau</name></author><author><name sortKey="Coriton, O" uniqKey="Coriton O">O Coriton</name></author><author><name sortKey="Appels, R" uniqKey="Appels R">R Appels</name></author><author><name sortKey="Samain, S" uniqKey="Samain S">S Samain</name></author><author><name sortKey="Chalhoub, B" uniqKey="Chalhoub B">B Chalhoub</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Charles, M" uniqKey="Charles M">M Charles</name></author><author><name sortKey="Tang, H" uniqKey="Tang H">H Tang</name></author><author><name sortKey="Belcram, H" uniqKey="Belcram H">H Belcram</name></author><author><name sortKey="Paterson, A" uniqKey="Paterson A">A Paterson</name></author><author><name sortKey="Gornicki, P" uniqKey="Gornicki P">P Gornicki</name></author><author><name sortKey="Chalhoub, Bp" uniqKey="Chalhoub B">BP Chalhoub</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Choulet, F" uniqKey="Choulet F">F Choulet</name></author><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Rustenholz, C" uniqKey="Rustenholz C">C Rustenholz</name></author><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Salse, J" uniqKey="Salse J">J Salse</name></author><author><name sortKey="Leroy, P" uniqKey="Leroy P">P Leroy</name></author><author><name sortKey="Schlub, S" uniqKey="Schlub S">S Schlub</name></author><author><name sortKey="Paslier, Mc" uniqKey="Paslier M">MC Paslier</name></author><author><name sortKey="Magdelenat, G" uniqKey="Magdelenat G">G Magdelenat</name></author><author><name sortKey="Gonthier, C" uniqKey="Gonthier C">C Gonthier</name></author><author><name sortKey="Couloux, A" uniqKey="Couloux A">A Couloux</name></author><author><name sortKey="Budak, H" uniqKey="Budak H">H Budak</name></author><author><name sortKey="Breen, J" uniqKey="Breen J">J Breen</name></author><author><name sortKey="Pumphrey, M" uniqKey="Pumphrey M">M Pumphrey</name></author><author><name sortKey="Liu, S" uniqKey="Liu S">S Liu</name></author><author><name sortKey="Kong, X" uniqKey="Kong X">X Kong</name></author><author><name sortKey="Jia, J" uniqKey="Jia J">J Jia</name></author><author><name sortKey="Gut, M" uniqKey="Gut M">M Gut</name></author><author><name sortKey="Brunel, D" uniqKey="Brunel D">D Brunel</name></author><author><name sortKey="Anderson, Ja" uniqKey="Anderson J">JA Anderson</name></author><author><name sortKey="Gill, Bs" uniqKey="Gill B">BS Gill</name></author><author><name sortKey="Appels, R" uniqKey="Appels R">R Appels</name></author><author><name sortKey="Keller, B" uniqKey="Keller B">B Keller</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Close, Tj" uniqKey="Close T">TJ Close</name></author><author><name sortKey="Bhat, Pr" uniqKey="Bhat P">PR Bhat</name></author><author><name sortKey="Lonardi, S" uniqKey="Lonardi S">S Lonardi</name></author><author><name sortKey="Wu, Y" uniqKey="Wu Y">Y Wu</name></author><author><name sortKey="Rostoks, N" uniqKey="Rostoks N">N Rostoks</name></author><author><name sortKey="Ramsay, L" uniqKey="Ramsay L">L Ramsay</name></author><author><name sortKey="Druka, A" uniqKey="Druka A">A Druka</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author><author><name sortKey="Svensson, Jt" uniqKey="Svensson J">JT Svensson</name></author><author><name sortKey="Wanamaker, S" uniqKey="Wanamaker S">S Wanamaker</name></author><author><name sortKey="Bozdag, S" uniqKey="Bozdag S">S Bozdag</name></author><author><name sortKey="Roose, Ml" uniqKey="Roose M">ML Roose</name></author><author><name sortKey="Moscou, Mj" uniqKey="Moscou M">MJ Moscou</name></author><author><name sortKey="Chao, S" uniqKey="Chao S">S Chao</name></author><author><name sortKey="Varshney, Rk" uniqKey="Varshney R">RK Varshney</name></author><author><name sortKey="Sz Cs, P" uniqKey="Sz Cs P">P Szűcs</name></author><author><name sortKey="Sato, K" uniqKey="Sato K">K Sato</name></author><author><name sortKey="Hayes, Pm" uniqKey="Hayes P">PM Hayes</name></author><author><name sortKey="Matthews, De" uniqKey="Matthews D">DE Matthews</name></author><author><name sortKey="Kleinhofs, A" uniqKey="Kleinhofs A">A Kleinhofs</name></author><author><name sortKey="Muehlbauer, Gj" uniqKey="Muehlbauer G">GJ Muehlbauer</name></author><author><name sortKey="Deyoung, J" uniqKey="Deyoung J">J DeYoung</name></author><author><name sortKey="Marshall, Df" uniqKey="Marshall D">DF Marshall</name></author><author><name sortKey="Madishetty, K" uniqKey="Madishetty K">K Madishetty</name></author><author><name sortKey="Fenton, Rd" uniqKey="Fenton R">RD Fenton</name></author><author><name sortKey="Condamine, P" uniqKey="Condamine P">P Condamine</name></author><author><name sortKey="Graner, A" uniqKey="Graner A">A Graner</name></author><author><name sortKey="Waugh, R" uniqKey="Waugh R">R Waugh</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cockram, J" uniqKey="Cockram J">J Cockram</name></author><author><name sortKey="White, J" uniqKey="White J">J White</name></author><author><name sortKey="Zuluaga, Dl" uniqKey="Zuluaga D">DL Zuluaga</name></author><author><name sortKey="Smith, D" uniqKey="Smith D">D Smith</name></author><author><name sortKey="Comadran, J" uniqKey="Comadran J">J Comadran</name></author><author><name sortKey="Macaulay, M" uniqKey="Macaulay M">M Macaulay</name></author><author><name sortKey="Luo, Z" uniqKey="Luo Z">Z Luo</name></author><author><name sortKey="Kearsey, Mj" uniqKey="Kearsey M">MJ Kearsey</name></author><author><name sortKey="Werner, P" uniqKey="Werner P">P Werner</name></author><author><name sortKey="Harrap, D" uniqKey="Harrap D">D Harrap</name></author><author><name sortKey="Tapsell, C" uniqKey="Tapsell C">C Tapsell</name></author><author><name sortKey="Liu, H" uniqKey="Liu H">H Liu</name></author><author><name sortKey="Hedley, Pe" uniqKey="Hedley P">PE Hedley</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author><author><name sortKey="Schulte, D" uniqKey="Schulte D">D Schulte</name></author><author><name sortKey="Steuernagel, B" uniqKey="Steuernagel B">B Steuernagel</name></author><author><name sortKey="Marshall, Df" uniqKey="Marshall D">DF Marshall</name></author><author><name sortKey="Thomas, Wt" uniqKey="Thomas W">WT Thomas</name></author><author><name sortKey="Ramsay, L" uniqKey="Ramsay L">L Ramsay</name></author><author><name sortKey="Mackay, I" uniqKey="Mackay I">I Mackay</name></author><author><name sortKey="Balding, Dj" uniqKey="Balding D">DJ Balding</name></author><author><name sortKey="Consortium, Agoueb" uniqKey="Consortium A">AGOUEB Consortium</name></author><author><name sortKey="Waugh, R" uniqKey="Waugh R">R Waugh</name></author><author><name sortKey="O Ullivan, Dm" uniqKey="O Ullivan D">DM O’Sullivan</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Distelfeld, A" uniqKey="Distelfeld A">A Distelfeld</name></author><author><name sortKey="Uauy, C" uniqKey="Uauy C">C Uauy</name></author><author><name sortKey="Olmos, S" uniqKey="Olmos S">S Olmos</name></author><author><name sortKey="Schlatter, Ar" uniqKey="Schlatter A">AR Schlatter</name></author><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author><author><name sortKey="Fahima, T" uniqKey="Fahima T">T Fahima</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Distelfeld, A" uniqKey="Distelfeld A">A Distelfeld</name></author><author><name sortKey="Pearce, Sp" uniqKey="Pearce S">SP Pearce</name></author><author><name sortKey="Avni, R" uniqKey="Avni R">R Avni</name></author><author><name sortKey="Scherer, B" uniqKey="Scherer B">B Scherer</name></author><author><name sortKey="Uauy, C" uniqKey="Uauy C">C Uauy</name></author><author><name sortKey="Piston, F" uniqKey="Piston F">F Piston</name></author><author><name sortKey="Slade, A" uniqKey="Slade A">A Slade</name></author><author><name sortKey="Zhao, R" uniqKey="Zhao R">R Zhao</name></author><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Dolezel</name></author><author><name sortKey="Kubalakova, M" uniqKey="Kubalakova M">M Kubalakova</name></author><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Bartos, J" uniqKey="Bartos J">J Bartos</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Dolezel</name></author><author><name sortKey="Vrana, J" uniqKey="Vrana J">J Vrana</name></author><author><name sortKey="Safar, J" uniqKey="Safar J">J Safar</name></author><author><name sortKey="Bartos, J" uniqKey="Bartos J">J Bartos</name></author><author><name sortKey="Kubalakova, M" uniqKey="Kubalakova M">M Kubalakova</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Simkova</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Duan, J" uniqKey="Duan J">J Duan</name></author><author><name sortKey="Wu, J" uniqKey="Wu J">J Wu</name></author><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y Liu</name></author><author><name sortKey="Xiao, J" uniqKey="Xiao J">J Xiao</name></author><author><name sortKey="Ziao, J" uniqKey="Ziao J">J Ziao</name></author><author><name sortKey="Zhao, G" uniqKey="Zhao G">G Zhao</name></author><author><name sortKey="Jia, J" uniqKey="Jia J">J Jia</name></author><author><name sortKey="Kong, X" uniqKey="Kong X">X Kong</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author><author><name sortKey="Dvorak, J" uniqKey="Dvorak J">J Dvorak</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author><author><name sortKey="Dvorak, J" uniqKey="Dvorak J">J Dvorak</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Elshire, Rj" uniqKey="Elshire R">RJ Elshire</name></author><author><name sortKey="Glaubitz, Jc" uniqKey="Glaubitz J">JC Glaubitz</name></author><author><name sortKey="Sun, Q" uniqKey="Sun Q">Q Sun</name></author><author><name sortKey="Poland, Ja" uniqKey="Poland J">JA Poland</name></author><author><name sortKey="Kawamoto, K" uniqKey="Kawamoto K">K Kawamoto</name></author><author><name sortKey="Buckler, Es" uniqKey="Buckler E">ES Buckler</name></author><author><name sortKey="Mitchell, Se" uniqKey="Mitchell S">SE Mitchell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Faris, Jd" uniqKey="Faris J">JD Faris</name></author><author><name sortKey="Zhang, Z" uniqKey="Zhang Z">Z Zhang</name></author><author><name sortKey="Lu, H" uniqKey="Lu H">H Lu</name></author><author><name sortKey="Lu, S" uniqKey="Lu S">S Lu</name></author><author><name sortKey="Reddy, L" uniqKey="Reddy L">L Reddy</name></author><author><name sortKey="Cloutier, S" uniqKey="Cloutier S">S Cloutier</name></author><author><name sortKey="Fellers, Jp" uniqKey="Fellers J">JP Fellers</name></author><author><name sortKey="Meinhardt, Sw" uniqKey="Meinhardt S">SW Meinhardt</name></author><author><name sortKey="Rasmussen, Jb" uniqKey="Rasmussen J">JB Rasmussen</name></author><author><name sortKey="Xu, Ss" uniqKey="Xu S">SS Xu</name></author><author><name sortKey="Oliver, Rp" uniqKey="Oliver R">RP Oliver</name></author><author><name sortKey="Simons, Kj" uniqKey="Simons K">KJ Simons</name></author><author><name sortKey="Friesen, Tl" uniqKey="Friesen T">TL Friesen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author><author><name sortKey="Eversole, K" uniqKey="Eversole K">K Eversole</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author><author><name sortKey="Leach, Je" uniqKey="Leach J">JE Leach</name></author><author><name sortKey="Rogers, J" uniqKey="Rogers J">J Rogers</name></author><author><name sortKey="Schnable, Ps" uniqKey="Schnable P">PS Schnable</name></author><author><name sortKey="Eversole, K" uniqKey="Eversole K">K Eversole</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Flavell, Aj" uniqKey="Flavell A">AJ Flavell</name></author><author><name sortKey="Knox, Mr" uniqKey="Knox M">MR Knox</name></author><author><name sortKey="Pearce, Sr" uniqKey="Pearce S">SR Pearce</name></author><author><name sortKey="Ellis, Thn" uniqKey="Ellis T">THN Ellis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Frenkel, Z" uniqKey="Frenkel Z">Z Frenkel</name></author><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Mester, D" uniqKey="Mester D">D Mester</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author><author><name sortKey="Korol, A" uniqKey="Korol A">A Korol</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fu, D" uniqKey="Fu D">D Fu</name></author><author><name sortKey="Uauy, C" uniqKey="Uauy C">C Uauy</name></author><author><name sortKey="Distelfeld, A" uniqKey="Distelfeld A">A Distelfeld</name></author><author><name sortKey="Blechl, A" uniqKey="Blechl A">A Blechl</name></author><author><name sortKey="Epstein, L" uniqKey="Epstein L">L Epstein</name></author><author><name sortKey="Chen, X" uniqKey="Chen X">X Chen</name></author><author><name sortKey="Sela, H" uniqKey="Sela H">H Sela</name></author><author><name sortKey="Fahima, T" uniqKey="Fahima T">T Fahima</name></author><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fu, Y" uniqKey="Fu Y">Y Fu</name></author><author><name sortKey="Springer, Nm" uniqKey="Springer N">NM Springer</name></author><author><name sortKey="Ying, K" uniqKey="Ying K">K Ying</name></author><author><name sortKey="Yeh, C T" uniqKey="Yeh C">C-T Yeh</name></author><author><name sortKey="Iniguez, Al" uniqKey="Iniguez A">AL Iniguez</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gottwald, S" uniqKey="Gottwald S">S Gottwald</name></author><author><name sortKey="Bauer, P" uniqKey="Bauer P">P Bauer</name></author><author><name sortKey="Komatsuda, T" uniqKey="Komatsuda T">T Komatsuda</name></author><author><name sortKey="Lundqvist, U" uniqKey="Lundqvist U">U Lundqvist</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Heffner, El" uniqKey="Heffner E">EL Heffner</name></author><author><name sortKey="Lorenz, Aj" uniqKey="Lorenz A">AJ Lorenz</name></author><author><name sortKey="Jannink, J L" uniqKey="Jannink J">J-L Jannink</name></author><author><name sortKey="Sorrells, Me" uniqKey="Sorrells M">ME Sorrells</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Houston, K" uniqKey="Houston K">K Houston</name></author><author><name sortKey="Druka, A" uniqKey="Druka A">A Druka</name></author><author><name sortKey="Bonar, N" uniqKey="Bonar N">N Bonar</name></author><author><name sortKey="Macaulay, M" uniqKey="Macaulay M">M Macaulay</name></author><author><name sortKey="Lundqvist, U" uniqKey="Lundqvist U">U Lundqvist</name></author><author><name sortKey="Franckowiak, J" uniqKey="Franckowiak J">J Franckowiak</name></author><author><name sortKey="Morgante, M" uniqKey="Morgante M">M Morgante</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author><author><name sortKey="Waugh, R" uniqKey="Waugh R">R Waugh</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Huang, L" uniqKey="Huang L">L Huang</name></author><author><name sortKey="Brooks, Sa" uniqKey="Brooks S">SA Brooks</name></author><author><name sortKey="Li, W" uniqKey="Li W">W Li</name></author><author><name sortKey="Fellers, Jp" uniqKey="Fellers J">JP Fellers</name></author><author><name sortKey="Trick, Hn" uniqKey="Trick H">HN Trick</name></author><author><name sortKey="Gill, Bs" uniqKey="Gill B">BS Gill</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Hui, L" uniqKey="Hui L">L Hui</name></author><author><name sortKey="Mcnicol, J" uniqKey="Mcnicol J">J McNicol</name></author><author><name sortKey="Bayer, M" uniqKey="Bayer M">M Bayer</name></author><author><name sortKey="Morris, Ja" uniqKey="Morris J">JA Morris</name></author><author><name sortKey="Cardle, L" uniqKey="Cardle L">L Cardle</name></author><author><name sortKey="Marshall, Df" uniqKey="Marshall D">DF Marshall</name></author><author><name sortKey="Schulte, D" uniqKey="Schulte D">D Schulte</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author><author><name sortKey="Shi, B J" uniqKey="Shi B">B-J Shi</name></author><author><name sortKey="Taudien, S" uniqKey="Taudien S">S Taudien</name></author><author><name sortKey="Waugh, R" uniqKey="Waugh R">R Waugh</name></author><author><name sortKey="Hedley, Pe" uniqKey="Hedley P">PE Hedley</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Kanisay, L" uniqKey="Kanisay L">L Kanisay</name></author><author><name sortKey="Dawe, Rk" uniqKey="Dawe R">RK Dawe</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Komatsuda, T" uniqKey="Komatsuda T">T Komatsuda</name></author><author><name sortKey="Pourkheirandish, M" uniqKey="Pourkheirandish M">M Pourkheirandish</name></author><author><name sortKey="He, C" uniqKey="He C">C He</name></author><author><name sortKey="Azhaguvel, P" uniqKey="Azhaguvel P">P Azhaguvel</name></author><author><name sortKey="Kanamori, H" uniqKey="Kanamori H">H Kanamori</name></author><author><name sortKey="Perovic, D" uniqKey="Perovic D">D Perovic</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author><author><name sortKey="Graner, A" uniqKey="Graner A">A Graner</name></author><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Tagiri, A" uniqKey="Tagiri A">A Tagiri</name></author><author><name sortKey="Lundqvist, U" uniqKey="Lundqvist U">U Lundqvist</name></author><author><name sortKey="Fujimura, T" uniqKey="Fujimura T">T Fujimura</name></author><author><name sortKey="Matsuoka, M" uniqKey="Matsuoka M">M Matsuoka</name></author><author><name sortKey="Matsumoto, T" uniqKey="Matsumoto T">T Matsumoto</name></author><author><name sortKey="Yano, M" uniqKey="Yano M">M Yano</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Krattinger, S" uniqKey="Krattinger S">S Krattinger</name></author><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Keller, B" uniqKey="Keller B">B Keller</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Krattinger, Sg" uniqKey="Krattinger S">SG Krattinger</name></author><author><name sortKey="Lagudah, Es" uniqKey="Lagudah E">ES Lagudah</name></author><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Risk, Jm" uniqKey="Risk J">JM Risk</name></author><author><name sortKey="Ashton, Ar" uniqKey="Ashton A">AR Ashton</name></author><author><name sortKey="Selter, Ll" uniqKey="Selter L">LL Selter</name></author><author><name sortKey="Matsumoto, T" uniqKey="Matsumoto T">T Matsumoto</name></author><author><name sortKey="Keller, B" uniqKey="Keller B">B Keller</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kumar, A" uniqKey="Kumar A">A Kumar</name></author><author><name sortKey="Bassi, F" uniqKey="Bassi F">F Bassi</name></author><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Al Azzam, O" uniqKey="Al Azzam O">O Al-Azzam</name></author><author><name sortKey="Michalack De Jimenez, M" uniqKey="Michalack De Jimenez M">M Michalack de Jimenez</name></author><author><name sortKey="Denton, Am" uniqKey="Denton A">AM Denton</name></author><author><name sortKey="Gu, Yq" uniqKey="Gu Y">YQ Gu</name></author><author><name sortKey="Iqbal, Mj" uniqKey="Iqbal M">MJ Iqbal</name></author><author><name sortKey="Huttner, E" uniqKey="Huttner E">E Huttner</name></author><author><name sortKey="Kilian, A" uniqKey="Kilian A">A Kilian</name></author><author><name sortKey="Kumar, S" uniqKey="Kumar S">S Kumar</name></author><author><name sortKey="Goyal, A" uniqKey="Goyal A">A Goyal</name></author><author><name sortKey="Tiwari, V" uniqKey="Tiwari V">V Tiwari</name></author><author><name sortKey="Dogramaci, M" uniqKey="Dogramaci M">M Dogramaci</name></author><author><name sortKey="Balyan, Hs" uniqKey="Balyan H">HS Balyan</name></author><author><name sortKey="Dhaliwal, Hs" uniqKey="Dhaliwal H">HS Dhaliwal</name></author><author><name sortKey="Gupta, Pk" uniqKey="Gupta P">PK Gupta</name></author><author><name sortKey="Randhawa, Gs" uniqKey="Randhawa G">GS Randhawa</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author><author><name sortKey="Pawlowski, Wp" uniqKey="Pawlowski W">WP Pawlowski</name></author><author><name sortKey="Kianian, Sf" uniqKey="Kianian S">SF Kianian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lazo, Gr" uniqKey="Lazo G">GR Lazo</name></author><author><name sortKey="Chao, S" uniqKey="Chao S">S Chao</name></author><author><name sortKey="Hummel, Dd" uniqKey="Hummel D">DD Hummel</name></author><author><name sortKey="Edwards, H" uniqKey="Edwards H">H Edwards</name></author><author><name sortKey="Crossman, Cc" uniqKey="Crossman C">CC Crossman</name></author><author><name sortKey="Lui, N" uniqKey="Lui N">N Lui</name></author><author><name sortKey="Matthews, De" uniqKey="Matthews D">DE Matthews</name></author><author><name sortKey="Carollo, Vl" uniqKey="Carollo V">VL Carollo</name></author><author><name sortKey="Hane, Dl" uniqKey="Hane D">DL Hane</name></author><author><name sortKey="You, Fm" uniqKey="You F">FM You</name></author><author><name sortKey="Butler, Ge" uniqKey="Butler G">GE Butler</name></author><author><name sortKey="Miller, Re" uniqKey="Miller R">RE Miller</name></author><author><name sortKey="Close, Tj" uniqKey="Close T">TJ Close</name></author><author><name sortKey="Peng, Jh" uniqKey="Peng J">JH Peng</name></author><author><name sortKey="Lapitan, Nlv" uniqKey="Lapitan N">NLV Lapitan</name></author><author><name sortKey="Gustafson, Jp" uniqKey="Gustafson J">JP Gustafson</name></author><author><name sortKey="Qi, Ll" uniqKey="Qi L">LL Qi</name></author><author><name sortKey="Echalier, B" uniqKey="Echalier B">B Echalier</name></author><author><name sortKey="Gill, Bs" uniqKey="Gill B">BS Gill</name></author><author><name sortKey="Dilbirligi, M" uniqKey="Dilbirligi M">M Dilbirligi</name></author><author><name sortKey="Randhawa, Hs" uniqKey="Randhawa H">HS Randhawa</name></author><author><name sortKey="Gill, Ks" uniqKey="Gill K">KS Gill</name></author><author><name sortKey="Greene, Ra" uniqKey="Greene R">RA Greene</name></author><author><name sortKey="Sorrells, Me" uniqKey="Sorrells M">ME Sorrells</name></author><author><name sortKey="Akhunov, Ed" uniqKey="Akhunov E">ED Akhunov</name></author><author><name sortKey="Dvorak, J" uniqKey="Dvorak J">J Dvorak</name></author><author><name sortKey="Linkiewicz, Am" uniqKey="Linkiewicz A">AM Linkiewicz</name></author><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author><author><name sortKey="Hossain, Kg" uniqKey="Hossain K">KG Hossain</name></author><author><name sortKey="Kalavacharla, V" uniqKey="Kalavacharla V">V Kalavacharla</name></author><author><name sortKey="Kianian, Sf" uniqKey="Kianian S">SF Kianian</name></author><author><name sortKey="Mahmoud, Aa" uniqKey="Mahmoud A">AA Mahmoud</name></author><author><name sortKey="Miftahudin, X F" uniqKey="Miftahudin X">X-F Miftahudin</name></author><author><name sortKey="Ma, Ej" uniqKey="Ma E">EJ Ma</name></author><author><name sortKey="Conley, Ja" uniqKey="Conley J">JA Conley</name></author><author><name sortKey="Anderson, Ms" uniqKey="Anderson M">MS Anderson</name></author><author><name sortKey="Pathan, Ht" uniqKey="Pathan H">HT Pathan</name></author><author><name sortKey="Nguyen, Pe" uniqKey="Nguyen P">PE Nguyen</name></author><author><name sortKey="Mcguire, Coq" uniqKey="Mcguire C">COQ McGuire</name></author><author><name sortKey="Anderson, Od" uniqKey="Anderson O">OD Anderson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Couviour, F" uniqKey="Couviour F">F Couviour</name></author><author><name sortKey="Faure, S" uniqKey="Faure S">S Faure</name></author><author><name sortKey="Poupard, B" uniqKey="Poupard B">B Poupard</name></author><author><name sortKey="Flodrops, Y" uniqKey="Flodrops Y">Y Flodrops</name></author><author><name sortKey="Dubreuil, P" uniqKey="Dubreuil P">P Dubreuil</name></author><author><name sortKey="Praud, S" uniqKey="Praud S">S Praud</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Leroy, P" uniqKey="Leroy P">P Leroy</name></author><author><name sortKey="Guilhot, N" uniqKey="Guilhot N">N Guilhot</name></author><author><name sortKey="Sakai, H" uniqKey="Sakai H">H Sakai</name></author><author><name sortKey="Bernard, A" uniqKey="Bernard A">A Bernard</name></author><author><name sortKey="Choulet, F" uniqKey="Choulet F">F Choulet</name></author><author><name sortKey="Theil, S" uniqKey="Theil S">S Theil</name></author><author><name sortKey="Reboux, S" uniqKey="Reboux S">S Reboux</name></author><author><name sortKey="Amano, N" uniqKey="Amano N">N Amano</name></author><author><name sortKey="Flutre, T" uniqKey="Flutre T">T Flutre</name></author><author><name sortKey="Pellegrin, C" uniqKey="Pellegrin C">C Pellegrin</name></author><author><name sortKey="Ohyanagi, H" uniqKey="Ohyanagi H">H Ohyanagi</name></author><author><name sortKey="Seidel, M" uniqKey="Seidel M">M Seidel</name></author><author><name sortKey="Giacomoni, F" uniqKey="Giacomoni F">F Giacomoni</name></author><author><name sortKey="Reichstadt, M" uniqKey="Reichstadt M">M Reichstadt</name></author><author><name sortKey="Alaux, M" uniqKey="Alaux M">M Alaux</name></author><author><name sortKey="Gicquello, E" uniqKey="Gicquello E">E Gicquello</name></author><author><name sortKey="Legeai, F" uniqKey="Legeai F">F Legeai</name></author><author><name sortKey="Cerutti, L" uniqKey="Cerutti L">L Cerutti</name></author><author><name sortKey="Tanaka, T" uniqKey="Tanaka T">T Tanaka</name></author><author><name sortKey="Mayer, K" uniqKey="Mayer K">K Mayer</name></author><author><name sortKey="Itoh, T" uniqKey="Itoh T">T Itoh</name></author><author><name sortKey="Quesneville, H" uniqKey="Quesneville H">H Quesneville</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y Liu</name></author><author><name sortKey="He, Z" uniqKey="He Z">Z He</name></author><author><name sortKey="Appels, R" uniqKey="Appels R">R Appels</name></author><author><name sortKey="Xia, X" uniqKey="Xia X">X Xia</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Luo, Mc" uniqKey="Luo M">MC Luo</name></author><author><name sortKey="Thomas, C" uniqKey="Thomas C">C Thomas</name></author><author><name sortKey="You, Fm" uniqKey="You F">FM You</name></author><author><name sortKey="Hsiao, J" uniqKey="Hsiao J">J Hsiao</name></author><author><name sortKey="Ouyang, S" uniqKey="Ouyang S">S Ouyang</name></author><author><name sortKey="Buell, Cr" uniqKey="Buell C">CR Buell</name></author><author><name sortKey="Malandro, M" uniqKey="Malandro M">M Malandro</name></author><author><name sortKey="Mcguire, Pe" uniqKey="Mcguire P">PE McGuire</name></author><author><name sortKey="Anderson, Od" uniqKey="Anderson O">OD Anderson</name></author><author><name sortKey="Dvorak, J" uniqKey="Dvorak J">J Dvorak</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mackay, I" uniqKey="Mackay I">I Mackay</name></author><author><name sortKey="Powell, W" uniqKey="Powell W">W Powell</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mayer, Kf" uniqKey="Mayer K">KF Mayer</name></author><author><name sortKey="Taudien, S" uniqKey="Taudien S">S Taudien</name></author><author><name sortKey="Martis, M" uniqKey="Martis M">M Martis</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Simková</name></author><author><name sortKey="Suchankova, P" uniqKey="Suchankova P">P Suchánková</name></author><author><name sortKey="Gundlach, H" uniqKey="Gundlach H">H Gundlach</name></author><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Petzold, A" uniqKey="Petzold A">A Petzold</name></author><author><name sortKey="Felder, M" uniqKey="Felder M">M Felder</name></author><author><name sortKey="Steuernagel, B" uniqKey="Steuernagel B">B Steuernagel</name></author><author><name sortKey="Scholz, U" uniqKey="Scholz U">U Scholz</name></author><author><name sortKey="Graner, A" uniqKey="Graner A">A Graner</name></author><author><name sortKey="Platzer, M" uniqKey="Platzer M">M Platzer</name></author><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Dolezel</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mayer, Kf" uniqKey="Mayer K">KF Mayer</name></author><author><name sortKey="Martis, M" uniqKey="Martis M">M Martis</name></author><author><name sortKey="Hedley, Pe" uniqKey="Hedley P">PE Hedley</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Simková</name></author><author><name sortKey="Liu, H" uniqKey="Liu H">H Liu</name></author><author><name sortKey="Morris, Ja" uniqKey="Morris J">JA Morris</name></author><author><name sortKey="Steuernagel, B" uniqKey="Steuernagel B">B Steuernagel</name></author><author><name sortKey="Taudien, S" uniqKey="Taudien S">S Taudien</name></author><author><name sortKey="Roessner, S" uniqKey="Roessner S">S Roessner</name></author><author><name sortKey="Gundlach, H" uniqKey="Gundlach H">H Gundlach</name></author><author><name sortKey="Kubalakova, M" uniqKey="Kubalakova M">M Kubaláková</name></author><author><name sortKey="Suchankova, P" uniqKey="Suchankova P">P Suchánková</name></author><author><name sortKey="Murat, F" uniqKey="Murat F">F Murat</name></author><author><name sortKey="Felder, M" uniqKey="Felder M">M Felder</name></author><author><name sortKey="Nussbaumer, T" uniqKey="Nussbaumer T">T Nussbaumer</name></author><author><name sortKey="Graner, A" uniqKey="Graner A">A Graner</name></author><author><name sortKey="Salse, J" uniqKey="Salse J">J Salse</name></author><author><name sortKey="Endo, T" uniqKey="Endo T">T Endo</name></author><author><name sortKey="Sakai, H" uniqKey="Sakai H">H Sakai</name></author><author><name sortKey="Tanaka, T" uniqKey="Tanaka T">T Tanaka</name></author><author><name sortKey="Itoh, T" uniqKey="Itoh T">T Itoh</name></author><author><name sortKey="Sato, K" uniqKey="Sato K">K Sato</name></author><author><name sortKey="Platzer, M" uniqKey="Platzer M">M Platzer</name></author><author><name sortKey="Matsumoto, T" uniqKey="Matsumoto T">T Matsumoto</name></author><author><name sortKey="Scholz, U" uniqKey="Scholz U">U Scholz</name></author><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Dolezel</name></author><author><name sortKey="Waugh, R" uniqKey="Waugh R">R Waugh</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Meuwissen, Th" uniqKey="Meuwissen T">TH Meuwissen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Miedaner, T" uniqKey="Miedaner T">T Miedaner</name></author><author><name sortKey="Korzun, V" uniqKey="Korzun V">V Korzun</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Mu Oz Amatriain, M" uniqKey="Mu Oz Amatriain M">M Muñoz-Amatriaín</name></author><author><name sortKey="Moscou, Mj" uniqKey="Moscou M">MJ Moscou</name></author><author><name sortKey="Bhat, Pr" uniqKey="Bhat P">PR Bhat</name></author><author><name sortKey="Svensson, Jt" uniqKey="Svensson J">JT Svensson</name></author><author><name sortKey="Bartos, J" uniqKey="Bartos J">J Bartoš</name></author><author><name sortKey="Suchankova, P" uniqKey="Suchankova P">P Suchánková</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Šimková</name></author><author><name sortKey="Endo, Tr" uniqKey="Endo T">TR Endo</name></author><author><name sortKey="Fenton, Rd" uniqKey="Fenton R">RD Fenton</name></author><author><name sortKey="Lonardi, S" uniqKey="Lonardi S">S Lonardi</name></author><author><name sortKey="Castillo, Am" uniqKey="Castillo A">AM Castillo</name></author><author><name sortKey="Chao, S" uniqKey="Chao S">S Chao</name></author><author><name sortKey="Cistue, L" uniqKey="Cistue L">L Cistué</name></author><author><name sortKey="Cuesta Marcos, A" uniqKey="Cuesta Marcos A">A Cuesta-Marcos</name></author><author><name sortKey="Forrest, Kl" uniqKey="Forrest K">KL Forrest</name></author><author><name sortKey="Hayden, Mj" uniqKey="Hayden M">MJ Hayden</name></author><author><name sortKey="Hayes, Pm" uniqKey="Hayes P">PM Hayes</name></author><author><name sortKey="Horsley, Rd" uniqKey="Horsley R">RD Horsley</name></author><author><name sortKey="Makoto, K" uniqKey="Makoto K">K Makoto</name></author><author><name sortKey="Moody, D" uniqKey="Moody D">D Moody</name></author><author><name sortKey="Sato, K" uniqKey="Sato K">K Sato</name></author><author><name sortKey="Valles, Mp" uniqKey="Valles M">MP Vallés</name></author><author><name sortKey="Wulff, Bbh" uniqKey="Wulff B">BBH Wulff</name></author><author><name sortKey="Muehlbauer, Gj" uniqKey="Muehlbauer G">GJ Muehlbauer</name></author><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Doležel</name></author><author><name sortKey="Close, Tj" uniqKey="Close T">TJ Close</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nair, Sk" uniqKey="Nair S">SK Nair</name></author><author><name sortKey="Wang, N" uniqKey="Wang N">N Wang</name></author><author><name sortKey="Turuspekov, Y" uniqKey="Turuspekov Y">Y Turuspekov</name></author><author><name sortKey="Pourkheirandish, M" uniqKey="Pourkheirandish M">M Pourkheirandish</name></author><author><name sortKey="Sinsuwongwat, S" uniqKey="Sinsuwongwat S">S Sinsuwongwat</name></author><author><name sortKey="Chen, G" uniqKey="Chen G">G Chen</name></author><author><name sortKey="Sameri, M" uniqKey="Sameri M">M Sameri</name></author><author><name sortKey="Tagiri, A" uniqKey="Tagiri A">A Tagiri</name></author><author><name sortKey="Honda, I" uniqKey="Honda I">I Honda</name></author><author><name sortKey="Watanabe, Y" uniqKey="Watanabe Y">Y Watanabe</name></author><author><name sortKey="Kanamori, H" uniqKey="Kanamori H">H Kanamori</name></author><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author><author><name sortKey="Nagamura, Y" uniqKey="Nagamura Y">Y Nagamura</name></author><author><name sortKey="Matsumoto, T" uniqKey="Matsumoto T">T Matsumoto</name></author><author><name sortKey="Komatsuda, T" uniqKey="Komatsuda T">T Komatsuda</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Paterson, Ah" uniqKey="Paterson A">AH Paterson</name></author><author><name sortKey="Bowers, Je" uniqKey="Bowers J">JE Bowers</name></author><author><name sortKey="Bruggmann, R" uniqKey="Bruggmann R">R Bruggmann</name></author><author><name sortKey="Dubchak, I" uniqKey="Dubchak I">I Dubchak</name></author><author><name sortKey="Grimwood, J" uniqKey="Grimwood J">J Grimwood</name></author><author><name sortKey="Gundlach, H" uniqKey="Gundlach H">H Gundlach</name></author><author><name sortKey="Haberer, G" uniqKey="Haberer G">G Haberer</name></author><author><name sortKey="Hellsten, U" uniqKey="Hellsten U">U Hellsten</name></author><author><name sortKey="Mitros, T" uniqKey="Mitros T">T Mitros</name></author><author><name sortKey="Poliakov, A" uniqKey="Poliakov A">A Poliakov</name></author><author><name sortKey="Schmutz, J" uniqKey="Schmutz J">J Schmutz</name></author><author><name sortKey="Spannagl, M" uniqKey="Spannagl M">M Spannagl</name></author><author><name sortKey="Tang, H" uniqKey="Tang H">H Tang</name></author><author><name sortKey="Wang, X" uniqKey="Wang X">X Wang</name></author><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Bharti, Ak" uniqKey="Bharti A">AK Bharti</name></author><author><name sortKey="Chapman, J" uniqKey="Chapman J">J Chapman</name></author><author><name sortKey="Feltus, Fa" uniqKey="Feltus F">FA Feltus</name></author><author><name sortKey="Gowik, U" uniqKey="Gowik U">U Gowik</name></author><author><name sortKey="Grigoriev, Iv" uniqKey="Grigoriev I">IV Grigoriev</name></author><author><name sortKey="Lyons, E" uniqKey="Lyons E">E Lyons</name></author><author><name sortKey="Maher, Ca" uniqKey="Maher C">CA Maher</name></author><author><name sortKey="Martis, M" uniqKey="Martis M">M Martis</name></author><author><name sortKey="Narechania, A" uniqKey="Narechania A">A Narechania</name></author><author><name sortKey="Otillar, Rp" uniqKey="Otillar R">RP Otillar</name></author><author><name sortKey="Penning, Bw" uniqKey="Penning B">BW Penning</name></author><author><name sortKey="Salamov, Aa" uniqKey="Salamov A">AA Salamov</name></author><author><name sortKey="Wang, Y" uniqKey="Wang Y">Y Wang</name></author><author><name sortKey="Zhang, L" uniqKey="Zhang L">L Zhang</name></author><author><name sortKey="Carpita, Nc" uniqKey="Carpita N">NC Carpita</name></author><author><name sortKey="Freeling, M" uniqKey="Freeling M">M Freeling</name></author><author><name sortKey="Gingle, Ar" uniqKey="Gingle A">AR Gingle</name></author><author><name sortKey="Hash, Ct" uniqKey="Hash C">CT Hash</name></author><author><name sortKey="Keller, B" uniqKey="Keller B">B Keller</name></author><author><name sortKey="Klein, P" uniqKey="Klein P">P Klein</name></author><author><name sortKey="Kresovich, S" uniqKey="Kresovich S">S Kresovich</name></author><author><name sortKey="Mccann, Mc" uniqKey="Mccann M">MC McCann</name></author><author><name sortKey="Ming, R" uniqKey="Ming R">R Ming</name></author><author><name sortKey="Peterson, Dg" uniqKey="Peterson D">DG Peterson</name></author><author><name sortKey="Mehboob Ur, R" uniqKey="Mehboob Ur R">R Mehboob ur</name></author><author><name sortKey="Ware, D" uniqKey="Ware D">D Ware</name></author><author><name sortKey="Westhoff, P" uniqKey="Westhoff P">P Westhoff</name></author><author><name sortKey="Mayer, Kfx" uniqKey="Mayer K">KFX Mayer</name></author><author><name sortKey="Messing, J" uniqKey="Messing J">J Messing</name></author><author><name sortKey="Rokhsar, Ds" uniqKey="Rokhsar D">DS Rokhsar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Sourdille, P" uniqKey="Sourdille P">P Sourdille</name></author><author><name sortKey="Salse, J" uniqKey="Salse J">J Salse</name></author><author><name sortKey="Saintenac, C" uniqKey="Saintenac C">C Saintenac</name></author><author><name sortKey="Choulet, F" uniqKey="Choulet F">F Choulet</name></author><author><name sortKey="Leroy, P" uniqKey="Leroy P">P Leroy</name></author><author><name sortKey="Korol, A" uniqKey="Korol A">A Korol</name></author><author><name sortKey="Michalak, M" uniqKey="Michalak M">M Michalak</name></author><author><name sortKey="Kianian, S" uniqKey="Kianian S">S Kianian</name></author><author><name sortKey="Spielmeyer, W" uniqKey="Spielmeyer W">W Spielmeyer</name></author><author><name sortKey="Lagudah, E" uniqKey="Lagudah E">E Lagudah</name></author><author><name sortKey="Somers, D" uniqKey="Somers D">D Somers</name></author><author><name sortKey="Kilian, A" uniqKey="Kilian A">A Kilian</name></author><author><name sortKey="Alaux, M" uniqKey="Alaux M">M Alaux</name></author><author><name sortKey="Vautrin, S" uniqKey="Vautrin S">S Vautrin</name></author><author><name sortKey="Berges, H" uniqKey="Berges H">H Berges</name></author><author><name sortKey="Eversole, K" uniqKey="Eversole K">K Eversole</name></author><author><name sortKey="Appels, R" uniqKey="Appels R">R Appels</name></author><author><name sortKey="Safar, J" uniqKey="Safar J">J Safar</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Simkova</name></author><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Dolezel</name></author><author><name sortKey="Bernard, M" uniqKey="Bernard M">M Bernard</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Faure, S" uniqKey="Faure S">S Faure</name></author><author><name sortKey="Choulet, F" uniqKey="Choulet F">F Choulet</name></author><author><name sortKey="Roger, D" uniqKey="Roger D">D Roger</name></author><author><name sortKey="Gauthier, V" uniqKey="Gauthier V">V Gauthier</name></author><author><name sortKey="Martinant, Jp" uniqKey="Martinant J">JP Martinant</name></author><author><name sortKey="Sourdille, P" uniqKey="Sourdille P">P Sourdille</name></author><author><name sortKey="Balfourier, F" uniqKey="Balfourier F">F Balfourier</name></author><author><name sortKey="Paslier, Mc" uniqKey="Paslier M">MC Paslier</name></author><author><name sortKey="Chauveau, A" uniqKey="Chauveau A">A Chauveau</name></author><author><name sortKey="Cakir, M" uniqKey="Cakir M">M Cakir</name></author><author><name sortKey="Gandon, B" uniqKey="Gandon B">B Gandon</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Sourdille, P" uniqKey="Sourdille P">P Sourdille</name></author><author><name sortKey="Mackay, I" uniqKey="Mackay I">I Mackay</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Philippe, R" uniqKey="Philippe R">R Philippe</name></author><author><name sortKey="Choulet, F" uniqKey="Choulet F">F Choulet</name></author><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Oeveren, J" uniqKey="Oeveren J">J Oeveren</name></author><author><name sortKey="Tang, J" uniqKey="Tang J">J Tang</name></author><author><name sortKey="Wittenberg, Ah" uniqKey="Wittenberg A">AH Wittenberg</name></author><author><name sortKey="Janssen, A" uniqKey="Janssen A">A Janssen</name></author><author><name sortKey="Eijk, Mj" uniqKey="Eijk M">MJ Eijk</name></author><author><name sortKey="Stormo, K" uniqKey="Stormo K">K Stormo</name></author><author><name sortKey="Alberti, A" uniqKey="Alberti A">A Alberti</name></author><author><name sortKey="Wincker, P" uniqKey="Wincker P">P Wincker</name></author><author><name sortKey="Akhunov, E" uniqKey="Akhunov E">E Akhunov</name></author><author><name sortKey="Vossen, E" uniqKey="Vossen E">E Vossen</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Poland, Ja" uniqKey="Poland J">JA Poland</name></author><author><name sortKey="Brown, Pj" uniqKey="Brown P">PJ Brown</name></author><author><name sortKey="Sorrells, Me" uniqKey="Sorrells M">ME Sorrells</name></author><author><name sortKey="Jannink, Jl" uniqKey="Jannink J">JL Jannink</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Quraishi, Um" uniqKey="Quraishi U">UM Quraishi</name></author><author><name sortKey="Abrouk, M" uniqKey="Abrouk M">M Abrouk</name></author><author><name sortKey="Bolot, S" uniqKey="Bolot S">S Bolot</name></author><author><name sortKey="Pont, C" uniqKey="Pont C">C Pont</name></author><author><name sortKey="Throude, M" uniqKey="Throude M">M Throude</name></author><author><name sortKey="Guilhot, N" uniqKey="Guilhot N">N Guilhot</name></author><author><name sortKey="Confolent, C" uniqKey="Confolent C">C Confolent</name></author><author><name sortKey="Bortolini, F" uniqKey="Bortolini F">F Bortolini</name></author><author><name sortKey="Praud, S" uniqKey="Praud S">S Praud</name></author><author><name sortKey="Murigneux, A" uniqKey="Murigneux A">A Murigneux</name></author><author><name sortKey="Charmet, G" uniqKey="Charmet G">G Charmet</name></author><author><name sortKey="Salse, J" uniqKey="Salse J">J Salse</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Reif, Jc" uniqKey="Reif J">JC Reif</name></author><author><name sortKey="Gowda, M" uniqKey="Gowda M">M Gowda</name></author><author><name sortKey="Maurer, Hp" uniqKey="Maurer H">HP Maurer</name></author><author><name sortKey="Longin, Cf" uniqKey="Longin C">CF Longin</name></author><author><name sortKey="Korzun, V" uniqKey="Korzun V">V Korzun</name></author><author><name sortKey="Ebmeyer, E" uniqKey="Ebmeyer E">E Ebmeyer</name></author><author><name sortKey="Bothe, R" uniqKey="Bothe R">R Bothe</name></author><author><name sortKey="Pietsch, C" uniqKey="Pietsch C">C Pietsch</name></author><author><name sortKey="Wurschum, T" uniqKey="Wurschum T">T Würschum</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Riera Lizarazu, O" uniqKey="Riera Lizarazu O">O Riera-Lizarazu</name></author><author><name sortKey="Leonard, Jm" uniqKey="Leonard J">JM Leonard</name></author><author><name sortKey="Tiwari, Vk" uniqKey="Tiwari V">VK Tiwari</name></author><author><name sortKey="Kianian, Sf" uniqKey="Kianian S">SF Kianian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rustenholz, C" uniqKey="Rustenholz C">C Rustenholz</name></author><author><name sortKey="Hedley, Pe" uniqKey="Hedley P">PE Hedley</name></author><author><name sortKey="Morris, J" uniqKey="Morris J">J Morris</name></author><author><name sortKey="Choulet, F" uniqKey="Choulet F">F Choulet</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author><author><name sortKey="Waugh, R" uniqKey="Waugh R">R Waugh</name></author><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rustenholz, C" uniqKey="Rustenholz C">C Rustenholz</name></author><author><name sortKey="Choulet, F" uniqKey="Choulet F">F Choulet</name></author><author><name sortKey="Laugier, C" uniqKey="Laugier C">C Laugier</name></author><author><name sortKey="Safar, J" uniqKey="Safar J">J Safar</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Simkova</name></author><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Dolezel</name></author><author><name sortKey="Magni, F" uniqKey="Magni F">F Magni</name></author><author><name sortKey="Scalabrin, S" uniqKey="Scalabrin S">S Scalabrin</name></author><author><name sortKey="Cattonaro, F" uniqKey="Cattonaro F">F Cattonaro</name></author><author><name sortKey="Vautrin, S" uniqKey="Vautrin S">S Vautrin</name></author><author><name sortKey="Bellec, A" uniqKey="Bellec A">A Bellec</name></author><author><name sortKey="Berges, H" uniqKey="Berges H">H Berges</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Safar, J" uniqKey="Safar J">J Safar</name></author><author><name sortKey="Bartos, J" uniqKey="Bartos J">J Bartos</name></author><author><name sortKey="Janda, J" uniqKey="Janda J">J Janda</name></author><author><name sortKey="Bellec, A" uniqKey="Bellec A">A Bellec</name></author><author><name sortKey="Kubalakova, M" uniqKey="Kubalakova M">M Kubalakova</name></author><author><name sortKey="Valarik, M" uniqKey="Valarik M">M Valarik</name></author><author><name sortKey="Pateyron, S" uniqKey="Pateyron S">S Pateyron</name></author><author><name sortKey="Weiserova, J" uniqKey="Weiserova J">J Weiserova</name></author><author><name sortKey="Tuskova, R" uniqKey="Tuskova R">R Tuskova</name></author><author><name sortKey="Chalkova, J" uniqKey="Chalkova J">J Chalkova</name></author><author><name sortKey="Vrana, J" uniqKey="Vrana J">J Vrana</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Simkova</name></author><author><name sortKey="Faivre Rampant, P" uniqKey="Faivre Rampant P">P Faivre-Rampant</name></author><author><name sortKey="Sourdille, P" uniqKey="Sourdille P">P Sourdille</name></author><author><name sortKey="Caboche, M" uniqKey="Caboche M">M Caboche</name></author><author><name sortKey="Bernard, M" uniqKey="Bernard M">M Bernard</name></author><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Dolezel</name></author><author><name sortKey="Chalhoub, B" uniqKey="Chalhoub B">B Chalhoub</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Saintenac, C" uniqKey="Saintenac C">C Saintenac</name></author><author><name sortKey="Falque, M" uniqKey="Falque M">M Falque</name></author><author><name sortKey="Martin, Oc" uniqKey="Martin O">OC Martin</name></author><author><name sortKey="Paux, E" uniqKey="Paux E">E Paux</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author><author><name sortKey="Sourdille, P" uniqKey="Sourdille P">P Sourdille</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Saintenac, C" uniqKey="Saintenac C">C Saintenac</name></author><author><name sortKey="Jiang, D" uniqKey="Jiang D">D Jiang</name></author><author><name sortKey="Akhunov, Ed" uniqKey="Akhunov E">ED Akhunov</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Salse, J" uniqKey="Salse J">J Salse</name></author><author><name sortKey="Abrouk, M" uniqKey="Abrouk M">M Abrouk</name></author><author><name sortKey="Bolot, S" uniqKey="Bolot S">S Bolot</name></author><author><name sortKey="Guilhot, N" uniqKey="Guilhot N">N Guilhot</name></author><author><name sortKey="Courcelle, E" uniqKey="Courcelle E">E Courcelle</name></author><author><name sortKey="Faraut, T" uniqKey="Faraut T">T Faraut</name></author><author><name sortKey="Waugh, R" uniqKey="Waugh R">R Waugh</name></author><author><name sortKey="Close, Tj" uniqKey="Close T">TJ Close</name></author><author><name sortKey="Messing, J" uniqKey="Messing J">J Messing</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schnable, Ps" uniqKey="Schnable P">PS Schnable</name></author><author><name sortKey="Ware, D" uniqKey="Ware D">D Ware</name></author><author><name sortKey="Fulton, Rs" uniqKey="Fulton R">RS Fulton</name></author><author><name sortKey="Stein, Jc" uniqKey="Stein J">JC Stein</name></author><author><name sortKey="Wei, F" uniqKey="Wei F">F Wei</name></author><author><name sortKey="Pasternak, S" uniqKey="Pasternak S">S Pasternak</name></author><author><name sortKey="Liang, C" uniqKey="Liang C">C Liang</name></author><author><name sortKey="Zhang, J" uniqKey="Zhang J">J Zhang</name></author><author><name sortKey="Fulton, L" uniqKey="Fulton L">L Fulton</name></author><author><name sortKey="Graves, Ta" uniqKey="Graves T">TA Graves</name></author><author><name sortKey="Minx, P" uniqKey="Minx P">P Minx</name></author><author><name sortKey="Reily, Ad" uniqKey="Reily A">AD Reily</name></author><author><name sortKey="Courtney, L" uniqKey="Courtney L">L Courtney</name></author><author><name sortKey="Kruchowski, Ss" uniqKey="Kruchowski S">SS Kruchowski</name></author><author><name sortKey="Tomlinson, C" uniqKey="Tomlinson C">C Tomlinson</name></author><author><name sortKey="Strong, C" uniqKey="Strong C">C Strong</name></author><author><name sortKey="Delehaunty, K" uniqKey="Delehaunty K">K Delehaunty</name></author><author><name sortKey="Fronick, C" uniqKey="Fronick C">C Fronick</name></author><author><name sortKey="Courtney, B" uniqKey="Courtney B">B Courtney</name></author><author><name sortKey="Rock, Sm" uniqKey="Rock S">SM Rock</name></author><author><name sortKey="Belter, E" uniqKey="Belter E">E Belter</name></author><author><name sortKey="Du, F" uniqKey="Du F">F Du</name></author><author><name sortKey="Kim, K" uniqKey="Kim K">K Kim</name></author><author><name sortKey="Abbott, Rm" uniqKey="Abbott R">RM Abbott</name></author><author><name sortKey="Cotton, M" uniqKey="Cotton M">M Cotton</name></author><author><name sortKey="Levy, A" uniqKey="Levy A">A Levy</name></author><author><name sortKey="Marchetto, P" uniqKey="Marchetto P">P Marchetto</name></author><author><name sortKey="Ochoa, K" uniqKey="Ochoa K">K Ochoa</name></author><author><name sortKey="Jackson, Sm" uniqKey="Jackson S">SM Jackson</name></author><author><name sortKey="Gillam, B" uniqKey="Gillam B">B Gillam</name></author><author><name sortKey="Chen, W" uniqKey="Chen W">W Chen</name></author><author><name sortKey="Yan, L" uniqKey="Yan L">L Yan</name></author><author><name sortKey="Higginbotham, J" uniqKey="Higginbotham J">J Higginbotham</name></author><author><name sortKey="Cardenas, M" uniqKey="Cardenas M">M Cardenas</name></author><author><name sortKey="Waligorski, J" uniqKey="Waligorski J">J Waligorski</name></author><author><name sortKey="Applebaum, E" uniqKey="Applebaum E">E Applebaum</name></author><author><name sortKey="Phelps, L" uniqKey="Phelps L">L Phelps</name></author><author><name sortKey="Falcone, J" uniqKey="Falcone J">J Falcone</name></author><author><name sortKey="Kanchi, K" uniqKey="Kanchi K">K Kanchi</name></author><author><name sortKey="Thane, T" uniqKey="Thane T">T Thane</name></author><author><name sortKey="Scimone, A" uniqKey="Scimone A">A Scimone</name></author><author><name sortKey="Thane, N" uniqKey="Thane N">N Thane</name></author><author><name sortKey="Henke, J" uniqKey="Henke J">J Henke</name></author><author><name sortKey="Wang, T" uniqKey="Wang T">T Wang</name></author><author><name sortKey="Ruppert, J" uniqKey="Ruppert J">J Ruppert</name></author><author><name sortKey="Shah, N" uniqKey="Shah N">N Shah</name></author><author><name sortKey="Rotter, K" uniqKey="Rotter K">K Rotter</name></author><author><name sortKey="Hodges, J" uniqKey="Hodges J">J Hodges</name></author><author><name sortKey="Ingenthron, E" uniqKey="Ingenthron E">E Ingenthron</name></author><author><name sortKey="Cordes, M" uniqKey="Cordes M">M Cordes</name></author><author><name sortKey="Kohlberg, S" uniqKey="Kohlberg S">S Kohlberg</name></author><author><name sortKey="Sgro, J" uniqKey="Sgro J">J Sgro</name></author><author><name sortKey="Delgado, B" uniqKey="Delgado B">B Delgado</name></author><author><name sortKey="Mead, K" uniqKey="Mead K">K Mead</name></author><author><name sortKey="Chinwalla, A" uniqKey="Chinwalla A">A Chinwalla</name></author><author><name sortKey="Leonard, S" uniqKey="Leonard S">S Leonard</name></author><author><name sortKey="Crouse, K" uniqKey="Crouse K">K Crouse</name></author><author><name sortKey="Collura, K" uniqKey="Collura K">K Collura</name></author><author><name sortKey="Kudrna, D" uniqKey="Kudrna D">D Kudrna</name></author><author><name sortKey="Currie, J" uniqKey="Currie J">J Currie</name></author><author><name sortKey="He, R" uniqKey="He R">R He</name></author><author><name sortKey="Angelova, A" uniqKey="Angelova A">A Angelova</name></author><author><name sortKey="Rajasekar, S" uniqKey="Rajasekar S">S Rajasekar</name></author><author><name sortKey="Mueller, T" uniqKey="Mueller T">T Mueller</name></author><author><name sortKey="Lomeli, R" uniqKey="Lomeli R">R Lomeli</name></author><author><name sortKey="Scara, G" uniqKey="Scara G">G Scara</name></author><author><name sortKey="Ko, A" uniqKey="Ko A">A Ko</name></author><author><name sortKey="Delaney, K" uniqKey="Delaney K">K Delaney</name></author><author><name sortKey="Wissotski, M" uniqKey="Wissotski M">M Wissotski</name></author><author><name sortKey="Lopez, G" uniqKey="Lopez G">G Lopez</name></author><author><name sortKey="Campos, D" uniqKey="Campos D">D Campos</name></author><author><name sortKey="Braidotti, M" uniqKey="Braidotti M">M Braidotti</name></author><author><name sortKey="Ashley, E" uniqKey="Ashley E">E Ashley</name></author><author><name sortKey="Golser, W" uniqKey="Golser W">W Golser</name></author><author><name sortKey="Kim, H" uniqKey="Kim H">H Kim</name></author><author><name sortKey="Lee, S" uniqKey="Lee S">S Lee</name></author><author><name sortKey="Lin, J" uniqKey="Lin J">J Lin</name></author><author><name sortKey="Dujmic, Z" uniqKey="Dujmic Z">Z Dujmic</name></author><author><name sortKey="Kim, W" uniqKey="Kim W">W Kim</name></author><author><name sortKey="Talag, J" uniqKey="Talag J">J Talag</name></author><author><name sortKey="Zuccolo, A" uniqKey="Zuccolo A">A Zuccolo</name></author><author><name sortKey="Fan, C" uniqKey="Fan C">C Fan</name></author><author><name sortKey="Sebastian, A" uniqKey="Sebastian A">A Sebastian</name></author><author><name sortKey="Kramer, M" uniqKey="Kramer M">M Kramer</name></author><author><name sortKey="Spiegel, L" uniqKey="Spiegel L">L Spiegel</name></author><author><name sortKey="Nascimento, L" uniqKey="Nascimento L">L Nascimento</name></author><author><name sortKey="Zutavern, T" uniqKey="Zutavern T">T Zutavern</name></author><author><name sortKey="Miller, B" uniqKey="Miller B">B Miller</name></author><author><name sortKey="Ambroise, C" uniqKey="Ambroise C">C Ambroise</name></author><author><name sortKey="Muller, S" uniqKey="Muller S">S Muller</name></author><author><name sortKey="Spooner, W" uniqKey="Spooner W">W Spooner</name></author><author><name sortKey="Narechania, A" uniqKey="Narechania A">A Narechania</name></author><author><name sortKey="Ren, L" uniqKey="Ren L">L Ren</name></author><author><name sortKey="Wei, S" uniqKey="Wei S">S Wei</name></author><author><name sortKey="Kumari, S" uniqKey="Kumari S">S Kumari</name></author><author><name sortKey="Faga, B" uniqKey="Faga B">B Faga</name></author><author><name sortKey="Levy, Mj" uniqKey="Levy M">MJ Levy</name></author><author><name sortKey="Mcmahan, L" uniqKey="Mcmahan L">L McMahan</name></author><author><name sortKey="Buren, P" uniqKey="Buren P">P Buren</name></author><author><name sortKey="Vaughn, Mw" uniqKey="Vaughn M">MW Vaughn</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schulte, D" uniqKey="Schulte D">D Schulte</name></author><author><name sortKey="Ariyadasa, R" uniqKey="Ariyadasa R">R Ariyadasa</name></author><author><name sortKey="Shi, B" uniqKey="Shi B">B Shi</name></author><author><name sortKey="Fleury, D" uniqKey="Fleury D">D Fleury</name></author><author><name sortKey="Saski, C" uniqKey="Saski C">C Saski</name></author><author><name sortKey="Atkins, M" uniqKey="Atkins M">M Atkins</name></author><author><name sortKey="Jong, P" uniqKey="Jong P">P Jong</name></author><author><name sortKey="Wu, Cc" uniqKey="Wu C">CC Wu</name></author><author><name sortKey="Graner, A" uniqKey="Graner A">A Graner</name></author><author><name sortKey="Langridge, P" uniqKey="Langridge P">P Langridge</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Soderlund, C" uniqKey="Soderlund C">C Soderlund</name></author><author><name sortKey="Humphray, S" uniqKey="Humphray S">S Humphray</name></author><author><name sortKey="Dunham, A" uniqKey="Dunham A">A Dunham</name></author><author><name sortKey="French, L" uniqKey="French L">L French</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sorrells, Me" uniqKey="Sorrells M">ME Sorrells</name></author><author><name sortKey="Gustafson, Jp" uniqKey="Gustafson J">JP Gustafson</name></author><author><name sortKey="Somers, D" uniqKey="Somers D">D Somers</name></author><author><name sortKey="Chao, S" uniqKey="Chao S">S Chao</name></author><author><name sortKey="Benscher, D" uniqKey="Benscher D">D Benscher</name></author><author><name sortKey="Guedira Brown, G" uniqKey="Guedira Brown G">G Guedira-Brown</name></author><author><name sortKey="Huttner, E" uniqKey="Huttner E">E Huttner</name></author><author><name sortKey="Kilian, A" uniqKey="Kilian A">A Kilian</name></author><author><name sortKey="Mcguire, Pe" uniqKey="Mcguire P">PE McGuire</name></author><author><name sortKey="Ross, K" uniqKey="Ross K">K Ross</name></author><author><name sortKey="Tanaka, J" uniqKey="Tanaka J">J Tanaka</name></author><author><name sortKey="Wenzl, P" uniqKey="Wenzl P">P Wenzl</name></author><author><name sortKey="Williams, K" uniqKey="Williams K">K Williams</name></author><author><name sortKey="Qualset, Co" uniqKey="Qualset C">CO Qualset</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author><author><name sortKey="Graner, A" uniqKey="Graner A">A Graner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sutton, T" uniqKey="Sutton T">T Sutton</name></author><author><name sortKey="Baumann, U" uniqKey="Baumann U">U Baumann</name></author><author><name sortKey="Hayes, J" uniqKey="Hayes J">J Hayes</name></author><author><name sortKey="Collins, Nc" uniqKey="Collins N">NC Collins</name></author><author><name sortKey="Shi, Bj" uniqKey="Shi B">BJ Shi</name></author><author><name sortKey="Schnurbusch, T" uniqKey="Schnurbusch T">T Schnurbusch</name></author><author><name sortKey="Hay, A" uniqKey="Hay A">A Hay</name></author><author><name sortKey="Mayo, G" uniqKey="Mayo G">G Mayo</name></author><author><name sortKey="Pallotta, M" uniqKey="Pallotta M">M Pallotta</name></author><author><name sortKey="Tester, M" uniqKey="Tester M">M Tester</name></author><author><name sortKey="Langridge, P" uniqKey="Langridge P">P Langridge</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Taketa, S" uniqKey="Taketa S">S Taketa</name></author><author><name sortKey="Amano, S" uniqKey="Amano S">S Amano</name></author><author><name sortKey="Tsujino, Y" uniqKey="Tsujino Y">Y Tsujino</name></author><author><name sortKey="Sato, T" uniqKey="Sato T">T Sato</name></author><author><name sortKey="Saisho, D" uniqKey="Saisho D">D Saisho</name></author><author><name sortKey="Kakeda, K" uniqKey="Kakeda K">K Kakeda</name></author><author><name sortKey="Nomura, M" uniqKey="Nomura M">M Nomura</name></author><author><name sortKey="Suzuki, T" uniqKey="Suzuki T">T Suzuki</name></author><author><name sortKey="Matsumoto, T" uniqKey="Matsumoto T">T Matsumoto</name></author><author><name sortKey="Sato, K" uniqKey="Sato K">K Sato</name></author><author><name sortKey="Kanamori, H" uniqKey="Kanamori H">H Kanamori</name></author><author><name sortKey="Kawasaki, S" uniqKey="Kawasaki S">S Kawasaki</name></author><author><name sortKey="Takeda, K" uniqKey="Takeda K">K Takeda</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Talame, V" uniqKey="Talame V">V Talamè</name></author><author><name sortKey="Bovina, R" uniqKey="Bovina R">R Bovina</name></author><author><name sortKey="Sanguineti, Mc" uniqKey="Sanguineti M">MC Sanguineti</name></author><author><name sortKey="Tuberosa, R" uniqKey="Tuberosa R">R Tuberosa</name></author><author><name sortKey="Lundqvist, U" uniqKey="Lundqvist U">U Lundqvist</name></author><author><name sortKey="Salvi, S" uniqKey="Salvi S">S Salvi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tsai, H" uniqKey="Tsai H">H Tsai</name></author><author><name sortKey="Howell, T" uniqKey="Howell T">T Howell</name></author><author><name sortKey="Nitcher, R" uniqKey="Nitcher R">R Nitcher</name></author><author><name sortKey="Missirian, V" uniqKey="Missirian V">V Missirian</name></author><author><name sortKey="Watson, B" uniqKey="Watson B">B Watson</name></author><author><name sortKey="Ngo, Kj" uniqKey="Ngo K">KJ Ngo</name></author><author><name sortKey="Lieberman, M" uniqKey="Lieberman M">M Lieberman</name></author><author><name sortKey="Fass, J" uniqKey="Fass J">J Fass</name></author><author><name sortKey="Uauy, C" uniqKey="Uauy C">C Uauy</name></author><author><name sortKey="Tran, Rk" uniqKey="Tran R">RK Tran</name></author><author><name sortKey="Khan, Aa" uniqKey="Khan A">AA Khan</name></author><author><name sortKey="Filkov, V" uniqKey="Filkov V">V Filkov</name></author><author><name sortKey="Tai, Th" uniqKey="Tai T">TH Tai</name></author><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author><author><name sortKey="Comai, L" uniqKey="Comai L">L Comai</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Turner, A" uniqKey="Turner A">A Turner</name></author><author><name sortKey="Beales, J" uniqKey="Beales J">J Beales</name></author><author><name sortKey="Faure, S" uniqKey="Faure S">S Faure</name></author><author><name sortKey="Dunford, Rp" uniqKey="Dunford R">RP Dunford</name></author><author><name sortKey="Laurie, Da" uniqKey="Laurie D">DA Laurie</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Oeveren, J" uniqKey="Oeveren J">J Oeveren</name></author><author><name sortKey="Ruiter, M" uniqKey="Ruiter M">M Ruiter</name></author><author><name sortKey="Jesse, T" uniqKey="Jesse T">T Jesse</name></author><author><name sortKey="Poel, H" uniqKey="Poel H">H Poel</name></author><author><name sortKey="Tang, Jf" uniqKey="Tang J">JF Tang</name></author><author><name sortKey="Yalcin, F" uniqKey="Yalcin F">F Yalcin</name></author><author><name sortKey="Janssen, A" uniqKey="Janssen A">A Janssen</name></author><author><name sortKey="Volpin, H" uniqKey="Volpin H">H Volpin</name></author><author><name sortKey="Stormo, Ke" uniqKey="Stormo K">KE Stormo</name></author><author><name sortKey="Bogden, R" uniqKey="Bogden R">R Bogden</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wicker, T" uniqKey="Wicker T">T Wicker</name></author><author><name sortKey="Mayer, Kf" uniqKey="Mayer K">KF Mayer</name></author><author><name sortKey="Gundlach, H" uniqKey="Gundlach H">H Gundlach</name></author><author><name sortKey="Martis, M" uniqKey="Martis M">M Martis</name></author><author><name sortKey="Steuernagel, B" uniqKey="Steuernagel B">B Steuernagel</name></author><author><name sortKey="Scholz, U" uniqKey="Scholz U">U Scholz</name></author><author><name sortKey="Simkova, H" uniqKey="Simkova H">H Simková</name></author><author><name sortKey="Kubalakova, M" uniqKey="Kubalakova M">M Kubaláková</name></author><author><name sortKey="Choulet, F" uniqKey="Choulet F">F Choulet</name></author><author><name sortKey="Taudien, S" uniqKey="Taudien S">S Taudien</name></author><author><name sortKey="Platzer, M" uniqKey="Platzer M">M Platzer</name></author><author><name sortKey="Feuillet, C" uniqKey="Feuillet C">C Feuillet</name></author><author><name sortKey="Fahima, T" uniqKey="Fahima T">T Fahima</name></author><author><name sortKey="Budak, H" uniqKey="Budak H">H Budak</name></author><author><name sortKey="Dolezel, J" uniqKey="Dolezel J">J Dolezel</name></author><author><name sortKey="Keller, B" uniqKey="Keller B">B Keller</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Winfield, Mo" uniqKey="Winfield M">MO Winfield</name></author><author><name sortKey="Wilkinson, Pa" uniqKey="Wilkinson P">PA Wilkinson</name></author><author><name sortKey="Allen, Am" uniqKey="Allen A">AM Allen</name></author><author><name sortKey="Barker, Gl" uniqKey="Barker G">GL Barker</name></author><author><name sortKey="Coghill, Ja" uniqKey="Coghill J">JA Coghill</name></author><author><name sortKey="Burridge, A" uniqKey="Burridge A">A Burridge</name></author><author><name sortKey="Hall, A" uniqKey="Hall A">A Hall</name></author><author><name sortKey="Brenchley, Rc" uniqKey="Brenchley R">RC Brenchley</name></author><author><name sortKey="D More, R" uniqKey="D More R">R D’Amore</name></author><author><name sortKey="Hall, N" uniqKey="Hall N">N Hall</name></author><author><name sortKey="Bevan, Mw" uniqKey="Bevan M">MW Bevan</name></author><author><name sortKey="Richmond, T" uniqKey="Richmond T">T Richmond</name></author><author><name sortKey="Gerhardt, Dj" uniqKey="Gerhardt D">DJ Gerhardt</name></author><author><name sortKey="Jeddeloh, Ja" uniqKey="Jeddeloh J">JA Jeddeloh</name></author><author><name sortKey="Edwards, Kj" uniqKey="Edwards K">KJ Edwards</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Xia, Y" uniqKey="Xia Y">Y Xia</name></author><author><name sortKey="Ning, Z" uniqKey="Ning Z">Z Ning</name></author><author><name sortKey="Bai, G" uniqKey="Bai G">G Bai</name></author><author><name sortKey="Li, R" uniqKey="Li R">R Li</name></author><author><name sortKey="Yan, G" uniqKey="Yan G">G Yan</name></author><author><name sortKey="Siddique, Kh" uniqKey="Siddique K">KH Siddique</name></author><author><name sortKey="Baum, M" uniqKey="Baum M">M Baum</name></author><author><name sortKey="Guo, P" uniqKey="Guo P">P Guo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yan, L" uniqKey="Yan L">L Yan</name></author><author><name sortKey="Loukoianov, A" uniqKey="Loukoianov A">A Loukoianov</name></author><author><name sortKey="Tranquilli, G" uniqKey="Tranquilli G">G Tranquilli</name></author><author><name sortKey="Helguera, M" uniqKey="Helguera M">M Helguera</name></author><author><name sortKey="Fahima, T" uniqKey="Fahima T">T Fahima</name></author><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yan, L" uniqKey="Yan L">L Yan</name></author><author><name sortKey="Loukoianov, A" uniqKey="Loukoianov A">A Loukoianov</name></author><author><name sortKey="Blechl, A" uniqKey="Blechl A">A Blechl</name></author><author><name sortKey="Tranquilli, G" uniqKey="Tranquilli G">G Tranquilli</name></author><author><name sortKey="Ramakrishna, W" uniqKey="Ramakrishna W">W Ramakrishna</name></author><author><name sortKey="Sanmiguel, P" uniqKey="Sanmiguel P">P SanMiguel</name></author><author><name sortKey="Bennetzen, Jl" uniqKey="Bennetzen J">JL Bennetzen</name></author><author><name sortKey="Echenique, V" uniqKey="Echenique V">V Echenique</name></author><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yan, L" uniqKey="Yan L">L Yan</name></author><author><name sortKey="Fu, D" uniqKey="Fu D">D Fu</name></author><author><name sortKey="Li, C" uniqKey="Li C">C Li</name></author><author><name sortKey="Blechl, A" uniqKey="Blechl A">A Blechl</name></author><author><name sortKey="Tranquilli, G" uniqKey="Tranquilli G">G Tranquilli</name></author><author><name sortKey="Bonafede, M" uniqKey="Bonafede M">M Bonafede</name></author><author><name sortKey="Sanchez, A" uniqKey="Sanchez A">A Sanchez</name></author><author><name sortKey="Valarik, M" uniqKey="Valarik M">M Valarik</name></author><author><name sortKey="Yasuda, S" uniqKey="Yasuda S">S Yasuda</name></author><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yoshida, T" uniqKey="Yoshida T">T Yoshida</name></author><author><name sortKey="Nishida, H" uniqKey="Nishida H">H Nishida</name></author><author><name sortKey="Zhu, J" uniqKey="Zhu J">J Zhu</name></author><author><name sortKey="Nitcher, R" uniqKey="Nitcher R">R Nitcher</name></author><author><name sortKey="Distelfeld, A" uniqKey="Distelfeld A">A Distelfeld</name></author><author><name sortKey="Akashi, Y" uniqKey="Akashi Y">Y Akashi</name></author><author><name sortKey="Kato, K" uniqKey="Kato K">K Kato</name></author><author><name sortKey="Dubcovsky, J" uniqKey="Dubcovsky J">J Dubcovsky</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yuo, T" uniqKey="Yuo T">T Yuo</name></author><author><name sortKey="Yamashita, Y" uniqKey="Yamashita Y">Y Yamashita</name></author><author><name sortKey="Kanamori, H" uniqKey="Kanamori H">H Kanamori</name></author><author><name sortKey="Matsumoto, T" uniqKey="Matsumoto T">T Matsumoto</name></author><author><name sortKey="Lundqvist, U" uniqKey="Lundqvist U">U Lundqvist</name></author><author><name sortKey="Sato, K" uniqKey="Sato K">K Sato</name></author><author><name sortKey="Ichii, M" uniqKey="Ichii M">M Ichii</name></author><author><name sortKey="Jobling, Sa" uniqKey="Jobling S">SA Jobling</name></author><author><name sortKey="Taketa, S" uniqKey="Taketa S">S Taketa</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhang, H" uniqKey="Zhang H">H Zhang</name></author><author><name sortKey="Sreenivasulu, N" uniqKey="Sreenivasulu N">N Sreenivasulu</name></author><author><name sortKey="Weschke, W" uniqKey="Weschke W">W Weschke</name></author><author><name sortKey="Stein, N" uniqKey="Stein N">N Stein</name></author><author><name sortKey="Rudd, S" uniqKey="Rudd S">S Rudd</name></author><author><name sortKey="Radchuk, V" uniqKey="Radchuk V">V Radchuk</name></author><author><name sortKey="Potokina, E" uniqKey="Potokina E">E Potokina</name></author><author><name sortKey="Scholz, U" uniqKey="Scholz U">U Scholz</name></author><author><name sortKey="Schweizer, P" uniqKey="Schweizer P">P Schweizer</name></author><author><name sortKey="Zierold, U" uniqKey="Zierold U">U Zierold</name></author><author><name sortKey="Langridge, P" uniqKey="Langridge P">P Langridge</name></author><author><name sortKey="Varshney, Rk" uniqKey="Varshney R">RK Varshney</name></author><author><name sortKey="Wobus, U" uniqKey="Wobus U">U Wobus</name></author><author><name sortKey="Graner, A" uniqKey="Graner A">A Graner</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhang, G" uniqKey="Zhang G">G Zhang</name></author><author><name sortKey="Liu, X" uniqKey="Liu X">X Liu</name></author><author><name sortKey="Quan, Z" uniqKey="Quan Z">Z Quan</name></author><author><name sortKey="Cheng, S" uniqKey="Cheng S">S Cheng</name></author><author><name sortKey="Xu, X" uniqKey="Xu X">X Xu</name></author><author><name sortKey="Pan, S" uniqKey="Pan S">S Pan</name></author><author><name sortKey="Xie, M" uniqKey="Xie M">M Xie</name></author><author><name sortKey="Zeng, P" uniqKey="Zeng P">P Zeng</name></author><author><name sortKey="Yue, Z" uniqKey="Yue Z">Z Yue</name></author><author><name sortKey="Wang, W" uniqKey="Wang W">W Wang</name></author><author><name sortKey="Tao, Y" uniqKey="Tao Y">Y Tao</name></author><author><name sortKey="Bian, C" uniqKey="Bian C">C Bian</name></author><author><name sortKey="Han, C" uniqKey="Han C">C Han</name></author><author><name sortKey="Xia, Q" uniqKey="Xia Q">Q Xia</name></author><author><name sortKey="Peng, X" uniqKey="Peng X">X Peng</name></author><author><name sortKey="Cao, R" uniqKey="Cao R">R Cao</name></author><author><name sortKey="Yang, X" uniqKey="Yang X">X Yang</name></author><author><name sortKey="Zhan, D" uniqKey="Zhan D">D Zhan</name></author><author><name sortKey="Hu, J" uniqKey="Hu J">J Hu</name></author><author><name sortKey="Zhang, Y" uniqKey="Zhang Y">Y Zhang</name></author><author><name sortKey="Li, H" uniqKey="Li H">H Li</name></author><author><name sortKey="Li, H" uniqKey="Li H">H Li</name></author><author><name sortKey="Li, N" uniqKey="Li N">N Li</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author><author><name sortKey="Wang, C" uniqKey="Wang C">C Wang</name></author><author><name sortKey="Wang, R" uniqKey="Wang R">R Wang</name></author><author><name sortKey="Guo, T" uniqKey="Guo T">T Guo</name></author><author><name sortKey="Cai, Y" uniqKey="Cai Y">Y Cai</name></author><author><name sortKey="Liu, C" uniqKey="Liu C">C Liu</name></author><author><name sortKey="Xiang, H" uniqKey="Xiang H">H Xiang</name></author><author><name sortKey="Shi, Q" uniqKey="Shi Q">Q Shi</name></author><author><name sortKey="Huang, P" uniqKey="Huang P">P Huang</name></author><author><name sortKey="Chen, Q" uniqKey="Chen Q">Q Chen</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y Li</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author><author><name sortKey="Zhao, Z" uniqKey="Zhao Z">Z Zhao</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author></analytic></biblStruct></listBibl></div1></back></TEI><pmc article-type="review-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Funct Integr Genomics</journal-id><journal-id journal-id-type="iso-abbrev">Funct. Integr. Genomics</journal-id><journal-title-group><journal-title>Functional & Integrative Genomics</journal-title></journal-title-group><issn pub-type="ppub">1438-793X</issn><issn pub-type="epub">1438-7948</issn><publisher><publisher-name>Springer-Verlag</publisher-name><publisher-loc>Berlin/Heidelberg</publisher-loc></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">23161406</article-id><article-id pub-id-type="pmc">3508266</article-id><article-id pub-id-type="publisher-id">300</article-id><article-id pub-id-type="doi">10.1007/s10142-012-0300-5</article-id><article-categories><subj-group subj-group-type="heading"><subject>Review</subject></subj-group></article-categories><title-group><article-title>Integrating cereal genomics to support innovation in the Triticeae</article-title></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name><surname>Feuillet</surname><given-names>C.</given-names></name><address><email>catherine.feuillet@clermont.inra.fr</email></address><xref ref-type="aff" rid="Aff1">1</xref></contrib><contrib contrib-type="author"><name><surname>Stein</surname><given-names>N.</given-names></name><xref ref-type="aff" rid="Aff2">2</xref></contrib><contrib contrib-type="author"><name><surname>Rossini</surname><given-names>L.</given-names></name><xref ref-type="aff" rid="Aff3">3</xref></contrib><contrib contrib-type="author"><name><surname>Praud</surname><given-names>S.</given-names></name><xref ref-type="aff" rid="Aff4">4</xref></contrib><contrib contrib-type="author"><name><surname>Mayer</surname><given-names>K.</given-names></name><xref ref-type="aff" rid="Aff5">5</xref></contrib><contrib contrib-type="author"><name><surname>Schulman</surname><given-names>A.</given-names></name><xref ref-type="aff" rid="Aff6">6</xref><xref ref-type="aff" rid="Aff7">7</xref></contrib><contrib contrib-type="author"><name><surname>Eversole</surname><given-names>K.</given-names></name><xref ref-type="aff" rid="Aff8">8</xref></contrib><contrib contrib-type="author"><name><surname>Appels</surname><given-names>R.</given-names></name><xref ref-type="aff" rid="Aff9">9</xref></contrib><aff id="Aff1"><label>1</label>INRA-UBP UMR 1095 Genetics and Diversity of Cereals, Clermont-Ferrand, France</aff><aff id="Aff2"><label>2</label>Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany</aff><aff id="Aff3"><label>3</label>Dipartimento di Produzione Vegetale, Università degli Studi di Milano, Milan, Italy</aff><aff id="Aff4"><label>4</label>Biogemma, Site de la Garenne, 90126 Chappes, France</aff><aff id="Aff5"><label>5</label>Munich Information Center for Protein Sequences/Institute for Bioinformatics and Systems Biology, Helmholtz Center Munich, Neuherberg, Germany</aff><aff id="Aff6"><label>6</label>MTT/BI Institute of Biotechnology, University of Helsinki, Helsinki, Finland</aff><aff id="Aff7"><label>7</label>Plant Genomics Laboratory, MTT Agrifood Research, Jokioinen, Finland</aff><aff id="Aff8"><label>8</label>Eversole Associates, Wyoming Road, 5207 Bethesda, USA</aff><aff id="Aff9"><label>9</label>Center for Comparative Genomics, Murdoch University, Perth, WA 6150 Australia</aff></contrib-group><pub-date pub-type="epub"><day>17</day><month>11</month><year>2012</year></pub-date><pub-date pub-type="pmc-release"><day>17</day><month>11</month><year>2012</year></pub-date><pub-date pub-type="ppub"><month>11</month><year>2012</year></pub-date><volume>12</volume><issue>4</issue><fpage>573</fpage><lpage>583</lpage><history><date date-type="received"><day>29</day><month>10</month><year>2012</year></date><date date-type="accepted"><day>31</day><month>10</month><year>2012</year></date></history><permissions><copyright-statement>© The Author(s) 2012</copyright-statement></permissions><abstract id="Abs1"><p>The genomic resources of small grain cereals that include some of the most important crop species such as wheat, barley, and rye are attaining a level of completion that now is contributing to new structural and functional studies as well as refining molecular marker development and mapping strategies for increasing the efficiency of breeding processes. The integration of new efforts to obtain reference sequences in bread wheat and barley, in particular, is accelerating the acquisition and interpretation of genome-level analyses in both of these major crops.</p></abstract><kwd-group xml:lang="en"><title>Keywords</title><kwd>Genetics</kwd><kwd>Genomics</kwd><kwd>Map-based cloning</kwd><kwd>Molecular breeding</kwd><kwd>Comparative genomics</kwd><kwd>Bioinformatics</kwd><kwd>Physical mapping</kwd><kwd>Wheat</kwd><kwd>Barley</kwd><kwd>Triticeae</kwd></kwd-group><custom-meta-group><custom-meta><meta-name>issue-copyright-statement</meta-name><meta-value>© Springer-Verlag Berlin Heidelberg 2012</meta-value></custom-meta></custom-meta-group></article-meta></front><body><sec id="Sec1" sec-type="introduction"><title>Introduction</title><p>For many years, the size and complexity of the Triticeae genomes, namely, wheat (17Gb, hexaploid), barley (5Gb, diploid), and rye (8Gb, diploid), have hampered the development of genomics and its application to breed crops with improved composition and characteristics designed to satisfy the needs of consumers, processors, and producers. Despite the recognition that a reference genome sequence is key to accelerating crop improvement, the Triticeae are the last major crops for which a complete genome sequence is not available (Feuillet and Eversole <xref ref-type="bibr" rid="CR36">2007</xref>). Thus, the establishment of genome sequence enabled technology platforms for the Triticeae has lagged behind advances in other cereal crops such as corn and rice. In the past decade, however, extensive efforts to develop whole-genome and chromosome-specific bacterial artificial chromosome (BAC) libraries (Allouis et al. <xref ref-type="bibr" rid="CR2">2003</xref>; Safar et al. <xref ref-type="bibr" rid="CR80">2004</xref>), extensive EST collections (ITEC <ext-link ext-link-type="uri" xlink:href="http://avena.pw.usda.gov/genome/">http://avena.pw.usda.gov/genome/</ext-link>; Lazo et al. <xref ref-type="bibr" rid="CR57">2004</xref>; Zhang et al. <xref ref-type="bibr" rid="CR104">2004</xref>), transformation systems, wild germplasm and mutant collections, as well as DNA chips have permitted the establishment of large-scale genomics resources and research programs aimed at enabling high-quality sequencing of the Triticeae genomes. Given their complexity, in particular that of the hexaploid wheat genome, physical maps must be established as a scaffold for sequence assembly as it is simply not possible to achieve a reference genome sequence using whole genome shotgun approaches (Feuillet et al. <xref ref-type="bibr" rid="CR37">2011</xref>; Ariyadasa and Stein <xref ref-type="bibr" rid="CR4">2012</xref>). In the past 4 years, a number of initiatives such as the International Wheat Genome Sequencing Consortium (<ext-link ext-link-type="uri" xlink:href="http://www.wheatgenome.org">www.wheatgenome.org</ext-link>; Feuillet and Eversole <xref ref-type="bibr" rid="CR36">2007</xref>), the International Barley Sequencing Consortium (<ext-link ext-link-type="uri" xlink:href="http://www.barleygenome.org">www.barleygenome.org</ext-link>), the UK wheat consortium (<ext-link ext-link-type="uri" xlink:href="http://www.wheatbp.net/WheatBP/Documents/DOC_Research.php">http://www.wheatbp.net/WheatBP/Documents/DOC_Research.php</ext-link>), and the European <italic>TriticeaeGenome</italic> FP7 project (<ext-link ext-link-type="uri" xlink:href="http://www.triticeaegenome.eu">www.triticeaegenome.eu</ext-link>) have developed a suite of genomic resources and knowledge to provide the foundation for physical mapping and sequencing the wheat and barley genomes. Before the development of these resources, map-based cloning was quite laborious and time-consuming, and consequently, only a few genes have been isolated in the Triticeae (Büschges et al. <xref ref-type="bibr" rid="CR17">1997</xref>; Brueggeman et al. <xref ref-type="bibr" rid="CR14">2002</xref>; <xref ref-type="bibr" rid="CR15">2008</xref>; Huang et al. <xref ref-type="bibr" rid="CR46">2003</xref>; Yan et al. <xref ref-type="bibr" rid="CR99">2003</xref>; Charles et al. <xref ref-type="bibr" rid="CR21">2009</xref>; Fu et al. <xref ref-type="bibr" rid="CR40">2009</xref>; Turner et al. <xref ref-type="bibr" rid="CR94">2005</xref>; Komatsuda et al. <xref ref-type="bibr" rid="CR53">2007</xref>; Taketa et al. <xref ref-type="bibr" rid="CR91">2008</xref>; Nair et al. <xref ref-type="bibr" rid="CR68">2010</xref>; Faris et al. <xref ref-type="bibr" rid="CR35">2010</xref>; Breen et al. <xref ref-type="bibr" rid="CR12">2010a</xref>; Bulgarelli et al. <xref ref-type="bibr" rid="CR16">2010</xref>; Yuo et al. <xref ref-type="bibr" rid="CR103">2012</xref>; for reviews see Stein and Graner <xref ref-type="bibr" rid="CR89">2004</xref> and Krattinger et al. <xref ref-type="bibr" rid="CR54">2009</xref>). This was due in part to the challenge of walking efficiently along the chromosomes in repetitive sequence regions with the difficulty of identifying unique probes for screening BAC libraries. With more than 80 % of the sequence identified as transposable elements, the issues are acute in the Triticeae genomes, although the deployment of markers that cross the often unique boundaries between repetitive elements has reduced the problem to some degree (Flavell et al. <xref ref-type="bibr" rid="CR38">1998</xref>; Paux et al. <xref ref-type="bibr" rid="CR71">2010</xref>). With physical maps in hand, chromosome walking is no longer necessary and, assuming the genetic resolution is high enough, physical maps enable direct landing at the target site thereby enabling more efficient gene cloning.</p><p>In the absence of complete genome sequences and given the relatively high gene order conservation (collinearity) observed in the grass genomes, genomics studies in the Triticeae have utilized comparative genomics approaches with other grass genomes. To date, five genomes relevant to the Triticeae have been sequenced, namely rice, <italic>Brachypodium</italic>, sorghum, maize, and foxtail millet (IRGSP <xref ref-type="bibr" rid="CR51">2005</xref>; IBI <xref ref-type="bibr" rid="CR50">2010</xref>; Paterson et al. <xref ref-type="bibr" rid="CR69">2009</xref>; Schnable et al. <xref ref-type="bibr" rid="CR85">2009</xref>; Bennetzen et al. <xref ref-type="bibr" rid="CR6">2012</xref>; Zhang et al. <xref ref-type="bibr" rid="CR105">2012</xref>). Comparisons between these different genomes enable the identification of conserved gene regions that can support molecular marker design and identify candidate genes for traits that are well conserved between species. Hence, the high-quality rice genome sequence (IRGSP <xref ref-type="bibr" rid="CR51">2005</xref>) combined with the sequences of a number of genomes from the other grasses (<italic>Brachypodium</italic>, sorghum, maize) was used to develop molecular markers such as the Conserved Orthologous Set (COS) molecular markers (Bertin et al. <xref ref-type="bibr" rid="CR9">2005</xref>; Quraishi et al. <xref ref-type="bibr" rid="CR75">2009</xref>) and to accelerate discovery of wheat and barley genes (Fu et al. <xref ref-type="bibr" rid="CR40">2009</xref>; Breen and Bellgard <xref ref-type="bibr" rid="CR11">2010</xref>; Rustenholz et al. <xref ref-type="bibr" rid="CR78">2010</xref>; Krattinger et al. <xref ref-type="bibr" rid="CR55">2011</xref>; Distelfeld et al. <xref ref-type="bibr" rid="CR28">2012</xref>). However, genes such as very recently duplicated genes and those involved in end use quality (for example bread, pasta), rapidly evolving genes such as disease resistance genes, as well as genes involved in large regulatory networks are more species-specific, and thus, it is crucial to have access to genomic resources and a reference sequence of the target genome.</p></sec><sec id="Sec2"><title>Establishment of genome resources for physical mapping in the Triticeae</title><p>While for barley, whole genome BAC libraries have been produced (Schulte et al. <xref ref-type="bibr" rid="CR86">2011</xref>), the generation of BAC clones from flow-sorted chromosomes (Safar et al. <xref ref-type="bibr" rid="CR80">2004</xref>; Šafář et al. <xref ref-type="bibr" rid="CR81">2010</xref>) and chromosome arms (reviewed in Dolezel et al. <xref ref-type="bibr" rid="CR30">2012</xref>) has been key to reducing the complexity of the hexaploid wheat genome analyses. Typically, libraries of 30,000–90,000 BAC clones are generated from the flow sorting of approximately a million chromosomes (<ext-link ext-link-type="uri" xlink:href="http://olomouc.ueb.cas.cz/dna-libraries/cereals">http://olomouc.ueb.cas.cz/dna-libraries/cereals</ext-link>) to give a coverage of over 10× for the predicted chromosome size (Dolezel et al. <xref ref-type="bibr" rid="CR29">2007</xref>). The BAC libraries are then fingerprinted using SnapShot labelling and analysis (Luo et al. <xref ref-type="bibr" rid="CR61">2003</xref>), using five restriction endonucleases, and BAC contigs are assembled generally using the FingerPrinted Contig (FPC) software (Soderlund et al. <xref ref-type="bibr" rid="CR87">2000</xref>). Although efficient guidelines and methodologies were established (Appels et al. <xref ref-type="bibr" rid="CR3">2010</xref>) and good results were obtained in wheat, as exemplified by the construction of the first physical map of the 1Gb wheat chromosome 3B (Paux et al. <xref ref-type="bibr" rid="CR70">2008</xref>), the length of the physical contigs was slightly lower than in small model genomes. Sequencing BAC contigs (Choulet et al. <xref ref-type="bibr" rid="CR22">2010</xref>) revealed a number of systematic errors in the FPC assemblies. In fact, due to the high level of repetitive DNA in the Triticeae genomes, very stringent criteria must be used to ensure a reliable assembly with the FPC software. This, in turn, often results in short contig lengths as well as an unreliable assembly in some difficult regions. To address these problems, Frenkel et al. (<xref ref-type="bibr" rid="CR39">2010</xref>) developed a novel algorithm called Linear Topology Contig (LTC). The LTC algorithm reduces the rate of false connections and Q-clones by systematically exploring the topological contig structure and performing iterative clone clustering and ordering so that highly reliable and contigs longer than in FPC are recovered. The LTC detects “weak” connections in contigs obtained by FPC and through iterative steps undertakes their “repair.”</p><p>A further improvement in the reliability of physical map construction can be obtained using the power of next-generation sequencing technologies. KeyGene (<ext-link ext-link-type="uri" xlink:href="http://www.keygene.com">www.keygene.com</ext-link>) recently developed a new approach called Whole Genome Profiling (WGP, van Oeveren et al. <xref ref-type="bibr" rid="CR95">2011</xref>) that is based on the sequencing of the ends of restriction endonuclease fragments after digestion of BAC pools. The application of WGP to a subset of the wheat chromosome 3B physical map (Philippe et al. <xref ref-type="bibr" rid="CR73">2012</xref>) demonstrated that this is a viable approach for a complex genome such as wheat and that it reduces the amount of chimeric and misassembled clones compared to the SNAPshot method while providing sequence tag information that can be used to support pooling strategies for sequencing. Thus, robust methodologies and protocols are now in place for assembling reliable physical maps in the Triticeae genomes.</p></sec><sec id="Sec3"><title>Construction of anchored physical maps</title><p>The full potential of physical maps in supporting map-based cloning and marker development for breeding can only be achieved when the BAC contigs are linked sufficiently to genetic and phenotypic maps. Thus, once physical maps have been assembled, it is essential that the BAC contigs are anchored at high density with molecular markers. This requires the development of thousands of markers followed by their assignation to the genetic and physical maps. In the Triticeae, large collaborative efforts have been deployed in the past 15 years to develop EST and SSR markers for genetic mapping enabling the construction of genetic maps that carry several hundreds of markers (<ext-link ext-link-type="uri" xlink:href="http://wheat.pw.usda.gov/GG2/index.shtml">wheat.pw.usda.gov/GG2/index.shtml</ext-link>). However, it is only with the advent of NGS technologies that high throughput development and genotyping of SNP markers progressed to a significant degree in wheat and barley. This has opened up new perspectives in anchoring strategies (Sorrells et al. <xref ref-type="bibr" rid="CR88">2011</xref>; Paux et al. <xref ref-type="bibr" rid="CR72">2012</xref>; Allen et al. <xref ref-type="bibr" rid="CR1">2011</xref>; Poland et al. <xref ref-type="bibr" rid="CR74">2012</xref>). The deployment of KASpar-based assays for SNPs in wheat provided the basis for a map of Avalon × Cadenza with 2,923 SNPs (Allen et al. <xref ref-type="bibr" rid="CR1">2011</xref>) and Savannah × Rialto with 1,412 SNPs (http//<ext-link ext-link-type="uri" xlink:href="http://www.wheatisp.org">www.wheatisp.org</ext-link>). Recently, large transcriptome sequencing and resequencing efforts in Australia and the USA enabled the development of a 9K Infinium wheat SNP-chip (Akunov, personal communication). In barley, comprehensive sets of several thousands of SNP markers have been successfully developed and mapped in numerous populations (Close et al. <xref ref-type="bibr" rid="CR24">2009</xref>; Muñoz-Amatriaín et al. <xref ref-type="bibr" rid="CR67">2011</xref>; Comadran et al. <xref ref-type="bibr" rid="CR26">2012</xref>). With additional gene-based SNP datasets originating from programs in the UK (<ext-link ext-link-type="uri" xlink:href="http://www.wheatisp.org">http://www.wheatisp.org</ext-link>; Allen et al. <xref ref-type="bibr" rid="CR1">2011</xref>) and from 5,000 COS-SNPs designed in the <italic>TriticeaeGenome</italic> project, a 90K SNP-chip is currently under design and should be available in the near future (Akhunov, personal communication). Focusing on the transcriptome enables a reduction in complexity that also can be achieved by the digestion of genomic DNA with restriction enzymes and sequencing of selected fragments. Genotyping by sequencing (GBS) technologies, developed originally in maize, have been applied to wheat and barley (Elshire et al. <xref ref-type="bibr" rid="CR34">2011</xref>; Poland et al. <xref ref-type="bibr" rid="CR74">2012</xref>) thereby providing another platform for DNA sequence-based ordering of reference points along the Triticeae genomes. With this approach, 34,396 SNPs were mapped by GBS in the Oregon Wolfe barley reference population, while 19,720 SNPs were mapped in the synthetic W97846 × Opata85 reference wheat population. Because they rely on sequence information, the SNP- and GBS-based approaches provide thousands of sequence tags that can be integrated into physical maps in silico thereby increasing the efficiency of anchoring strategies. This more direct integration of BAC sequencing and anchoring to genetic maps was carried out successfully in the rice genome sequencing program using BAC-end sequences (reviewed in Ariyadasa and Stein <xref ref-type="bibr" rid="CR4">2012</xref>), and it is currently being applied in wheat and barley (IBSC <xref ref-type="bibr" rid="CR49">2012</xref>). The in silico, sequence-based anchoring complements the well-established process of identifying known molecular markers in BAC pools using PCR (Paux et al. <xref ref-type="bibr" rid="CR70">2008</xref>) as well as the broad range of hybridization array technologies that are available (reviewed in Ariyadasa and Stein <xref ref-type="bibr" rid="CR4">2012</xref>).</p><p>Genetic mapping in the Triticeae genomes is difficult partly as a result of the very low rate of recombination observed in the centromeric and pericentromeric regions that can represent up to one half of an entire chromosome (Birchler et al. <xref ref-type="bibr" rid="CR10">2009</xref>; Kanisay and Dawe <xref ref-type="bibr" rid="CR52">2009</xref>). On wheat chromosome 3B, it was estimated that 90 % of crossing over occur in only 40 % of the chromosome, mostly in the telomeric regions, whereas 27 % of the chromosome did not show any crossing over (Saintenac et al. <xref ref-type="bibr" rid="CR82">2009</xref>). In the recombinogenic regions, sufficient resolution in ordering physical contigs to genetic maps using molecular markers can be obtained when utilizing mapping populations with high recombination frequencies. This can be achieved using recombinant inbred line (RIL) populations of several thousand individuals. Two populations of 2,600 and 4,000 RILs have been produced for this purpose in wheat (Renan × Chinese Spring) and barley (Barke × Morex), respectively, in the <italic>TriticeaeGenome</italic> project with the rationale of using parents that are the references for genome sequencing and physical mapping, i.e., Chinese Spring in wheat and Morex in barley. This complements the continued efforts of the International Triticeae Mapping Initiative to develop a reference population for genetic mapping in wheat using a cross between the synthetic wheat W7984 × Opata M85 population. A new population of 2,039 RILs has been established recently with a core set of 42 SSR markers used to genotype the lines and facilitate a community-base effort to build a detailed map (Sorrells et al. <xref ref-type="bibr" rid="CR88">2011</xref>). In addition, Sorrells et al. (<xref ref-type="bibr" rid="CR88">2011</xref>) reported 215 doubled haploid lines that were genotyped with 1,446 molecular markers. Furthermore, multi-parent advanced generation intercross populations originating from multiple founder lines (typically 8 to 16) and therefore relying on a larger diversity and amount of recombination events than bi-parental populations have been established in wheat (Mackay and Powell <xref ref-type="bibr" rid="CR62">2007</xref>; Huang et al. <xref ref-type="bibr" rid="CR47">2012</xref>). These are currently being tested for anchoring physical maps in different projects.</p><p>In the regions near the centromeres or within large blocks of heterochromatin where little if any recombination occurs, it is not possible to reliably anchor and order a physical map. Targeting these regions is important, however, as it is now clear that genes are present all along the physical maps (Choulet et al. <xref ref-type="bibr" rid="CR22">2010</xref>; Rustenholz et al. <xref ref-type="bibr" rid="CR79">2011</xref>), including in BAC clones assigned to the centromeres and to retrotransposable element-rich regions of chromosomes. Genes, including the important vernalisation gene <italic>Vrn-D4</italic>, have been mapped to the centromere region (Yoshida et al. <xref ref-type="bibr" rid="CR102">2010</xref>). In another study, the characterization of a 0.8-Mb DNA segment from chromosome 3B that was composed almost entirely of transposable elements except for a small gene island of three conserved genes (Breen et al. <xref ref-type="bibr" rid="CR13">2010b</xref>). Thus, an alternative strategy for targeting centromeres and other repetitive sequence-rich regions of the chromosomes where recombination is low has been established following radiation hybrid mapping approaches that are widely used in animal genetics. Radiation hybrid mapping relies on assaying radiation-induced chromosomal fragments with molecular markers defined by the physical map under study (Riera-Lizarazu et al. <xref ref-type="bibr" rid="CR77">2010</xref>). The frequency of markers remaining together on the same chromosome fragment defines a measure of how physically close the markers are to each other. RH mapping was evaluated during the construction of the 3B physical map using a panel of 184 RH lines tested with 65 ISBP markers. A resolution of approximately 263 kb per break was observed (Paux et al. <xref ref-type="bibr" rid="CR70">2008</xref>). In particular, for the terminal bin of chromosome 3BL (3BL7-0.63-1.00), 35 loci corresponding to 32 loci were ordered and confirmed the physical map established using markers ordered by standard recombination-based mapping (Paux et al. <xref ref-type="bibr" rid="CR70">2008</xref>). More recently, the same panel was used to establish a high density RH map with 541 marker loci anchored to chromosome 3B spanning a total distance of 1871.9 cR (Kumar et al. <xref ref-type="bibr" rid="CR56">2012</xref>).</p><p>The observations on the existence of a core set of coding genes that is conserved among the grass genomes (Salse et al. <xref ref-type="bibr" rid="CR84">2009</xref>) have also provided a basis for anchoring chromosome (arm) specific DNA sequences to genetic and physical maps (Mayer et al. <xref ref-type="bibr" rid="CR63">2009</xref>; Berkman et al. <xref ref-type="bibr" rid="CR7">2011</xref>; Berkman et al. <xref ref-type="bibr" rid="CR8">2012</xref>). The so-called chromosome zipper approach was developed originally in barley to determine a virtual order of genes using inference of synteny information along the grass genomes (Mayer et al. <xref ref-type="bibr" rid="CR63">2009</xref>, <xref ref-type="bibr" rid="CR64">2011</xref>). Incorporation of chromosome arm-specific microarray hybridization information is providing an important cross-reference for the positioning of genes in this framework. In addition, cross-referencing to BAC clones that contain particular genes identified by DNA hybridisation helps in ordering BAC and FPC contigs. Typically 4,000–9,000 genic sequences per chromosome are found for wheat chromosomes, with some likely to represent gene fragments and pseudogenes (Choulet et al. <xref ref-type="bibr" rid="CR22">2010</xref>; Wicker et al. <xref ref-type="bibr" rid="CR96">2011</xref>). Following their identification, genes conserved between wheat, <italic>Brachypodium</italic>, rice, sorghum, and barley (Hernandez et al. <xref ref-type="bibr" rid="CR44">2012</xref>) can then be clustered into syntenic groups and, along with dense genetic marker information, used to define an estimated gene order in wheat and barley. The analysis also identifies predicted genes that may be unique to wheat and barley and thus might be significant in accounting for the specific agronomic attributes of these crops.</p><p>High throughput hybridization platforms can be used for anchoring physical maps if arrays of mapped markers are hybridized to labelled pools of BACs (Rustenholz et al. <xref ref-type="bibr" rid="CR78">2010</xref>; Hui et al. <xref ref-type="bibr" rid="CR48">2011</xref>; Ariyadasa and Stein <xref ref-type="bibr" rid="CR4">2012</xref>). The hybridization of DNA from complex genomes to microarrays with long oligonucleotides that assay different clusters of multiple SNPs, small deletion/insertion differences, copy number variants, and presence/absence variation in genomic DNA rather than single SNPs have also been used to assay polymorphisms for genotyping (Fu et al. <xref ref-type="bibr" rid="CR41">2010</xref>). In the case of chromosome 3B, pools of BACs were hybridised to a barley Agilent 15 K expression microarray and allowed 738 barley orthologous genes to be located to their respective BAC clones (Rustenholz et al. <xref ref-type="bibr" rid="CR78">2010</xref>). The study showed that 68 % of the genes identified in the study were syntenic between wheat chromosome 3B and barley 3H.</p></sec><sec id="Sec4"><title>Comparative genomics reveals unique features of the Triticeae genomes</title><p>Analyses of the grass genomes have pioneered the field of comparative genomics in plants. Early analyses of ribosomal DNA loci in the Triticeae (Dubcovsky and Dvorak <xref ref-type="bibr" rid="CR32">1995</xref>) indicated that despite a good conservation between the genomes, specific rearrangements occurred. Indications for this conclusion were already evident in BAC sequencing and comparison during map-based cloning projects. More recently, the construction of physical maps and whole chromosome analyses demonstrated that 30–40 % of the gene complements in wheat and barley do not reside in the conserved syntenic gene order space (Choulet et al. <xref ref-type="bibr" rid="CR22">2010</xref>; Mayer et al. <xref ref-type="bibr" rid="CR64">2011</xref>; Wicker et al. <xref ref-type="bibr" rid="CR96">2011</xref>; Berkman et al. <xref ref-type="bibr" rid="CR8">2012</xref>).</p><p>Rearrangements including deletions and expansions in the genomes of wheat have been frequent (Dubcovsky and Dvorak <xref ref-type="bibr" rid="CR33">2007</xref>; Wicker et al. <xref ref-type="bibr" rid="CR96">2011</xref>) and are considered to be the result of waves of retrotransposable elements’ movements assumed to have occurred in the recent evolutionary history of wheat (Charles et al. <xref ref-type="bibr" rid="CR20">2008</xref>; Choulet et al. <xref ref-type="bibr" rid="CR22">2010</xref>). In the case of the rDNA loci in the Triticeae, a further variable includes amplification events that increase the number of tandem copies of the genes at a given locus (Dubcovsky and Dvorak <xref ref-type="bibr" rid="CR32">1995</xref>). Additional mechanisms for rearrangements suggested by Wicker et al. (<xref ref-type="bibr" rid="CR96">2011</xref>) include the repair of double-strand breaks in DNA which can include a DNA segment (plus or minus a gene sequence) from elsewhere in the genome. Although Wicker et al. (<xref ref-type="bibr" rid="CR96">2011</xref>) argued that pseudogenes mostly arise from genome rearrangements, unique gene-domain fusions have been reported to be important in generating a gene that confers temperature-dependent resistance to wheat stripe rust wheat (Fu et al. <xref ref-type="bibr" rid="CR40">2009</xref>) and sensitivity to the tan spot pathogen (Faris et al. <xref ref-type="bibr" rid="CR35">2010</xref>). In both of these examples, protein kinase domains were fused with domains that could be recognized as being important in disease resistance gene networks.</p><p>The instability of the wheat genome was dramatically illustrated by Wicker et al. (<xref ref-type="bibr" rid="CR96">2011</xref>) in an analysis of the short arm of chromosome 1D (1DS) which exists as a ditelosomic chromosome in a standard genetic stock of wheat used for chromosome sorting. Gene sequences for 1DS were assigned to two regions of <italic>Brachypodium</italic> chromosome 2, syntenic regions 1S and 1L, even though these <italic>Brachypodium</italic> regions are clearly differentiated when alignments with gene sequences from the ditelosomics 1AS, 1BS and 1AL, 1BL are carried out. In addition, the wheat ESTs mapping to the proximal region of 1DS in independent studies were also missing from the ditelo 1DS sequence dataset (Wicker et al. <xref ref-type="bibr" rid="CR96">2011</xref>).</p><p>In addition to providing the basis for analyzing conserved gene orders on a large scale (as described earlier), comparative genomics has been important in wheat and barley to define conserved features of genes, and several examples are now available for the identification of candidate genes for the phenotypes being studied. The characterization of the <italic>Vrn</italic> genes in wheat and barley (Yan et al. <xref ref-type="bibr" rid="CR99">2003</xref>, <xref ref-type="bibr" rid="CR100">2004</xref>, <xref ref-type="bibr" rid="CR101">2006</xref>; Yoshida et al. <xref ref-type="bibr" rid="CR102">2010</xref>) was facilitated by comparative analyses across wheat, barley, and rice. The importance of modifications in intron 1 for variation in expression of the <italic>Vrn</italic> genes was established through the analysis of allelic variants. A comparison to variants in <italic>Lolium perenne</italic> (Asp et al. <xref ref-type="bibr" rid="CR5">2011</xref>) showed that INDELS in several different locations within intron 1 could modify <italic>Vrn1</italic> expression. Additional examples include the identification of the bract suppression gene <italic>Trd1</italic>, a GATA transcription factor, on barley 1H through fine mapping and anchoring of the phenotype to a syntenic region in rice (Houston et al. <xref ref-type="bibr" rid="CR45">2012</xref>), the boron toxicity tolerance gene on barley 4H (Sutton et al. <xref ref-type="bibr" rid="CR90">2007</xref>), the <italic>Rht-D1</italic> gene region on 4D (Duan et al. <xref ref-type="bibr" rid="CR31">2012</xref>), and the NAC transcription factor on wheat 6B (Distelfeld et al. <xref ref-type="bibr" rid="CR27">2004</xref>, <xref ref-type="bibr" rid="CR28">2012</xref>). In the case of the NAC transcription factor, the functional attributes appeared to be quite different in rice and wheat (Distelfeld et al. <xref ref-type="bibr" rid="CR28">2012</xref>) and indicated extrapolating function based on shared DNA sequence structure may not always be possible.</p></sec><sec id="Sec5"><title>Gene isolation and new allele discovery</title><p>The unique features of the Triticeae genomes emphasize the importance of high-resolution mapping populations and physical maps developed in the target species to enable the de novo identification of genes that are unique to wheat and barley biology, as well as genes underlying QTLs. As genes and gene regions of interest are identified, targeted re-sequencing (Saintenac et al. <xref ref-type="bibr" rid="CR83">2011</xref>; Winfield et al. <xref ref-type="bibr" rid="CR97">2012</xref>) provides a valuable methodology for identifying new alleles in related varieties or wild relatives. The recent progress in high throughput marker development combined with new association genetics panels, physical maps, and survey sequences represent a breakthrough in map-based cloning in the Triticeae. In wheat, physical maps of chromosome 1A, 1B, 3A, 3B, and 3D (<ext-link ext-link-type="uri" xlink:href="http://urgi.versailles.inra.fr/gb2/gbrowse/wheat_phys_pub/">http://urgi.versailles.inra.fr/gb2/gbrowse/wheat_phys_pub/</ext-link>) as well as survey sequences of all 21 individual bread wheat chromosomes are already available on line (<ext-link ext-link-type="uri" xlink:href="http://urgi.versailles.inra.fr/Species/Wheat/Sequence-Repository">http://urgi.versailles.inra.fr/Species/Wheat/Sequence-Repository</ext-link>). In barley, a physical map, survey sequences of sorted chromosomes, several thousand of shotgun sequenced BAC clones and whole genome shotgun sequence assemblies were integrated to a physical/genetic genome scaffold providing an excellent template for accelerated map-based cloning and comparative genome-based candidate gene identification (IBSC <xref ref-type="bibr" rid="CR49">2012</xref>) (<ext-link ext-link-type="uri" xlink:href="http://mips.helmholtz-muenchen.de/plant/triticeae/barleyDisclaimer.jsp">http://mips.helmholtz-muenchen.de/plant/triticeae/barleyDisclaimer.jsp</ext-link>; <ext-link ext-link-type="uri" xlink:href="http://webblast.ipk-gatersleben.de/barley">http://webblast.ipk-gatersleben.de/barley</ext-link>). As an example, in the Triticeae more than 15 gene and QTL projects are benefiting already from access to these resources (Table <xref rid="Tab1" ref-type="table">1</xref>) and, since the reference sequence of chromosome 3B is underway, 343 scaffolds accounting for 29 Mb targeting 74 BAC-contigs sequences have already been provided to laboratories worldwide. Once candidate genes are identified, functional validation is needed to ascertain the function of the candidate. Both reverse and forward genetics approaches are now well established for wheat and barley. Stable (Agrobacterium, biolistic) and transient (VIGS) transformation systems are performed routinely in many laboratories worldwide, and mutagenized collections have been produced in both wheat and barley. In wheat, several mutant populations have been produced in diploid, tetraploid, and hexaploid genetics backgrounds, and projects are underway to establish TILLING by sequencing (Tsai et al. <xref ref-type="bibr" rid="CR93">2011</xref>). In barley, TILLING resources have been established (Caldwell et al. <xref ref-type="bibr" rid="CR18">2004</xref>; Talamè et al. <xref ref-type="bibr" rid="CR92">2008</xref>; Gottwald et al. <xref ref-type="bibr" rid="CR42">2009</xref>) that show a wide range in phenotype diversity for the discovery of genes contributing to the complex networks that underpin plant phenotypes. In parallel, natural allelic variation can also be explored by EcoTILLING approaches and associated to phenotypic variation (Xia et al. <xref ref-type="bibr" rid="CR98">2012</xref>).<table-wrap id="Tab1"><label>Table 1</label><caption><p>Examples of gene and QTL projects benefiting from the access to wheat and barley physical maps and sequences</p></caption><table frame="hsides" rules="groups"><thead><tr><th>Locus</th><th>Trait</th><th>Chromosome</th><th>Species</th><th>Organization</th><th>PI</th><th>Use of physical map/sequence information</th></tr></thead><tbody><tr><td><italic>YrH52</italic></td><td>Stripe rust resistance</td><td><italic>1BS</italic></td><td>Emmer wheat</td><td>University of Haifa- Israel</td><td>T. Fahima</td><td>2 physical non-overlapping contigs identified (total of 3.7 Mb with estimated gap of 0.4 Mb)</td></tr><tr><td><italic>PV-QTL</italic></td><td>Fiber content (QTL)</td><td><italic>1BL</italic></td><td>Bread wheat</td><td>INRA - France</td><td>J. Salse</td><td>1 physical map contig (645 kb) anchored to co-segregating COS CG marker</td></tr><tr><td><italic>QSng.sfr</italic></td><td>Glume blotch resistance (QTL)</td><td><italic>3BS</italic></td><td>Bread wheat</td><td>University of Zurich—Switzerland</td><td>B. Keller</td><td>3 sequenced contigs identfied(1.58 Mb)</td></tr><tr><td><italic>QYld.idw</italic></td><td>Yield (QTL)</td><td><italic>3BS</italic></td><td>Durum wheat</td><td>University of Bologna—Italy</td><td>R. Tuberosa</td><td>Region <200 kb in the physical map containing 4 candidate genes</td></tr><tr><td><italic>Sr2</italic></td><td>Stem rust resistance</td><td><italic>3BS</italic></td><td>Bread wheat</td><td>CSIRO and Murdoch University</td><td>W. Spielmeyer</td><td>1 sequenced contig (1.26 Mb) spanning the Sr2 genetic interval</td></tr><tr><td><italic>SV2</italic></td><td>Leaf rust resistance</td><td><italic>3BS</italic></td><td>Bread wheat</td><td>INTA-Argentina</td><td>MJ. Dieguez</td><td>2 sequenced contigs (1, 2, and 3 Mb) identified with flanking markers used for marker development, screening of BAC library from resistant cultivar and candidate gene identification</td></tr><tr><td><italic>SSt1</italic></td><td>Solid stem (saw fly resistance)</td><td><italic>3B</italic></td><td>Durum wheat</td><td>University of Saskatchewan—Canada</td><td>C. Pozniak</td><td>17 sequenced contigs identified for marker development, 8 new cosegrating markers developed</td></tr><tr><td><italic>QFt-3B</italic></td><td>Flowering time (QTL)</td><td><italic>3BS</italic></td><td>Bread wheat</td><td>IEB-Czech republic</td><td>J. Safar</td><td>38 sequenced contigs identified for marker development</td></tr><tr><td><italic>Qcrs.cpi-3B</italic></td><td>Crown rot (QTL)</td><td><italic>3BS</italic></td><td>Bread wheat</td><td>CSIRO—Australia</td><td>C. Liu</td><td>53 sequence contigs identified for marker development</td></tr><tr><td><italic>Pm41</italic></td><td>Powdery mildew</td><td><italic>3BL</italic></td><td>Bread wheat</td><td>China Agricultural University—China</td><td>Z. Liu/Z. Wang</td><td>9 sequence contigs identified for marker development</td></tr><tr><td><italic>qDHY.3BL</italic></td><td>Drought tolerance (QTL)</td><td><italic>3BL</italic></td><td>Bread wheat</td><td>ACPFG-INRA</td><td>P. Langridge-C. Feuillet</td><td>9 sequence contigs identified for marker development and candidate gene identification</td></tr><tr><td><italic>Yr49</italic></td><td>Yellow rust resistance</td><td><italic>3DS</italic></td><td>Bread wheat</td><td>CSIRO—Australia</td><td>W. Spielmeyer</td><td>Contig at the proximal side identified, contig at distal side not identified yet, and cosegregating contig identified</td></tr><tr><td><italic>cul4</italic></td><td>Tillering</td><td><italic>3H</italic></td><td>Barley</td><td>University of Milan—Italy</td><td>L. Rossini</td><td>One BAC spanning the <italic>cul4</italic> genetic interval and candidate gene identified and sequenced</td></tr></tbody></table></table-wrap></p><p>In Table <xref rid="Tab1" ref-type="table">1</xref>, a summary is provided for traits and their respective genes that have been defined in wheat and barley. The table focuses on a list of genes on the group 1 and 3 chromosomes in wheat and barley. At a broader level, in addition to identifying the genes for disease resistance, grain quality traits have also been well defined at the DNA level. Examples include the low and high molecular weight glutenin subunit loci on the group 1 chromosomes important for flour processing quality, and the Ha locus on 5D defining the soft/hard attributes of the grain (Chantret et al. <xref ref-type="bibr" rid="CR19">2005</xref>; Charles et al. <xref ref-type="bibr" rid="CR21">2009</xref>).</p></sec><sec id="Sec6"><title>Application in molecular breeding</title><p>Increased density of markers along genetic and physical maps using array-based techniques for genes and insertion sequence-based polymorphism markers as well as GBS in wheat and barley enable breeders to perform accurate association mapping studies (Heffner et al. <xref ref-type="bibr" rid="CR43">2010</xref>; Liu et al. <xref ref-type="bibr" rid="CR60">2012</xref>). Association genetics has only been recently applied to crop plants, (Mackay and Powell <xref ref-type="bibr" rid="CR62">2007</xref>) yet it is an exciting alternative to conventional QTL mapping in bi-parental crosses. It draws on the principle that linkage disequilibrium (LD) tends to be maintained over many generations between loci which are physically linked to one another. Panels of non-related lines represent many cycles of historical recombinations compared to typical QTL mapping populations. LD will likely decay very rapidly with genetic distance if the panel used consists of very diverse lines; thus, correlations between marker and QTL will be identified only if the marker is tightly linked to the QTL (Paux et al. <xref ref-type="bibr" rid="CR72">2012</xref>; Miedaner and Korzun <xref ref-type="bibr" rid="CR66">2012</xref>). The number of markers needed to accomplish such studies therefore increases with the diversity of the panel, and a balance must be found between the resolution of the panel and the power to detect associations. Barley and wheat can now rely on the genomics tools described above to develop large quantities of molecular markers.</p><p>However, to take the full advantage of these resources, it is essential that adapted association panels are developed. In the past years, several elite panels have been developed for wheat and barley, notably for European germplasm. Le Couviour et al. (<xref ref-type="bibr" rid="CR58">2011</xref>) described a panel of 195 French-grown elite winter wheat varieties. Reif et al. (<xref ref-type="bibr" rid="CR76">2011</xref>) used a 455 central European winter wheat varieties panel for association mapping of QTL for grain yield, heading date and Fusarium Head Blight resistance, while Cockram et al. (<xref ref-type="bibr" rid="CR25">2010</xref>) studied a 500 barley cultivar panel for 15 morphological traits. In the TriticeaeGenome project, breeders from France, the UK, and Germany established a panel of 376 varieties based on (1) general phenotypic levels of adaptation to field conditions, (2) phenotypic homogeneity, and (3) genotypic diversity. This panel has been used for genotyping and phenotyping adaptive traits such as yield, heading date, and plant height. It has been distributed to colleagues in India and Argentina who are interested in identifying new alleles in European winter wheat and is accessible for further collaboration. Thus, most of the material currently grown in Europe for wheat and barley is represented in one panel or another. The TriticeaeGenome panel and the one developed by Reif et al. (<xref ref-type="bibr" rid="CR76">2011</xref>) are complementary resources to investigate traits in western and central European wheat germplasm that could be used to cross-validate QTL regions. Reif et al. (<xref ref-type="bibr" rid="CR76">2011</xref>) identified QTL underlying grain yield on chromosomes 1B, 1D, 2A, 4A, 4D, 5A, 5B, and 7A and heading date on chromosomes 1B, 2B, 4B, 4D, 5A, 5D, and 7D. Moreover, the potential favorable alleles identified in these panels are more likely to be taken up by breeders as they will be already available in elite germplasm and more amenable for introduction into marker-assisted recurrent selection. Finally, genomic selection (GS) has been proposed as an alternative to use marker data in breeding that could correct some of the deficiencies in classical marker-assisted selection (Meuwissen <xref ref-type="bibr" rid="CR65">2009</xref>) and is the subject of further development in crop plants (Heffner et al. <xref ref-type="bibr" rid="CR43">2010</xref>). The TriticeaeGenome panel (376 individuals) represents a good example of the diversity in west European wheat, and it could be used to study GS in wheat. Indeed, the size of the TriticeaeGenome panel is sufficient to be divided into a training set and a validation set, and phenotypic data have already been gathered over 2 years in a total of seven locations. The panel itself is not linked to any commercial breeding programme, so it can be envisaged that both researchers and breeders use the resource.</p></sec><sec id="Sec7"><title>Bioinformatic tools and databases</title><p>The Triticeae community established a unique database, GrainGenes (<ext-link ext-link-type="uri" xlink:href="http://wheat.pw.usda.gov/">http://wheat.pw.usda.gov/</ext-link>), to provide a suite of services for the Triticeae and oat communities, including databases, documents, tools, data files, announcements, curation, and community assistance. To date, GrainGenes stores 76 wheat genetic maps, more than 100,000 genetic markers, and approximately 271,000 wheat ESTs. These sequences can be searched through a BLAST server or by using queries to get additional information on genetic mapping data. GrainGenes also hosts the Triticeae Repeat databank that comprises 1,717 sequences of wheat transposable elements. Another database, HarvEST (<ext-link ext-link-type="uri" xlink:href="http://harvest.ucr.edu/">http://harvest.ucr.edu/</ext-link>) that is highly frequented by users of the Triticeae community provides access to curated EST assemblies of wheat and barley as well as meta data linking to marker resources and orthologs of related grasses (Close et al. <xref ref-type="bibr" rid="CR23">2008</xref>). With the developments in physical mapping and sequencing activities, new databases have emerged to integrate outputs from studies on wheat and barley. For example, the INRA URGI Wheat database (<ext-link ext-link-type="uri" xlink:href="http://urgi.versailles.inra.fr/Species/Wheat">http://urgi.versailles.inra.fr/Species/Wheat</ext-link>) provides access to the physical maps of The TriticeaeGenome chromosome 1BL, 1AS, 3B, and 3D as well as to the 3A physical map which is hosted at the WGGRC. Physical maps of cv. Chinese Spring chromosomes that are constructed under the framework of the IWGSC are being integrated regularly into the database (<ext-link ext-link-type="uri" xlink:href="http://www.wheatgenome.org/Projects/IWGSC-Bread-Wheat-Projects/Physical-mapping/">http://www.wheatgenome.org/Projects/IWGSC-Bread-Wheat-Projects/Physical-mapping/</ext-link>). A GBrowse displays the physical maps in relation with other datasets (e.g., genetic markers, reference sequences, QTLs, and SNPs). To date, the database stores 26 wheat genetic maps, 19,029 markers, 324 QTLs, 10,819 SNPs, and 544,529 ESTs. In addition, URGI hosts the IWGSC sequence repository that provides access to the survey sequence assemblies of the 21 chromosomes of Chinese Spring (<ext-link ext-link-type="uri" xlink:href="http://urgi.versailles.inra.fr/Species/Wheat/Sequence-Repository">http://urgi.versailles.inra.fr/Species/Wheat/Sequence-Repository</ext-link>). The URGI database is mirrored at the MIPS which host equivalent datasets for the barley genome (<ext-link ext-link-type="uri" xlink:href="http://mips.helmholtz-muenchen.de/plant/barley/index.jsp">http://mips.helmholtz-muenchen.de/plant/barley/index.jsp</ext-link>).</p><p>In support of the international efforts to obtain reference sequences from rice (riceGAAS; <ext-link ext-link-type="uri" xlink:href="http://ricegaas.dna.affrc.go.jp/">http://ricegaas.dna.affrc.go.jp/</ext-link>) and the Triticeae, a versatile, easy-to-use online automated tool for annotation, a semi-automated annotation pipeline called TriAnnot has been developed (Leroy et al. <xref ref-type="bibr" rid="CR59">2012</xref>). Its modular architecture allows for the annotation and masking of transposable elements, the structural and functional annotation of protein-coding genes with an evidence-based quality indexing, and the identification of conserved non-coding sequences and molecular markers. To date, the TriAnnot pipeline is parallelized on a 712 CPU computing cluster that can run a 1-Gb sequence annotation in less than 26 h. When evaluated on rice and wheat data sets, TriAnnot systematically showed a higher level of reliability than other annotation pipelines that are not improved for wheat. As it is easily adaptable to the annotation of other plant genomes, TriAnnot should become a useful resource for the annotation of large and complex genomes in the future.</p><p>The rapid advances in wheat and barley provide the basis for the next steps in the efficient exploitation of the newly available resources for research and breeding. The international consortia discussed in this review have been successful in establishing an interface of cooperation to facilitate the exchange of genome sequence data and to increase the impact of advances on growers and breeding programs. Emerging technological advances in physical and genetic mapping, marker development and association genetics, bioinformatics and map-based cloning provide a foundation for step changes in germplasm development that would otherwise take a much longer period of time.</p></sec></body><back><ack><sec id="d29e1351"><title>Open Access</title><p>This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited.</p></sec></ack><ref-list id="Bib1"><title>References</title><ref id="CR1"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Allen</surname><given-names>AM</given-names></name><name><surname>Barker</surname><given-names>GLA</given-names></name><name><surname>Berry</surname><given-names>ST</given-names></name><name><surname>Coghill</surname><given-names>JA</given-names></name><name><surname>Gwilliam</surname><given-names>R</given-names></name><name><surname>Kirby</surname><given-names>S</given-names></name><name><surname>Robinson</surname><given-names>P</given-names></name><name><surname>Brenchley</surname><given-names>RC</given-names></name><name><surname>D’Amore</surname><given-names>R</given-names></name><name><surname>McKenzie</surname><given-names>N</given-names></name><name><surname>Waite</surname><given-names>D</given-names></name><name><surname>Hall</surname><given-names>A</given-names></name><name><surname>Bevan</surname><given-names>M</given-names></name><name><surname>Neil Hall</surname><given-names>N</given-names></name><name><surname>Edwards</surname><given-names>KJ</given-names></name></person-group><article-title>Transcript-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (<italic>Triticum aestivum</italic> L.)</article-title><source>Plant Biotechnol J</source><year>2011</year><volume>2011</volume><fpage>1</fpage><lpage>14</lpage></mixed-citation></ref><ref id="CR2"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Allouis</surname><given-names>S</given-names></name><name><surname>Moore</surname><given-names>G</given-names></name><name><surname>Bellec</surname><given-names>A</given-names></name><name><surname>Sharp</surname><given-names>R</given-names></name><name><surname>Faivre Rampant</surname><given-names>P</given-names></name><name><surname>Mortimer</surname><given-names>K</given-names></name><name><surname>Pateyron</surname><given-names>S</given-names></name><name><surname>Foote</surname><given-names>TN</given-names></name><name><surname>Griffiths</surname><given-names>S</given-names></name><name><surname>Caboche</surname><given-names>M</given-names></name><name><surname>Chalhoub</surname><given-names>B</given-names></name></person-group><article-title>Construction and characterisation of a hexaploid wheat (<italic>Triticum aestivum</italic> L.) BAC library from the reference germplasm ‘Chinese Spring’</article-title><source>Cereal Res Comm</source><year>2003</year><volume>31</volume><fpage>331</fpage><lpage>338</lpage></mixed-citation></ref><ref id="CR3"><mixed-citation publication-type="other">Appels R, Akhunov E, Alaux M, Caccamo M, Cattonaro F, Dolezel J, Edwards D, Luo MC, Matthews D, Guilhot N, Paul E, Wicker T, Eversole K and Feuillet C (2010) IWGSC: physical mapping standard protocols workshop report. In: W.G.R.C. Kansas State University (ed.) Plant and animal genome meeting vol. 56. San Diego, CA, USA, pp. 5–9</mixed-citation></ref><ref id="CR4"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Ariyadasa</surname><given-names>R</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name></person-group><article-title>Advances in BAC-based physical mapping and map integration strategies in plants</article-title><source>J Biomed Biotechnol</source><year>2012</year><volume>2012</volume><fpage>184854</fpage><pub-id pub-id-type="doi">10.1155/2012/184854</pub-id><pub-id pub-id-type="pmid">22500080</pub-id></mixed-citation></ref><ref id="CR5"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Asp</surname><given-names>T</given-names></name><name><surname>Byrne</surname><given-names>S</given-names></name><name><surname>Gundlach</surname><given-names>H</given-names></name><name><surname>Bruggmann</surname><given-names>R</given-names></name><name><surname>Mayer</surname><given-names>KFX</given-names></name><name><surname>Andersen</surname><given-names>JR</given-names></name><name><surname>Mingliang Xu</surname><given-names>M</given-names></name><name><surname>Morten</surname><given-names>G</given-names></name><name><surname>Lenk</surname><given-names>I</given-names></name><name><surname>Lubberstedt</surname><given-names>T</given-names></name></person-group><article-title>Comparative sequence analysis of VRN1 alleles of <italic>Lolium perenne</italic> with the co-linear regions in barley, wheat, and rice</article-title><source>Mol Genet Genom</source><year>2011</year><volume>286</volume><fpage>433</fpage><lpage>447</lpage><pub-id pub-id-type="doi">10.1007/s00438-011-0654-8</pub-id></mixed-citation></ref><ref id="CR6"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bennetzen</surname><given-names>JL</given-names></name><name><surname>Schmutz</surname><given-names>J</given-names></name><name><surname>Wang</surname><given-names>H</given-names></name><name><surname>Percifield</surname><given-names>R</given-names></name><name><surname>Hawkins</surname><given-names>J</given-names></name><name><surname>Pontaroli</surname><given-names>AC</given-names></name><name><surname>Estep</surname><given-names>M</given-names></name><name><surname>Feng</surname><given-names>L</given-names></name><name><surname>Vaughn</surname><given-names>JN</given-names></name><name><surname>Grimwood</surname><given-names>J</given-names></name><name><surname>Jenkins</surname><given-names>J</given-names></name><name><surname>Barry</surname><given-names>K</given-names></name><name><surname>Lindquist</surname><given-names>E</given-names></name><name><surname>Hellsten</surname><given-names>U</given-names></name><name><surname>Deshpande</surname><given-names>S</given-names></name><name><surname>Wang</surname><given-names>X</given-names></name><name><surname>Wu</surname><given-names>X</given-names></name><name><surname>Mitros</surname><given-names>T</given-names></name><name><surname>Triplett</surname><given-names>J</given-names></name><name><surname>Yang</surname><given-names>X</given-names></name><name><surname>Ye</surname><given-names>C-Y</given-names></name><name><surname>Mauro-Herrera</surname><given-names>M</given-names></name><name><surname>Wang</surname><given-names>L</given-names></name><name><surname>Li</surname><given-names>P</given-names></name><name><surname>Sharma</surname><given-names>M</given-names></name><name><surname>Sharma</surname><given-names>R</given-names></name><name><surname>Ronald</surname><given-names>PC</given-names></name><name><surname>Panaud</surname><given-names>O</given-names></name><name><surname>Kellogg</surname><given-names>EA</given-names></name><name><surname>Brutnell</surname><given-names>TP</given-names></name><name><surname>Doust</surname><given-names>AN</given-names></name><name><surname>Tuskan</surname><given-names>GA</given-names></name><name><surname>Rokhsar</surname><given-names>D</given-names></name><name><surname>Devos</surname><given-names>KM</given-names></name></person-group><article-title>Reference genome sequence of the model plant <italic>Setaria</italic></article-title><source>Nat Biotech</source><year>2012</year><volume>30</volume><fpage>555</fpage><lpage>561</lpage><pub-id pub-id-type="doi">10.1038/nbt.2196</pub-id></mixed-citation></ref><ref id="CR7"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Berkman</surname><given-names>PJ</given-names></name><name><surname>Skarshewski</surname><given-names>A</given-names></name><name><surname>Lorenc</surname><given-names>MT</given-names></name><name><surname>Lai</surname><given-names>K</given-names></name><name><surname>Duran</surname><given-names>C</given-names></name><name><surname>Ling</surname><given-names>EY</given-names></name><name><surname>Stiller</surname><given-names>J</given-names></name><name><surname>Smits</surname><given-names>L</given-names></name><name><surname>Imelfort</surname><given-names>M</given-names></name><name><surname>Manoli</surname><given-names>S</given-names></name><name><surname>McKenzie</surname><given-names>M</given-names></name><name><surname>Kubaláková</surname><given-names>M</given-names></name><name><surname>Šimková</surname><given-names>H</given-names></name><name><surname>Batley</surname><given-names>J</given-names></name><name><surname>Fleury</surname><given-names>D</given-names></name><name><surname>Doležel</surname><given-names>J</given-names></name><name><surname>Edwards</surname><given-names>D</given-names></name></person-group><article-title>Sequencing and assembly of low copy and genic regions of isolated <italic>Triticum aestivum</italic> chromosome arm 7DS</article-title><source>Plant Biotechnol J</source><year>2011</year><volume>9</volume><fpage>768</fpage><lpage>775</lpage><pub-id pub-id-type="doi">10.1111/j.1467-7652.2010.00587.x</pub-id><pub-id pub-id-type="pmid">21356002</pub-id></mixed-citation></ref><ref id="CR8"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Berkman</surname><given-names>PJ</given-names></name><name><surname>Skarshewski</surname><given-names>A</given-names></name><name><surname>Manoli</surname><given-names>S</given-names></name><name><surname>Lorenc</surname><given-names>MT</given-names></name><name><surname>Stiller</surname><given-names>J</given-names></name><name><surname>Smits</surname><given-names>L</given-names></name><name><surname>Lai</surname><given-names>K</given-names></name><name><surname>Campbell</surname><given-names>E</given-names></name><name><surname>Kubaláková</surname><given-names>M</given-names></name><name><surname>Simková</surname><given-names>H</given-names></name><name><surname>Batley</surname><given-names>J</given-names></name><name><surname>Doležel</surname><given-names>J</given-names></name><name><surname>Hernandez</surname><given-names>P</given-names></name><name><surname>Edwards</surname><given-names>D</given-names></name></person-group><article-title>Sequencing wheat chromosome arm 7BS delimits the 7BS/4AL translocation and reveals homoeologous gene conservation</article-title><source>Theor Appl Genet</source><year>2012</year><volume>124</volume><fpage>423</fpage><lpage>432</lpage><pub-id pub-id-type="doi">10.1007/s00122-011-1717-2</pub-id><pub-id pub-id-type="pmid">22001910</pub-id></mixed-citation></ref><ref id="CR9"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bertin</surname><given-names>I</given-names></name><name><surname>Zhu</surname><given-names>JH</given-names></name><name><surname>Gale</surname><given-names>MD</given-names></name></person-group><article-title>SSCP-SNP in pearl millet—a new marker system for comparative genetics</article-title><source>Theor Appl Genet</source><year>2005</year><volume>110</volume><fpage>1467</fpage><lpage>1472</lpage><pub-id pub-id-type="doi">10.1007/s00122-005-1981-0</pub-id><pub-id pub-id-type="pmid">15809850</pub-id></mixed-citation></ref><ref id="CR10"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Birchler</surname><given-names>JA</given-names></name><name><surname>Gao</surname><given-names>Z</given-names></name><name><surname>Han</surname><given-names>F</given-names></name></person-group><article-title>A tale of two centromeres—diversity of structure but conservation of function in plants and animals</article-title><source>Funct Integr Genom</source><year>2009</year><volume>9</volume><fpage>7</fpage><lpage>13</lpage><pub-id pub-id-type="doi">10.1007/s10142-008-0104-9</pub-id></mixed-citation></ref><ref id="CR11"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Breen</surname><given-names>J</given-names></name><name><surname>Bellgard</surname><given-names>M</given-names></name></person-group><article-title>Germin-like proteins (GLPs) in cereal genomes: gene clustering and dynamic roles in plant defence</article-title><source>Funct Integr Genom</source><year>2010</year><volume>10</volume><fpage>463</fpage><lpage>476</lpage><pub-id pub-id-type="doi">10.1007/s10142-010-0184-1</pub-id></mixed-citation></ref><ref id="CR12"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Breen</surname><given-names>J</given-names></name><name><surname>Li</surname><given-names>D</given-names></name><name><surname>Dunn</surname><given-names>DS</given-names></name><name><surname>Békés</surname><given-names>F</given-names></name><name><surname>Kong</surname><given-names>X</given-names></name><name><surname>Zhang</surname><given-names>J</given-names></name><name><surname>Jia</surname><given-names>J</given-names></name><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Mago</surname><given-names>R</given-names></name><name><surname>Ma</surname><given-names>W</given-names></name><name><surname>Bellgard</surname><given-names>M</given-names></name><name><surname>Appels</surname><given-names>R</given-names></name></person-group><article-title>Wheat beta-expansin (EXPB11) genes: identification of the expressed gene on chromosome 3BS carrying a pollen allergen domain</article-title><source>BMC Plant Biol</source><year>2010</year><volume>10</volume><fpage>99</fpage><pub-id pub-id-type="doi">10.1186/1471-2229-10-99</pub-id><pub-id pub-id-type="pmid">20507562</pub-id></mixed-citation></ref><ref id="CR13"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Breen</surname><given-names>J</given-names></name><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Kong</surname><given-names>X</given-names></name><name><surname>Zhang</surname><given-names>J</given-names></name><name><surname>Ma</surname><given-names>W</given-names></name><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Appels</surname><given-names>R</given-names></name><name><surname>Bellgard</surname><given-names>M</given-names></name></person-group><article-title>A highly conserved gene island of three genes on chromosome 3B of hexaploid wheat: diverse gene function and genomic structure maintained in a tightly linked block</article-title><source>BMC Plant Biol</source><year>2010</year><volume>10</volume><fpage>98</fpage><pub-id pub-id-type="doi">10.1186/1471-2229-10-98</pub-id><pub-id pub-id-type="pmid">20507561</pub-id></mixed-citation></ref><ref id="CR14"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Brueggeman</surname><given-names>R</given-names></name><name><surname>Rostoks</surname><given-names>N</given-names></name><name><surname>Kudrna</surname><given-names>D</given-names></name><name><surname>Kilian</surname><given-names>A</given-names></name><name><surname>Han</surname><given-names>F</given-names></name><name><surname>Chen</surname><given-names>J</given-names></name><name><surname>Druka</surname><given-names>A</given-names></name><name><surname>Steffenson</surname><given-names>B</given-names></name><name><surname>Kleinhofs</surname><given-names>A</given-names></name></person-group><article-title>The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases</article-title><source>Proc Natl Acad Sci U S A</source><year>2002</year><volume>99</volume><issue>14</issue><fpage>9328</fpage><lpage>9333</lpage><pub-id pub-id-type="doi">10.1073/pnas.142284999</pub-id><pub-id pub-id-type="pmid">12077318</pub-id></mixed-citation></ref><ref id="CR15"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Brueggeman</surname><given-names>R</given-names></name><name><surname>Druka</surname><given-names>A</given-names></name><name><surname>Nirmala</surname><given-names>J</given-names></name><name><surname>Cavileer</surname><given-names>T</given-names></name><name><surname>Drader</surname><given-names>T</given-names></name><name><surname>Rostoks</surname><given-names>N</given-names></name><name><surname>Mirlohi</surname><given-names>A</given-names></name><name><surname>Bennypaul</surname><given-names>H</given-names></name><name><surname>Gill</surname><given-names>U</given-names></name><name><surname>Kudrna</surname><given-names>D</given-names></name><name><surname>Whitelaw</surname><given-names>C</given-names></name><name><surname>Kilian</surname><given-names>A</given-names></name><name><surname>Han</surname><given-names>F</given-names></name><name><surname>Sun</surname><given-names>Y</given-names></name><name><surname>Gill</surname><given-names>K</given-names></name><name><surname>Steffenson</surname><given-names>B</given-names></name><name><surname>Kleinhofs</surname><given-names>A</given-names></name></person-group><article-title>The stem rust resistance gene Rpg5 encodes a protein with nucleotide-binding-site, leucine-rich, and protein kinase domains</article-title><source>Proc Natl Acad Sci U S A</source><year>2008</year><volume>105</volume><issue>39</issue><fpage>14970</fpage><lpage>14975</lpage><pub-id pub-id-type="doi">10.1073/pnas.0807270105</pub-id><pub-id pub-id-type="pmid">18812501</pub-id></mixed-citation></ref><ref id="CR16"><mixed-citation publication-type="other">Bulgarelli D, Biselli C, Collins NC, Consonni G, Stanca AM, Schulze-Lefert P, Valè G (2010) The CC-NB-LRR-type Rdg2a resistance gene confers immunity to the seed-borne barley leaf stripe pathogen in the absence of hypersensitive cell death. PLoS One 5(9): pii: e12599</mixed-citation></ref><ref id="CR17"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Büschges</surname><given-names>R</given-names></name><name><surname>Hollricher</surname><given-names>K</given-names></name><name><surname>Panstruga</surname><given-names>R</given-names></name><name><surname>Simons</surname><given-names>G</given-names></name><name><surname>Wolter</surname><given-names>M</given-names></name><name><surname>Frijters</surname><given-names>A</given-names></name><name><surname>Daelen</surname><given-names>R</given-names></name><name><surname>Lee</surname><given-names>T</given-names></name><name><surname>Diergaarde</surname><given-names>P</given-names></name><name><surname>Groenendijk</surname><given-names>J</given-names></name><name><surname>Töpsch</surname><given-names>S</given-names></name><name><surname>Vos</surname><given-names>P</given-names></name><name><surname>Salamini</surname><given-names>F</given-names></name><name><surname>Schulze-Lefert</surname><given-names>P</given-names></name></person-group><article-title>The barley Mlo gene: a novel control element of plant pathogen resistance</article-title><source>Cell</source><year>1997</year><volume>88</volume><issue>5</issue><fpage>695</fpage><lpage>705</lpage><pub-id pub-id-type="doi">10.1016/S0092-8674(00)81912-1</pub-id><pub-id pub-id-type="pmid">9054509</pub-id></mixed-citation></ref><ref id="CR18"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Caldwell</surname><given-names>KS</given-names></name><name><surname>Dvorak</surname><given-names>J</given-names></name><name><surname>Lagudah</surname><given-names>ES</given-names></name><name><surname>Akhunov</surname><given-names>E</given-names></name><name><surname>Luo</surname><given-names>M-C</given-names></name><name><surname>Wolters</surname><given-names>P</given-names></name><name><surname>Powell</surname><given-names>W</given-names></name></person-group><article-title>Sequence Polymorphism in Polyploid Wheat and Their D-Genome Diploid Ancestor</article-title><source>Genetics</source><year>2004</year><volume>167</volume><fpage>941</fpage><lpage>947</lpage><pub-id pub-id-type="doi">10.1534/genetics.103.016303</pub-id><pub-id pub-id-type="pmid">15238542</pub-id></mixed-citation></ref><ref id="CR19"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Chantret</surname><given-names>N</given-names></name><name><surname>Salse</surname><given-names>J</given-names></name><name><surname>Sabot</surname><given-names>F</given-names></name><name><surname>Rahman</surname><given-names>S</given-names></name><name><surname>Bellec</surname><given-names>A</given-names></name><name><surname>Laubin</surname><given-names>B</given-names></name><name><surname>Dubois</surname><given-names>I</given-names></name><name><surname>Dossat</surname><given-names>C</given-names></name><name><surname>Sourdille</surname><given-names>P</given-names></name><name><surname>Joudrier</surname><given-names>P</given-names></name><name><surname>Gautier</surname><given-names>MF</given-names></name><name><surname>Cattolico</surname><given-names>L</given-names></name><name><surname>Beckert</surname><given-names>M</given-names></name><name><surname>Aubourg</surname><given-names>S</given-names></name><name><surname>Weissenbach</surname><given-names>J</given-names></name><name><surname>Caboche</surname><given-names>M</given-names></name><name><surname>Bernard</surname><given-names>M</given-names></name><name><surname>Leroy</surname><given-names>P</given-names></name><name><surname>Chalhoub</surname><given-names>B</given-names></name></person-group><article-title>Molecular basis of evolutionary events that shaped the hardness locus in diploid and polyploid wheat species (<italic>Triticum</italic> and <italic>Aegilops</italic>)</article-title><source>Plant Cell</source><year>2005</year><volume>17</volume><fpage>1033</fpage><lpage>1045</lpage><pub-id pub-id-type="doi">10.1105/tpc.104.029181</pub-id><pub-id pub-id-type="pmid">15749759</pub-id></mixed-citation></ref><ref id="CR20"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Charles</surname><given-names>M</given-names></name><name><surname>Belcram</surname><given-names>H</given-names></name><name><surname>Just</surname><given-names>J</given-names></name><name><surname>Huneau</surname><given-names>C</given-names></name><name><surname>Viollet</surname><given-names>A</given-names></name><name><surname>Couloux</surname><given-names>A</given-names></name><name><surname>Segurens</surname><given-names>B</given-names></name><name><surname>Carter</surname><given-names>M</given-names></name><name><surname>Huteau</surname><given-names>V</given-names></name><name><surname>Coriton</surname><given-names>O</given-names></name><name><surname>Appels</surname><given-names>R</given-names></name><name><surname>Samain</surname><given-names>S</given-names></name><name><surname>Chalhoub</surname><given-names>B</given-names></name></person-group><article-title>Dynamics and differential proliferation of transposable elements during the evolution of the B and A genomes of wheat</article-title><source>Genetics</source><year>2008</year><volume>180</volume><fpage>1071</fpage><lpage>1086</lpage><pub-id pub-id-type="doi">10.1534/genetics.108.092304</pub-id><pub-id pub-id-type="pmid">18780739</pub-id></mixed-citation></ref><ref id="CR21"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Charles</surname><given-names>M</given-names></name><name><surname>Tang</surname><given-names>H</given-names></name><name><surname>Belcram</surname><given-names>H</given-names></name><name><surname>Paterson</surname><given-names>A</given-names></name><name><surname>Gornicki</surname><given-names>P</given-names></name><name><surname>Chalhoub</surname><given-names>BP</given-names></name></person-group><article-title>Sixty million years in evolution of soft grain trait in grasses: emergence of the softness locus in the common ancestor of Pooideae and Ehrhartoideae, after their divergence from Panicoideae</article-title><source>Mol Biol Evol</source><year>2009</year><volume>26</volume><fpage>1651</fpage><lpage>1661</lpage><pub-id pub-id-type="doi">10.1093/molbev/msp076</pub-id><pub-id pub-id-type="pmid">19395588</pub-id></mixed-citation></ref><ref id="CR22"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Choulet</surname><given-names>F</given-names></name><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Rustenholz</surname><given-names>C</given-names></name><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Salse</surname><given-names>J</given-names></name><name><surname>Leroy</surname><given-names>P</given-names></name><name><surname>Schlub</surname><given-names>S</given-names></name><name><surname>Paslier</surname><given-names>MC</given-names></name><name><surname>Magdelenat</surname><given-names>G</given-names></name><name><surname>Gonthier</surname><given-names>C</given-names></name><name><surname>Couloux</surname><given-names>A</given-names></name><name><surname>Budak</surname><given-names>H</given-names></name><name><surname>Breen</surname><given-names>J</given-names></name><name><surname>Pumphrey</surname><given-names>M</given-names></name><name><surname>Liu</surname><given-names>S</given-names></name><name><surname>Kong</surname><given-names>X</given-names></name><name><surname>Jia</surname><given-names>J</given-names></name><name><surname>Gut</surname><given-names>M</given-names></name><name><surname>Brunel</surname><given-names>D</given-names></name><name><surname>Anderson</surname><given-names>JA</given-names></name><name><surname>Gill</surname><given-names>BS</given-names></name><name><surname>Appels</surname><given-names>R</given-names></name><name><surname>Keller</surname><given-names>B</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name></person-group><article-title>Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces</article-title><source>Plant Cell</source><year>2010</year><volume>22</volume><fpage>1686</fpage><lpage>1701</lpage><pub-id pub-id-type="doi">10.1105/tpc.110.074187</pub-id><pub-id pub-id-type="pmid">20581307</pub-id></mixed-citation></ref><ref id="CR23"><mixed-citation publication-type="other">Close TJ, Wanamaker S, Roose ML, Lyon M (2008) HarvEST. In: Edwards D (ed) Plant bioinformatics. Humana Press, pp 161–177</mixed-citation></ref><ref id="CR24"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Close</surname><given-names>TJ</given-names></name><name><surname>Bhat</surname><given-names>PR</given-names></name><name><surname>Lonardi</surname><given-names>S</given-names></name><name><surname>Wu</surname><given-names>Y</given-names></name><name><surname>Rostoks</surname><given-names>N</given-names></name><name><surname>Ramsay</surname><given-names>L</given-names></name><name><surname>Druka</surname><given-names>A</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name><name><surname>Svensson</surname><given-names>JT</given-names></name><name><surname>Wanamaker</surname><given-names>S</given-names></name><name><surname>Bozdag</surname><given-names>S</given-names></name><name><surname>Roose</surname><given-names>ML</given-names></name><name><surname>Moscou</surname><given-names>MJ</given-names></name><name><surname>Chao</surname><given-names>S</given-names></name><name><surname>Varshney</surname><given-names>RK</given-names></name><name><surname>Szűcs</surname><given-names>P</given-names></name><name><surname>Sato</surname><given-names>K</given-names></name><name><surname>Hayes</surname><given-names>PM</given-names></name><name><surname>Matthews</surname><given-names>DE</given-names></name><name><surname>Kleinhofs</surname><given-names>A</given-names></name><name><surname>Muehlbauer</surname><given-names>GJ</given-names></name><name><surname>DeYoung</surname><given-names>J</given-names></name><name><surname>Marshall</surname><given-names>DF</given-names></name><name><surname>Madishetty</surname><given-names>K</given-names></name><name><surname>Fenton</surname><given-names>RD</given-names></name><name><surname>Condamine</surname><given-names>P</given-names></name><name><surname>Graner</surname><given-names>A</given-names></name><name><surname>Waugh</surname><given-names>R</given-names></name></person-group><article-title>Development and implementation of high-throughput SNP genotyping in barley</article-title><source>BMC Genom</source><year>2009</year><volume>10</volume><fpage>582</fpage><pub-id pub-id-type="doi">10.1186/1471-2164-10-582</pub-id></mixed-citation></ref><ref id="CR25"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Cockram</surname><given-names>J</given-names></name><name><surname>White</surname><given-names>J</given-names></name><name><surname>Zuluaga</surname><given-names>DL</given-names></name><name><surname>Smith</surname><given-names>D</given-names></name><name><surname>Comadran</surname><given-names>J</given-names></name><name><surname>Macaulay</surname><given-names>M</given-names></name><name><surname>Luo</surname><given-names>Z</given-names></name><name><surname>Kearsey</surname><given-names>MJ</given-names></name><name><surname>Werner</surname><given-names>P</given-names></name><name><surname>Harrap</surname><given-names>D</given-names></name><name><surname>Tapsell</surname><given-names>C</given-names></name><name><surname>Liu</surname><given-names>H</given-names></name><name><surname>Hedley</surname><given-names>PE</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name><name><surname>Schulte</surname><given-names>D</given-names></name><name><surname>Steuernagel</surname><given-names>B</given-names></name><name><surname>Marshall</surname><given-names>DF</given-names></name><name><surname>Thomas</surname><given-names>WT</given-names></name><name><surname>Ramsay</surname><given-names>L</given-names></name><name><surname>Mackay</surname><given-names>I</given-names></name><name><surname>Balding</surname><given-names>DJ</given-names></name><name><surname>Consortium</surname><given-names>AGOUEB</given-names></name><name><surname>Waugh</surname><given-names>R</given-names></name><name><surname>O’Sullivan</surname><given-names>DM</given-names></name></person-group><article-title>Genome-wide association mapping to candidate polymorphism resolution in the unsequenced barley genome</article-title><source>Proc Natl Acad Sci U S A</source><year>2010</year><volume>107</volume><fpage>21611</fpage><lpage>21616</lpage><pub-id pub-id-type="doi">10.1073/pnas.1010179107</pub-id><pub-id pub-id-type="pmid">21115826</pub-id></mixed-citation></ref><ref id="CR26"><mixed-citation publication-type="other">Comadran J, Kilian B, Russell J, Ramsay L, Stein N, Ganal M, Shaw P, Bayer M, Thomas W, Marshall D, Hedley P, Tondelli A, Pecchioni N, Francia E, Korzun V, Walther A, Waugh R (2012) A homologue of Antirrhinum CENTRORADIALIS is a component of the quantitative photoperiod and vernalization independent EARLINESS PER SE 2 locus in cultivated barley. Nat Genet (in press)</mixed-citation></ref><ref id="CR27"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Distelfeld</surname><given-names>A</given-names></name><name><surname>Uauy</surname><given-names>C</given-names></name><name><surname>Olmos</surname><given-names>S</given-names></name><name><surname>Schlatter</surname><given-names>AR</given-names></name><name><surname>Dubcovsky</surname><given-names>J</given-names></name><name><surname>Fahima</surname><given-names>T</given-names></name></person-group><article-title>Microcolinearity between a 2-cM region encompassing the grain protein content locus Gpc-6B1 on wheat chromosome 6B and a 350-kb region on rice chromosome 2</article-title><source>Funct Integr Genom</source><year>2004</year><volume>4</volume><fpage>59</fpage><lpage>66</lpage><pub-id pub-id-type="doi">10.1007/s10142-003-0097-3</pub-id></mixed-citation></ref><ref id="CR28"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Distelfeld</surname><given-names>A</given-names></name><name><surname>Pearce</surname><given-names>SP</given-names></name><name><surname>Avni</surname><given-names>R</given-names></name><name><surname>Scherer</surname><given-names>B</given-names></name><name><surname>Uauy</surname><given-names>C</given-names></name><name><surname>Piston</surname><given-names>F</given-names></name><name><surname>Slade</surname><given-names>A</given-names></name><name><surname>Zhao</surname><given-names>R</given-names></name><name><surname>Dubcovsky</surname><given-names>J</given-names></name></person-group><article-title>Divergent functions of orthologous NAC transcription factors in wheat and rice</article-title><source>Plant Mol Biol</source><year>2012</year><volume>78</volume><fpage>515</fpage><lpage>524</lpage><pub-id pub-id-type="doi">10.1007/s11103-012-9881-6</pub-id><pub-id pub-id-type="pmid">22278768</pub-id></mixed-citation></ref><ref id="CR29"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dolezel</surname><given-names>J</given-names></name><name><surname>Kubalakova</surname><given-names>M</given-names></name><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Bartos</surname><given-names>J</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name></person-group><article-title>Chromosome-based genomics in the cereals</article-title><source>Chromosome Res</source><year>2007</year><volume>15</volume><fpage>51</fpage><lpage>66</lpage><pub-id pub-id-type="doi">10.1007/s10577-006-1106-x</pub-id><pub-id pub-id-type="pmid">17295126</pub-id></mixed-citation></ref><ref id="CR30"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dolezel</surname><given-names>J</given-names></name><name><surname>Vrana</surname><given-names>J</given-names></name><name><surname>Safar</surname><given-names>J</given-names></name><name><surname>Bartos</surname><given-names>J</given-names></name><name><surname>Kubalakova</surname><given-names>M</given-names></name><name><surname>Simkova</surname><given-names>H</given-names></name></person-group><article-title>Chromosomes in the flow to simplifying genome analysis</article-title><source>Funct Integr Genom</source><year>2012</year><volume>12</volume><fpage>397</fpage><lpage>416</lpage><pub-id pub-id-type="doi">10.1007/s10142-012-0293-0</pub-id></mixed-citation></ref><ref id="CR31"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Duan</surname><given-names>J</given-names></name><name><surname>Wu</surname><given-names>J</given-names></name><name><surname>Liu</surname><given-names>Y</given-names></name><name><surname>Xiao</surname><given-names>J</given-names></name><name><surname>Ziao</surname><given-names>J</given-names></name><name><surname>Zhao</surname><given-names>G</given-names></name><name><surname>Jia</surname><given-names>J</given-names></name><name><surname>Kong</surname><given-names>X</given-names></name></person-group><article-title>New cis-regulatory elements in the Rht-D1 locus region of wheat</article-title><source>Funct Integr Genom</source><year>2012</year><volume>12</volume><fpage>489</fpage><lpage>500</lpage><pub-id pub-id-type="doi">10.1007/s10142-012-0283-2</pub-id></mixed-citation></ref><ref id="CR32"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dubcovsky</surname><given-names>J</given-names></name><name><surname>Dvorak</surname><given-names>J</given-names></name></person-group><article-title>Ribosomal RNA multigene loci: nomads of the Triticeae genomes</article-title><source>Genetics</source><year>1995</year><volume>140</volume><fpage>1367</fpage><lpage>1377</lpage><pub-id pub-id-type="pmid">7498776</pub-id></mixed-citation></ref><ref id="CR33"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dubcovsky</surname><given-names>J</given-names></name><name><surname>Dvorak</surname><given-names>J</given-names></name></person-group><article-title>Genome plasticity a key factor in the success of polyploid wheat under domestication</article-title><source>Science</source><year>2007</year><volume>316</volume><fpage>1862</fpage><lpage>1866</lpage><pub-id pub-id-type="doi">10.1126/science.1143986</pub-id><pub-id pub-id-type="pmid">17600208</pub-id></mixed-citation></ref><ref id="CR34"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Elshire</surname><given-names>RJ</given-names></name><name><surname>Glaubitz</surname><given-names>JC</given-names></name><name><surname>Sun</surname><given-names>Q</given-names></name><name><surname>Poland</surname><given-names>JA</given-names></name><name><surname>Kawamoto</surname><given-names>K</given-names></name><name><surname>Buckler</surname><given-names>ES</given-names></name><name><surname>Mitchell</surname><given-names>SE</given-names></name></person-group><article-title>A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species</article-title><source>PLoS One</source><year>2011</year><volume>6</volume><fpage>e19379</fpage><pub-id pub-id-type="doi">10.1371/journal.pone.0019379</pub-id><pub-id pub-id-type="pmid">21573248</pub-id></mixed-citation></ref><ref id="CR35"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Faris</surname><given-names>JD</given-names></name><name><surname>Zhang</surname><given-names>Z</given-names></name><name><surname>Lu</surname><given-names>H</given-names></name><name><surname>Lu</surname><given-names>S</given-names></name><name><surname>Reddy</surname><given-names>L</given-names></name><name><surname>Cloutier</surname><given-names>S</given-names></name><name><surname>Fellers</surname><given-names>JP</given-names></name><name><surname>Meinhardt</surname><given-names>SW</given-names></name><name><surname>Rasmussen</surname><given-names>JB</given-names></name><name><surname>Xu</surname><given-names>SS</given-names></name><name><surname>Oliver</surname><given-names>RP</given-names></name><name><surname>Simons</surname><given-names>KJ</given-names></name><name><surname>Friesen</surname><given-names>TL</given-names></name></person-group><article-title>A unique wheat disease resistance-like gene governs effector-triggered susceptibility to necrotrophic pathogens</article-title><source>Proc Natl Acad Sci U S A</source><year>2010</year><volume>107</volume><fpage>13544</fpage><lpage>13549</lpage><pub-id pub-id-type="doi">10.1073/pnas.1004090107</pub-id><pub-id pub-id-type="pmid">20624958</pub-id></mixed-citation></ref><ref id="CR36"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Eversole</surname><given-names>K</given-names></name></person-group><article-title>Physical mapping of the wheat genome: a coordinated effort to lay the foundation for genome sequencing and develop tools for breeders</article-title><source>Isr J Plant Sci</source><year>2007</year><volume>5</volume><fpage>307</fpage><lpage>313</lpage><pub-id pub-id-type="doi">10.1560/IJPS.55.3-4.307</pub-id></mixed-citation></ref><ref id="CR37"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Leach</surname><given-names>JE</given-names></name><name><surname>Rogers</surname><given-names>J</given-names></name><name><surname>Schnable</surname><given-names>PS</given-names></name><name><surname>Eversole</surname><given-names>K</given-names></name></person-group><article-title>Crop genome sequencing: lessons and rationales</article-title><source>Trends Plant Sci</source><year>2011</year><volume>16</volume><fpage>77</fpage><lpage>88</lpage><pub-id pub-id-type="doi">10.1016/j.tplants.2010.10.005</pub-id><pub-id pub-id-type="pmid">21081278</pub-id></mixed-citation></ref><ref id="CR38"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Flavell</surname><given-names>AJ</given-names></name><name><surname>Knox</surname><given-names>MR</given-names></name><name><surname>Pearce</surname><given-names>SR</given-names></name><name><surname>Ellis</surname><given-names>THN</given-names></name></person-group><article-title>Retrotransposon-based insertion polymorphisms (RBIP) for high throughput marker analysis</article-title><source>Plant J</source><year>1998</year><volume>16</volume><fpage>643</fpage><lpage>650</lpage><pub-id pub-id-type="doi">10.1046/j.1365-313x.1998.00334.x</pub-id><pub-id pub-id-type="pmid">10036780</pub-id></mixed-citation></ref><ref id="CR39"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Frenkel</surname><given-names>Z</given-names></name><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Mester</surname><given-names>D</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Korol</surname><given-names>A</given-names></name></person-group><article-title>LTC: a novel algorithm to improve the efficiency of contig assembly for physical mapping in complex genomes</article-title><source>BMC Bioinforma</source><year>2010</year><volume>11</volume><fpage>584</fpage><pub-id pub-id-type="doi">10.1186/1471-2105-11-584</pub-id></mixed-citation></ref><ref id="CR40"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Fu</surname><given-names>D</given-names></name><name><surname>Uauy</surname><given-names>C</given-names></name><name><surname>Distelfeld</surname><given-names>A</given-names></name><name><surname>Blechl</surname><given-names>A</given-names></name><name><surname>Epstein</surname><given-names>L</given-names></name><name><surname>Chen</surname><given-names>X</given-names></name><name><surname>Sela</surname><given-names>H</given-names></name><name><surname>Fahima</surname><given-names>T</given-names></name><name><surname>Dubcovsky</surname><given-names>J</given-names></name></person-group><article-title>A kinase-START gene confers temperature-dependent resistance to wheat stripe rust</article-title><source>Science</source><year>2009</year><volume>323</volume><fpage>1357</fpage><lpage>1360</lpage><pub-id pub-id-type="doi">10.1126/science.1166289</pub-id><pub-id pub-id-type="pmid">19228999</pub-id></mixed-citation></ref><ref id="CR41"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Fu</surname><given-names>Y</given-names></name><name><surname>Springer</surname><given-names>NM</given-names></name><name><surname>Ying</surname><given-names>K</given-names></name><name><surname>Yeh</surname><given-names>C-T</given-names></name><name><surname>Iniguez</surname><given-names>AL</given-names></name><etal></etal></person-group><article-title>High-resolution genotyping via whole genome hybridizations to microarrays containing long oligonucleotide probes</article-title><source>PLoS One</source><year>2010</year><volume>5</volume><fpage>e14178</fpage><pub-id pub-id-type="doi">10.1371/journal.pone.0014178</pub-id><pub-id pub-id-type="pmid">21152036</pub-id></mixed-citation></ref><ref id="CR42"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Gottwald</surname><given-names>S</given-names></name><name><surname>Bauer</surname><given-names>P</given-names></name><name><surname>Komatsuda</surname><given-names>T</given-names></name><name><surname>Lundqvist</surname><given-names>U</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name></person-group><article-title>TILLING in the two-rowed barley cultivar ‘Barke’ reveals preferred sites of functional diversity in the gene <italic>HvHoxI</italic></article-title><source>BMC Res Notes</source><year>2009</year><volume>2</volume><fpage>258</fpage><pub-id pub-id-type="doi">10.1186/1756-0500-2-258</pub-id><pub-id pub-id-type="pmid">20017921</pub-id></mixed-citation></ref><ref id="CR43"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Heffner</surname><given-names>EL</given-names></name><name><surname>Lorenz</surname><given-names>AJ</given-names></name><name><surname>Jannink</surname><given-names>J-L</given-names></name><name><surname>Sorrells</surname><given-names>ME</given-names></name></person-group><article-title>Plant breeding with genomic selection: gain per unit time and cost</article-title><source>Crop Sci</source><year>2010</year><volume>50</volume><fpage>1681</fpage><lpage>1690</lpage><pub-id pub-id-type="doi">10.2135/cropsci2009.11.0662</pub-id></mixed-citation></ref><ref id="CR44"><mixed-citation publication-type="other">Hernandez P, Martis M, Dorado G, Pfeifer M, Galvez S, Schaaf S, Jouve N, Simkova H, Valarik M, Dolezel J, Mayer KF (2012) Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content. Plant J. doi:10.1111/j.1365-1313X.2011.04808.x</mixed-citation></ref><ref id="CR45"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Houston</surname><given-names>K</given-names></name><name><surname>Druka</surname><given-names>A</given-names></name><name><surname>Bonar</surname><given-names>N</given-names></name><name><surname>Macaulay</surname><given-names>M</given-names></name><name><surname>Lundqvist</surname><given-names>U</given-names></name><name><surname>Franckowiak</surname><given-names>J</given-names></name><name><surname>Morgante</surname><given-names>M</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name><name><surname>Waugh</surname><given-names>R</given-names></name></person-group><article-title>Analysis of the barley bract suppression gene Trd1</article-title><source>Theor Appl Genet</source><year>2012</year><volume>125</volume><fpage>33</fpage><lpage>45</lpage><pub-id pub-id-type="doi">10.1007/s00122-012-1814-x</pub-id><pub-id pub-id-type="pmid">22395962</pub-id></mixed-citation></ref><ref id="CR46"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Huang</surname><given-names>L</given-names></name><name><surname>Brooks</surname><given-names>SA</given-names></name><name><surname>Li</surname><given-names>W</given-names></name><name><surname>Fellers</surname><given-names>JP</given-names></name><name><surname>Trick</surname><given-names>HN</given-names></name><name><surname>Gill</surname><given-names>BS</given-names></name></person-group><article-title>Map-based cloning of leaf rust resistance gene Lr21 from the large and polyploid genome of bread wheat</article-title><source>Genetics</source><year>2003</year><volume>164</volume><fpage>655</fpage><lpage>664</lpage><pub-id pub-id-type="pmid">12807786</pub-id></mixed-citation></ref><ref id="CR47"><mixed-citation publication-type="other">Huang BE, George AW, Forrest KL, Kilian A, Hayden MJ, Morell MK, Cavanagh CR (2012) A multiparent advanced generation inter-cross population for genetic analysis in wheat. Plant Biotech J. doi:10.1111/j.1467-7652.2012.00702.x</mixed-citation></ref><ref id="CR48"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hui</surname><given-names>L</given-names></name><name><surname>McNicol</surname><given-names>J</given-names></name><name><surname>Bayer</surname><given-names>M</given-names></name><name><surname>Morris</surname><given-names>JA</given-names></name><name><surname>Cardle</surname><given-names>L</given-names></name><name><surname>Marshall</surname><given-names>DF</given-names></name><name><surname>Schulte</surname><given-names>D</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name><name><surname>Shi</surname><given-names>B-J</given-names></name><name><surname>Taudien</surname><given-names>S</given-names></name><name><surname>Waugh</surname><given-names>R</given-names></name><name><surname>Hedley</surname><given-names>PE</given-names></name></person-group><article-title>Highly parallel gene-to-BAC addressing using microarrays</article-title><source>Biotechniques</source><year>2011</year><volume>50</volume><fpage>165</fpage><lpage>174</lpage><pub-id pub-id-type="pmid">21486237</pub-id></mixed-citation></ref><ref id="CR49"><mixed-citation publication-type="other">International Barley Genome Sequencing Consortium (IBSC) (2012) A physical, genetic and functional sequence assembly of the barley genome. Nature (Lond). doi:10.1038/Nature11543</mixed-citation></ref><ref id="CR50"><mixed-citation publication-type="journal"><person-group person-group-type="author"><collab>International Brachypodium Initiative (IBI)</collab></person-group><article-title>Genome sequencing and analysis of the model grass <italic>Brachypodium distachyon</italic></article-title><source>Nature</source><year>2010</year><volume>463</volume><fpage>763</fpage><lpage>768</lpage><pub-id pub-id-type="doi">10.1038/nature08747</pub-id><pub-id pub-id-type="pmid">20148030</pub-id></mixed-citation></ref><ref id="CR51"><mixed-citation publication-type="journal"><person-group person-group-type="author"><collab>International Rice Genome Sequencing Project</collab></person-group><article-title>The map-based sequence of the rice genome</article-title><source>Nature</source><year>2005</year><volume>436</volume><issue>7052</issue><fpage>793</fpage><lpage>800</lpage><pub-id pub-id-type="doi">10.1038/nature03895</pub-id><pub-id pub-id-type="pmid">16100779</pub-id></mixed-citation></ref><ref id="CR52"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kanisay</surname><given-names>L</given-names></name><name><surname>Dawe</surname><given-names>RK</given-names></name></person-group><article-title>Centromeres: long interspersed spaces with adaptive features</article-title><source>Funct Integr Genom</source><year>2009</year><volume>9</volume><fpage>287</fpage><lpage>292</lpage><pub-id pub-id-type="doi">10.1007/s10142-009-0124-0</pub-id></mixed-citation></ref><ref id="CR53"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Komatsuda</surname><given-names>T</given-names></name><name><surname>Pourkheirandish</surname><given-names>M</given-names></name><name><surname>He</surname><given-names>C</given-names></name><name><surname>Azhaguvel</surname><given-names>P</given-names></name><name><surname>Kanamori</surname><given-names>H</given-names></name><name><surname>Perovic</surname><given-names>D</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name><name><surname>Graner</surname><given-names>A</given-names></name><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Tagiri</surname><given-names>A</given-names></name><name><surname>Lundqvist</surname><given-names>U</given-names></name><name><surname>Fujimura</surname><given-names>T</given-names></name><name><surname>Matsuoka</surname><given-names>M</given-names></name><name><surname>Matsumoto</surname><given-names>T</given-names></name><name><surname>Yano</surname><given-names>M</given-names></name></person-group><article-title>Six-rowed barley originated from a mutation in a homeodomain-leucine zipper I-class homeobox gene</article-title><source>Proc Natl Acad Sci U S A</source><year>2007</year><volume>104</volume><issue>4</issue><fpage>1424</fpage><lpage>1429</lpage><pub-id pub-id-type="doi">10.1073/pnas.0608580104</pub-id><pub-id pub-id-type="pmid">17220272</pub-id></mixed-citation></ref><ref id="CR54"><mixed-citation publication-type="book"><person-group person-group-type="author"><name><surname>Krattinger</surname><given-names>S</given-names></name><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Keller</surname><given-names>B</given-names></name></person-group><person-group person-group-type="editor"><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Muehlbauer</surname><given-names>GJ</given-names></name></person-group><article-title>Map-based cloning of genes in Triticeae (wheat and barley)</article-title><source>Genetics and genomics of the Triticeae</source><year>2009</year><publisher-loc>New York</publisher-loc><publisher-name>Springer</publisher-name><fpage>337</fpage><lpage>357</lpage></mixed-citation></ref><ref id="CR55"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Krattinger</surname><given-names>SG</given-names></name><name><surname>Lagudah</surname><given-names>ES</given-names></name><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Risk</surname><given-names>JM</given-names></name><name><surname>Ashton</surname><given-names>AR</given-names></name><name><surname>Selter</surname><given-names>LL</given-names></name><name><surname>Matsumoto</surname><given-names>T</given-names></name><name><surname>Keller</surname><given-names>B</given-names></name></person-group><article-title>Lr34 multi-pathogen resistance ABC transporter: molecular analysis of homoeologous and orthologous genes in hexaploid wheat and other grass species</article-title><source>Plant J</source><year>2011</year><volume>65</volume><issue>3</issue><fpage>392</fpage><lpage>403</lpage><pub-id pub-id-type="doi">10.1111/j.1365-313X.2010.04430.x</pub-id><pub-id pub-id-type="pmid">21265893</pub-id></mixed-citation></ref><ref id="CR56"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kumar</surname><given-names>A</given-names></name><name><surname>Bassi</surname><given-names>F</given-names></name><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Al-Azzam</surname><given-names>O</given-names></name><name><surname>Michalack de Jimenez</surname><given-names>M</given-names></name><name><surname>Denton</surname><given-names>AM</given-names></name><name><surname>Gu</surname><given-names>YQ</given-names></name><name><surname>Iqbal</surname><given-names>MJ</given-names></name><name><surname>Huttner</surname><given-names>E</given-names></name><name><surname>Kilian</surname><given-names>A</given-names></name><name><surname>Kumar</surname><given-names>S</given-names></name><name><surname>Goyal</surname><given-names>A</given-names></name><name><surname>Tiwari</surname><given-names>V</given-names></name><name><surname>Dogramaci</surname><given-names>M</given-names></name><name><surname>Balyan</surname><given-names>HS</given-names></name><name><surname>Dhaliwal</surname><given-names>HS</given-names></name><name><surname>Gupta</surname><given-names>PK</given-names></name><name><surname>Randhawa</surname><given-names>GS</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Pawlowski</surname><given-names>WP</given-names></name><name><surname>Kianian</surname><given-names>SF</given-names></name></person-group><article-title>DNA repair and crossing over favor similar chromosome regions as discovered in radiation hybrid of <italic>Triticum</italic></article-title><source>BMC Genom</source><year>2012</year><volume>13</volume><issue>1</issue><fpage>339</fpage><pub-id pub-id-type="doi">10.1186/1471-2164-13-339</pub-id></mixed-citation></ref><ref id="CR57"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Lazo</surname><given-names>GR</given-names></name><name><surname>Chao</surname><given-names>S</given-names></name><name><surname>Hummel</surname><given-names>DD</given-names></name><name><surname>Edwards</surname><given-names>H</given-names></name><name><surname>Crossman</surname><given-names>CC</given-names></name><name><surname>Lui</surname><given-names>N</given-names></name><name><surname>Matthews</surname><given-names>DE</given-names></name><name><surname>Carollo</surname><given-names>VL</given-names></name><name><surname>Hane</surname><given-names>DL</given-names></name><name><surname>You</surname><given-names>FM</given-names></name><name><surname>Butler</surname><given-names>GE</given-names></name><name><surname>Miller</surname><given-names>RE</given-names></name><name><surname>Close</surname><given-names>TJ</given-names></name><name><surname>Peng</surname><given-names>JH</given-names></name><name><surname>Lapitan</surname><given-names>NLV</given-names></name><name><surname>Gustafson</surname><given-names>JP</given-names></name><name><surname>Qi</surname><given-names>LL</given-names></name><name><surname>Echalier</surname><given-names>B</given-names></name><name><surname>Gill</surname><given-names>BS</given-names></name><name><surname>Dilbirligi</surname><given-names>M</given-names></name><name><surname>Randhawa</surname><given-names>HS</given-names></name><name><surname>Gill</surname><given-names>KS</given-names></name><name><surname>Greene</surname><given-names>RA</given-names></name><name><surname>Sorrells</surname><given-names>ME</given-names></name><name><surname>Akhunov</surname><given-names>ED</given-names></name><name><surname>Dvorak</surname><given-names>J</given-names></name><name><surname>Linkiewicz</surname><given-names>AM</given-names></name><name><surname>Dubcovsky</surname><given-names>J</given-names></name><name><surname>Hossain</surname><given-names>KG</given-names></name><name><surname>Kalavacharla</surname><given-names>V</given-names></name><name><surname>Kianian</surname><given-names>SF</given-names></name><name><surname>Mahmoud</surname><given-names>AA</given-names></name><name><surname>Miftahudin</surname><given-names>X-F</given-names></name><name><surname>Ma</surname><given-names>EJ</given-names></name><name><surname>Conley</surname><given-names>JA</given-names></name><name><surname>Anderson</surname><given-names>MS</given-names></name><name><surname>Pathan</surname><given-names>HT</given-names></name><name><surname>Nguyen</surname><given-names>PE</given-names></name><name><surname>McGuire</surname><given-names>COQ</given-names></name><name><surname>Anderson</surname><given-names>OD</given-names></name></person-group><article-title>Development of an expressed sequence tag (EST) resource for wheat (<italic>Triticum aestivum</italic> L.): EST generation, unigene analysis, probe selection and bioinformatics for a 16,000-locus bin-delineated map</article-title><source>Genetics</source><year>2004</year><volume>168</volume><fpage>585</fpage><lpage>593</lpage><pub-id pub-id-type="doi">10.1534/genetics.104.034777</pub-id><pub-id pub-id-type="pmid">15514037</pub-id></mixed-citation></ref><ref id="CR58"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Couviour</surname><given-names>F</given-names></name><name><surname>Faure</surname><given-names>S</given-names></name><name><surname>Poupard</surname><given-names>B</given-names></name><name><surname>Flodrops</surname><given-names>Y</given-names></name><name><surname>Dubreuil</surname><given-names>P</given-names></name><name><surname>Praud</surname><given-names>S</given-names></name></person-group><article-title>Analysis of genetic structure in a panel of elite wheat varieties and relevance for association mapping</article-title><source>Theor Appl Genet</source><year>2011</year><volume>123</volume><issue>5</issue><fpage>715</fpage><lpage>727</lpage><pub-id pub-id-type="doi">10.1007/s00122-011-1621-9</pub-id><pub-id pub-id-type="pmid">21667038</pub-id></mixed-citation></ref><ref id="CR59"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Leroy</surname><given-names>P</given-names></name><name><surname>Guilhot</surname><given-names>N</given-names></name><name><surname>Sakai</surname><given-names>H</given-names></name><name><surname>Bernard</surname><given-names>A</given-names></name><name><surname>Choulet</surname><given-names>F</given-names></name><name><surname>Theil</surname><given-names>S</given-names></name><name><surname>Reboux</surname><given-names>S</given-names></name><name><surname>Amano</surname><given-names>N</given-names></name><name><surname>Flutre</surname><given-names>T</given-names></name><name><surname>Pellegrin</surname><given-names>C</given-names></name><name><surname>Ohyanagi</surname><given-names>H</given-names></name><name><surname>Seidel</surname><given-names>M</given-names></name><name><surname>Giacomoni</surname><given-names>F</given-names></name><name><surname>Reichstadt</surname><given-names>M</given-names></name><name><surname>Alaux</surname><given-names>M</given-names></name><name><surname>Gicquello</surname><given-names>E</given-names></name><name><surname>Legeai</surname><given-names>F</given-names></name><name><surname>Cerutti</surname><given-names>L</given-names></name><name><surname>Tanaka</surname><given-names>T</given-names></name><name><surname>Mayer</surname><given-names>K</given-names></name><name><surname>Itoh</surname><given-names>T</given-names></name><name><surname>Quesneville</surname><given-names>H</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name></person-group><article-title>TriAnnot: a versatile and high performance pipeline for the automated annotation of plant genomes</article-title><source>Front Plant Sci</source><year>2012</year><volume>3</volume><fpage>1</fpage><lpage>14</lpage><pub-id pub-id-type="doi">10.3389/fpls.2012.00005</pub-id><pub-id pub-id-type="pmid">22645563</pub-id></mixed-citation></ref><ref id="CR60"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Liu</surname><given-names>Y</given-names></name><name><surname>He</surname><given-names>Z</given-names></name><name><surname>Appels</surname><given-names>R</given-names></name><name><surname>Xia</surname><given-names>X</given-names></name></person-group><article-title>Functional markers in wheat: current status and future prospects</article-title><source>Theor Appl Genet</source><year>2012</year><volume>125</volume><fpage>1</fpage><lpage>10</lpage><pub-id pub-id-type="doi">10.1007/s00122-012-1829-3</pub-id><pub-id pub-id-type="pmid">22366867</pub-id></mixed-citation></ref><ref id="CR61"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Luo</surname><given-names>MC</given-names></name><name><surname>Thomas</surname><given-names>C</given-names></name><name><surname>You</surname><given-names>FM</given-names></name><name><surname>Hsiao</surname><given-names>J</given-names></name><name><surname>Ouyang</surname><given-names>S</given-names></name><name><surname>Buell</surname><given-names>CR</given-names></name><name><surname>Malandro</surname><given-names>M</given-names></name><name><surname>McGuire</surname><given-names>PE</given-names></name><name><surname>Anderson</surname><given-names>OD</given-names></name><name><surname>Dvorak</surname><given-names>J</given-names></name></person-group><article-title>High-throughput fingerprinting of bacterial artificial chromosomes using the snapshot labeling kit and sizing of restriction fragments by capillary electrophoresis</article-title><source>Genomics</source><year>2003</year><volume>82</volume><fpage>378</fpage><lpage>389</lpage><pub-id pub-id-type="doi">10.1016/S0888-7543(03)00128-9</pub-id><pub-id pub-id-type="pmid">12906862</pub-id></mixed-citation></ref><ref id="CR62"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Mackay</surname><given-names>I</given-names></name><name><surname>Powell</surname><given-names>W</given-names></name></person-group><article-title>Methods for linkage disequilibrium mapping in crops</article-title><source>Trends Plant Sci</source><year>2007</year><volume>12</volume><fpage>57</fpage><lpage>63</lpage><pub-id pub-id-type="doi">10.1016/j.tplants.2006.12.001</pub-id><pub-id pub-id-type="pmid">17224302</pub-id></mixed-citation></ref><ref id="CR63"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Mayer</surname><given-names>KF</given-names></name><name><surname>Taudien</surname><given-names>S</given-names></name><name><surname>Martis</surname><given-names>M</given-names></name><name><surname>Simková</surname><given-names>H</given-names></name><name><surname>Suchánková</surname><given-names>P</given-names></name><name><surname>Gundlach</surname><given-names>H</given-names></name><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Petzold</surname><given-names>A</given-names></name><name><surname>Felder</surname><given-names>M</given-names></name><name><surname>Steuernagel</surname><given-names>B</given-names></name><name><surname>Scholz</surname><given-names>U</given-names></name><name><surname>Graner</surname><given-names>A</given-names></name><name><surname>Platzer</surname><given-names>M</given-names></name><name><surname>Dolezel</surname><given-names>J</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name></person-group><article-title>Gene content and virtual gene order of barley chromosome 1H</article-title><source>Plant Physiol</source><year>2009</year><volume>151</volume><fpage>496</fpage><lpage>505</lpage><pub-id pub-id-type="doi">10.1104/pp.109.142612</pub-id><pub-id pub-id-type="pmid">19692534</pub-id></mixed-citation></ref><ref id="CR64"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Mayer</surname><given-names>KF</given-names></name><name><surname>Martis</surname><given-names>M</given-names></name><name><surname>Hedley</surname><given-names>PE</given-names></name><name><surname>Simková</surname><given-names>H</given-names></name><name><surname>Liu</surname><given-names>H</given-names></name><name><surname>Morris</surname><given-names>JA</given-names></name><name><surname>Steuernagel</surname><given-names>B</given-names></name><name><surname>Taudien</surname><given-names>S</given-names></name><name><surname>Roessner</surname><given-names>S</given-names></name><name><surname>Gundlach</surname><given-names>H</given-names></name><name><surname>Kubaláková</surname><given-names>M</given-names></name><name><surname>Suchánková</surname><given-names>P</given-names></name><name><surname>Murat</surname><given-names>F</given-names></name><name><surname>Felder</surname><given-names>M</given-names></name><name><surname>Nussbaumer</surname><given-names>T</given-names></name><name><surname>Graner</surname><given-names>A</given-names></name><name><surname>Salse</surname><given-names>J</given-names></name><name><surname>Endo</surname><given-names>T</given-names></name><name><surname>Sakai</surname><given-names>H</given-names></name><name><surname>Tanaka</surname><given-names>T</given-names></name><name><surname>Itoh</surname><given-names>T</given-names></name><name><surname>Sato</surname><given-names>K</given-names></name><name><surname>Platzer</surname><given-names>M</given-names></name><name><surname>Matsumoto</surname><given-names>T</given-names></name><name><surname>Scholz</surname><given-names>U</given-names></name><name><surname>Dolezel</surname><given-names>J</given-names></name><name><surname>Waugh</surname><given-names>R</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name></person-group><article-title>Unlocking the barley genome by chromosomal and comparative genomics</article-title><source>Plant Cell</source><year>2011</year><volume>23</volume><fpage>1249</fpage><lpage>1263</lpage><pub-id pub-id-type="doi">10.1105/tpc.110.082537</pub-id><pub-id pub-id-type="pmid">21467582</pub-id></mixed-citation></ref><ref id="CR65"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Meuwissen</surname><given-names>TH</given-names></name></person-group><article-title>Accuracy of breeding values of ‘unrelated’ individuals predicted by dense SNP genotyping</article-title><source>Genet Sel Evol</source><year>2009</year><volume>41</volume><fpage>35</fpage><pub-id pub-id-type="doi">10.1186/1297-9686-41-35</pub-id><pub-id pub-id-type="pmid">19519896</pub-id></mixed-citation></ref><ref id="CR66"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Miedaner</surname><given-names>T</given-names></name><name><surname>Korzun</surname><given-names>V</given-names></name></person-group><article-title>Marker-assisted selection for disease resistance in wheat and barley breeding</article-title><source>Phytopathology</source><year>2012</year><volume>102</volume><fpage>560</fpage><lpage>566</lpage><pub-id pub-id-type="doi">10.1094/PHYTO-05-11-0157</pub-id><pub-id pub-id-type="pmid">22568813</pub-id></mixed-citation></ref><ref id="CR67"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Muñoz-Amatriaín</surname><given-names>M</given-names></name><name><surname>Moscou</surname><given-names>MJ</given-names></name><name><surname>Bhat</surname><given-names>PR</given-names></name><name><surname>Svensson</surname><given-names>JT</given-names></name><name><surname>Bartoš</surname><given-names>J</given-names></name><name><surname>Suchánková</surname><given-names>P</given-names></name><name><surname>Šimková</surname><given-names>H</given-names></name><name><surname>Endo</surname><given-names>TR</given-names></name><name><surname>Fenton</surname><given-names>RD</given-names></name><name><surname>Lonardi</surname><given-names>S</given-names></name><name><surname>Castillo</surname><given-names>AM</given-names></name><name><surname>Chao</surname><given-names>S</given-names></name><name><surname>Cistué</surname><given-names>L</given-names></name><name><surname>Cuesta-Marcos</surname><given-names>A</given-names></name><name><surname>Forrest</surname><given-names>KL</given-names></name><name><surname>Hayden</surname><given-names>MJ</given-names></name><name><surname>Hayes</surname><given-names>PM</given-names></name><name><surname>Horsley</surname><given-names>RD</given-names></name><name><surname>Makoto</surname><given-names>K</given-names></name><name><surname>Moody</surname><given-names>D</given-names></name><name><surname>Sato</surname><given-names>K</given-names></name><name><surname>Vallés</surname><given-names>MP</given-names></name><name><surname>Wulff</surname><given-names>BBH</given-names></name><name><surname>Muehlbauer</surname><given-names>GJ</given-names></name><name><surname>Doležel</surname><given-names>J</given-names></name><name><surname>Close</surname><given-names>TJ</given-names></name></person-group><article-title>An improved consensus linkage map of barley based on flow-sorted chromosomes and single nucleotide polymorphism markers</article-title><source>Plant Genome</source><year>2011</year><volume>4</volume><fpage>238</fpage><lpage>249</lpage><pub-id pub-id-type="doi">10.3835/plantgenome2011.08.0023</pub-id></mixed-citation></ref><ref id="CR68"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Nair</surname><given-names>SK</given-names></name><name><surname>Wang</surname><given-names>N</given-names></name><name><surname>Turuspekov</surname><given-names>Y</given-names></name><name><surname>Pourkheirandish</surname><given-names>M</given-names></name><name><surname>Sinsuwongwat</surname><given-names>S</given-names></name><name><surname>Chen</surname><given-names>G</given-names></name><name><surname>Sameri</surname><given-names>M</given-names></name><name><surname>Tagiri</surname><given-names>A</given-names></name><name><surname>Honda</surname><given-names>I</given-names></name><name><surname>Watanabe</surname><given-names>Y</given-names></name><name><surname>Kanamori</surname><given-names>H</given-names></name><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name><name><surname>Nagamura</surname><given-names>Y</given-names></name><name><surname>Matsumoto</surname><given-names>T</given-names></name><name><surname>Komatsuda</surname><given-names>T</given-names></name></person-group><article-title>Cleistogamous flowering in barley arises from the suppression of microRNA-guided HvAP2 mRNA cleavage</article-title><source>Proc Natl Acad Sci U S A</source><year>2010</year><volume>107</volume><issue>1</issue><fpage>490</fpage><lpage>495</lpage><pub-id pub-id-type="doi">10.1073/pnas.0909097107</pub-id><pub-id pub-id-type="pmid">20018663</pub-id></mixed-citation></ref><ref id="CR69"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Paterson</surname><given-names>AH</given-names></name><name><surname>Bowers</surname><given-names>JE</given-names></name><name><surname>Bruggmann</surname><given-names>R</given-names></name><name><surname>Dubchak</surname><given-names>I</given-names></name><name><surname>Grimwood</surname><given-names>J</given-names></name><name><surname>Gundlach</surname><given-names>H</given-names></name><name><surname>Haberer</surname><given-names>G</given-names></name><name><surname>Hellsten</surname><given-names>U</given-names></name><name><surname>Mitros</surname><given-names>T</given-names></name><name><surname>Poliakov</surname><given-names>A</given-names></name><name><surname>Schmutz</surname><given-names>J</given-names></name><name><surname>Spannagl</surname><given-names>M</given-names></name><name><surname>Tang</surname><given-names>H</given-names></name><name><surname>Wang</surname><given-names>X</given-names></name><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Bharti</surname><given-names>AK</given-names></name><name><surname>Chapman</surname><given-names>J</given-names></name><name><surname>Feltus</surname><given-names>FA</given-names></name><name><surname>Gowik</surname><given-names>U</given-names></name><name><surname>Grigoriev</surname><given-names>IV</given-names></name><name><surname>Lyons</surname><given-names>E</given-names></name><name><surname>Maher</surname><given-names>CA</given-names></name><name><surname>Martis</surname><given-names>M</given-names></name><name><surname>Narechania</surname><given-names>A</given-names></name><name><surname>Otillar</surname><given-names>RP</given-names></name><name><surname>Penning</surname><given-names>BW</given-names></name><name><surname>Salamov</surname><given-names>AA</given-names></name><name><surname>Wang</surname><given-names>Y</given-names></name><name><surname>Zhang</surname><given-names>L</given-names></name><name><surname>Carpita</surname><given-names>NC</given-names></name><name><surname>Freeling</surname><given-names>M</given-names></name><name><surname>Gingle</surname><given-names>AR</given-names></name><name><surname>Hash</surname><given-names>CT</given-names></name><name><surname>Keller</surname><given-names>B</given-names></name><name><surname>Klein</surname><given-names>P</given-names></name><name><surname>Kresovich</surname><given-names>S</given-names></name><name><surname>McCann</surname><given-names>MC</given-names></name><name><surname>Ming</surname><given-names>R</given-names></name><name><surname>Peterson</surname><given-names>DG</given-names></name><name><surname>Mehboob ur</surname><given-names>R</given-names></name><name><surname>Ware</surname><given-names>D</given-names></name><name><surname>Westhoff</surname><given-names>P</given-names></name><name><surname>Mayer</surname><given-names>KFX</given-names></name><name><surname>Messing</surname><given-names>J</given-names></name><name><surname>Rokhsar</surname><given-names>DS</given-names></name></person-group><article-title>The <italic>Sorghum</italic> bicolor genome and the diversification of grasses</article-title><source>Nature</source><year>2009</year><volume>457</volume><fpage>551</fpage><lpage>556</lpage><pub-id pub-id-type="doi">10.1038/nature07723</pub-id><pub-id pub-id-type="pmid">19189423</pub-id></mixed-citation></ref><ref id="CR70"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Sourdille</surname><given-names>P</given-names></name><name><surname>Salse</surname><given-names>J</given-names></name><name><surname>Saintenac</surname><given-names>C</given-names></name><name><surname>Choulet</surname><given-names>F</given-names></name><name><surname>Leroy</surname><given-names>P</given-names></name><name><surname>Korol</surname><given-names>A</given-names></name><name><surname>Michalak</surname><given-names>M</given-names></name><name><surname>Kianian</surname><given-names>S</given-names></name><name><surname>Spielmeyer</surname><given-names>W</given-names></name><name><surname>Lagudah</surname><given-names>E</given-names></name><name><surname>Somers</surname><given-names>D</given-names></name><name><surname>Kilian</surname><given-names>A</given-names></name><name><surname>Alaux</surname><given-names>M</given-names></name><name><surname>Vautrin</surname><given-names>S</given-names></name><name><surname>Berges</surname><given-names>H</given-names></name><name><surname>Eversole</surname><given-names>K</given-names></name><name><surname>Appels</surname><given-names>R</given-names></name><name><surname>Safar</surname><given-names>J</given-names></name><name><surname>Simkova</surname><given-names>H</given-names></name><name><surname>Dolezel</surname><given-names>J</given-names></name><name><surname>Bernard</surname><given-names>M</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name></person-group><article-title>A physical map of the 1-gigabase bread wheat chromosome 3B</article-title><source>Science</source><year>2008</year><volume>322</volume><fpage>101</fpage><lpage>104</lpage><pub-id pub-id-type="doi">10.1126/science.1161847</pub-id><pub-id pub-id-type="pmid">18832645</pub-id></mixed-citation></ref><ref id="CR71"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Faure</surname><given-names>S</given-names></name><name><surname>Choulet</surname><given-names>F</given-names></name><name><surname>Roger</surname><given-names>D</given-names></name><name><surname>Gauthier</surname><given-names>V</given-names></name><name><surname>Martinant</surname><given-names>JP</given-names></name><name><surname>Sourdille</surname><given-names>P</given-names></name><name><surname>Balfourier</surname><given-names>F</given-names></name><name><surname>Paslier</surname><given-names>MC</given-names></name><name><surname>Chauveau</surname><given-names>A</given-names></name><name><surname>Cakir</surname><given-names>M</given-names></name><name><surname>Gandon</surname><given-names>B</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name></person-group><article-title>Insertion site-based polymorphism markers open new perspectives for genome saturation and marker-assisted selection in wheat</article-title><source>Plant Biotechnol J</source><year>2010</year><volume>8</volume><fpage>196</fpage><lpage>210</lpage><pub-id pub-id-type="doi">10.1111/j.1467-7652.2009.00477.x</pub-id><pub-id pub-id-type="pmid">20078842</pub-id></mixed-citation></ref><ref id="CR72"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Sourdille</surname><given-names>P</given-names></name><name><surname>Mackay</surname><given-names>I</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name></person-group><article-title>Sequence-based marker development in wheat: advances and applications to breeding</article-title><source>Biotechnol Adv</source><year>2012</year><volume>30</volume><issue>5</issue><fpage>1071</fpage><lpage>1088</lpage><pub-id pub-id-type="doi">10.1016/j.biotechadv.2011.09.015</pub-id><pub-id pub-id-type="pmid">21989506</pub-id></mixed-citation></ref><ref id="CR73"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Philippe</surname><given-names>R</given-names></name><name><surname>Choulet</surname><given-names>F</given-names></name><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Oeveren</surname><given-names>J</given-names></name><name><surname>Tang</surname><given-names>J</given-names></name><name><surname>Wittenberg</surname><given-names>AH</given-names></name><name><surname>Janssen</surname><given-names>A</given-names></name><name><surname>Eijk</surname><given-names>MJ</given-names></name><name><surname>Stormo</surname><given-names>K</given-names></name><name><surname>Alberti</surname><given-names>A</given-names></name><name><surname>Wincker</surname><given-names>P</given-names></name><name><surname>Akhunov</surname><given-names>E</given-names></name><name><surname>Vossen</surname><given-names>E</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name></person-group><article-title>Whole Genome Profiling provides a robust framework for physical mapping and sequencing in the highly complex and repetitive wheat genome</article-title><source>BMC Genom</source><year>2012</year><volume>13</volume><fpage>47</fpage><pub-id pub-id-type="doi">10.1186/1471-2164-13-47</pub-id></mixed-citation></ref><ref id="CR74"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Poland</surname><given-names>JA</given-names></name><name><surname>Brown</surname><given-names>PJ</given-names></name><name><surname>Sorrells</surname><given-names>ME</given-names></name><name><surname>Jannink</surname><given-names>JL</given-names></name></person-group><article-title>Development of high-density genetic maps for barley and wheat using a novel two-enzyme genotyping-by-sequencing approach</article-title><source>PLoS One</source><year>2012</year><volume>7</volume><fpage>e32253</fpage><pub-id pub-id-type="doi">10.1371/journal.pone.0032253</pub-id><pub-id pub-id-type="pmid">22389690</pub-id></mixed-citation></ref><ref id="CR75"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Quraishi</surname><given-names>UM</given-names></name><name><surname>Abrouk</surname><given-names>M</given-names></name><name><surname>Bolot</surname><given-names>S</given-names></name><name><surname>Pont</surname><given-names>C</given-names></name><name><surname>Throude</surname><given-names>M</given-names></name><name><surname>Guilhot</surname><given-names>N</given-names></name><name><surname>Confolent</surname><given-names>C</given-names></name><name><surname>Bortolini</surname><given-names>F</given-names></name><name><surname>Praud</surname><given-names>S</given-names></name><name><surname>Murigneux</surname><given-names>A</given-names></name><name><surname>Charmet</surname><given-names>G</given-names></name><name><surname>Salse</surname><given-names>J</given-names></name></person-group><article-title>Genomics in cereals: from genome-wide conserved orthologous set (COS) sequences to candidate genes for trait dissection</article-title><source>Funct Integr Genom</source><year>2009</year><volume>9</volume><fpage>473</fpage><lpage>484</lpage><pub-id pub-id-type="doi">10.1007/s10142-009-0129-8</pub-id></mixed-citation></ref><ref id="CR76"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Reif</surname><given-names>JC</given-names></name><name><surname>Gowda</surname><given-names>M</given-names></name><name><surname>Maurer</surname><given-names>HP</given-names></name><name><surname>Longin</surname><given-names>CF</given-names></name><name><surname>Korzun</surname><given-names>V</given-names></name><name><surname>Ebmeyer</surname><given-names>E</given-names></name><name><surname>Bothe</surname><given-names>R</given-names></name><name><surname>Pietsch</surname><given-names>C</given-names></name><name><surname>Würschum</surname><given-names>T</given-names></name></person-group><article-title>Association mapping for quality traits in soft winter wheat</article-title><source>Theor Appl Genet</source><year>2011</year><volume>122</volume><fpage>961</fpage><lpage>970</lpage><pub-id pub-id-type="doi">10.1007/s00122-010-1502-7</pub-id><pub-id pub-id-type="pmid">21153626</pub-id></mixed-citation></ref><ref id="CR77"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Riera-Lizarazu</surname><given-names>O</given-names></name><name><surname>Leonard</surname><given-names>JM</given-names></name><name><surname>Tiwari</surname><given-names>VK</given-names></name><name><surname>Kianian</surname><given-names>SF</given-names></name></person-group><article-title>A method to produce radiation hybrids for the D-genome chromosomes of wheat (<italic>Triticum aestivum</italic> L.)</article-title><source>Cytogenet Genome Res</source><year>2010</year><volume>129</volume><fpage>234</fpage><lpage>240</lpage><pub-id pub-id-type="doi">10.1159/000312723</pub-id><pub-id pub-id-type="pmid">20501975</pub-id></mixed-citation></ref><ref id="CR78"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Rustenholz</surname><given-names>C</given-names></name><name><surname>Hedley</surname><given-names>PE</given-names></name><name><surname>Morris</surname><given-names>J</given-names></name><name><surname>Choulet</surname><given-names>F</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Waugh</surname><given-names>R</given-names></name><name><surname>Paux</surname><given-names>E</given-names></name></person-group><article-title>Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources</article-title><source>BMC Genom</source><year>2010</year><volume>11</volume><fpage>714</fpage><pub-id pub-id-type="doi">10.1186/1471-2164-11-714</pub-id></mixed-citation></ref><ref id="CR79"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Rustenholz</surname><given-names>C</given-names></name><name><surname>Choulet</surname><given-names>F</given-names></name><name><surname>Laugier</surname><given-names>C</given-names></name><name><surname>Safar</surname><given-names>J</given-names></name><name><surname>Simkova</surname><given-names>H</given-names></name><name><surname>Dolezel</surname><given-names>J</given-names></name><name><surname>Magni</surname><given-names>F</given-names></name><name><surname>Scalabrin</surname><given-names>S</given-names></name><name><surname>Cattonaro</surname><given-names>F</given-names></name><name><surname>Vautrin</surname><given-names>S</given-names></name><name><surname>Bellec</surname><given-names>A</given-names></name><name><surname>Berges</surname><given-names>H</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Paux</surname><given-names>E</given-names></name></person-group><article-title>A 3000-loci transcription map of chromosome 3B unravels the structural and functional features of gene islands in hexaploid wheat</article-title><source>Plant Physiol</source><year>2011</year><volume>157</volume><fpage>1596</fpage><lpage>1608</lpage><pub-id pub-id-type="doi">10.1104/pp.111.183921</pub-id><pub-id pub-id-type="pmid">22034626</pub-id></mixed-citation></ref><ref id="CR80"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Safar</surname><given-names>J</given-names></name><name><surname>Bartos</surname><given-names>J</given-names></name><name><surname>Janda</surname><given-names>J</given-names></name><name><surname>Bellec</surname><given-names>A</given-names></name><name><surname>Kubalakova</surname><given-names>M</given-names></name><name><surname>Valarik</surname><given-names>M</given-names></name><name><surname>Pateyron</surname><given-names>S</given-names></name><name><surname>Weiserova</surname><given-names>J</given-names></name><name><surname>Tuskova</surname><given-names>R</given-names></name><name><surname>Chalkova</surname><given-names>J</given-names></name><name><surname>Vrana</surname><given-names>J</given-names></name><name><surname>Simkova</surname><given-names>H</given-names></name><name><surname>Faivre-Rampant</surname><given-names>P</given-names></name><name><surname>Sourdille</surname><given-names>P</given-names></name><name><surname>Caboche</surname><given-names>M</given-names></name><name><surname>Bernard</surname><given-names>M</given-names></name><name><surname>Dolezel</surname><given-names>J</given-names></name><name><surname>Chalhoub</surname><given-names>B</given-names></name></person-group><article-title>Dissecting large and complex genomes: flow sorting and BAC cloning of individual chromosomes from bread wheat</article-title><source>Plant J</source><year>2004</year><volume>39</volume><fpage>960</fpage><lpage>968</lpage><pub-id pub-id-type="doi">10.1111/j.1365-313X.2004.02179.x</pub-id><pub-id pub-id-type="pmid">15341637</pub-id></mixed-citation></ref><ref id="CR81"><mixed-citation publication-type="other">Šafář J, Šimková H, Kubaláková M, Číhalíková J, Suchánková P, Bartoš J, Doležel J (2010) Development of chromosome-specific BAC resources for genomics of bread wheat. Cytogenet Genome Res 1–13. doi:10.1159/000313072</mixed-citation></ref><ref id="CR82"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Saintenac</surname><given-names>C</given-names></name><name><surname>Falque</surname><given-names>M</given-names></name><name><surname>Martin</surname><given-names>OC</given-names></name><name><surname>Paux</surname><given-names>E</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Sourdille</surname><given-names>P</given-names></name></person-group><article-title>Detailed recombination studies along chromosome 3B provide new insights on crossover distribution in wheat (<italic>Triticum aestivum</italic> L.)</article-title><source>Genetics</source><year>2009</year><volume>181</volume><fpage>393</fpage><lpage>403</lpage><pub-id pub-id-type="doi">10.1534/genetics.108.097469</pub-id><pub-id pub-id-type="pmid">19064706</pub-id></mixed-citation></ref><ref id="CR83"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Saintenac</surname><given-names>C</given-names></name><name><surname>Jiang</surname><given-names>D</given-names></name><name><surname>Akhunov</surname><given-names>ED</given-names></name></person-group><article-title>Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome</article-title><source>Genome Biol</source><year>2011</year><volume>12</volume><issue>9</issue><fpage>R88</fpage><pub-id pub-id-type="doi">10.1186/gb-2011-12-9-r88</pub-id><pub-id pub-id-type="pmid">21917144</pub-id></mixed-citation></ref><ref id="CR84"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Salse</surname><given-names>J</given-names></name><name><surname>Abrouk</surname><given-names>M</given-names></name><name><surname>Bolot</surname><given-names>S</given-names></name><name><surname>Guilhot</surname><given-names>N</given-names></name><name><surname>Courcelle</surname><given-names>E</given-names></name><name><surname>Faraut</surname><given-names>T</given-names></name><name><surname>Waugh</surname><given-names>R</given-names></name><name><surname>Close</surname><given-names>TJ</given-names></name><name><surname>Messing</surname><given-names>J</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name></person-group><article-title>Reconstruction of monocotelydoneous proto-chromosomes reveals faster evolution in plants than in animals</article-title><source>Proc Natl Acad Sci U S A</source><year>2009</year><volume>106</volume><fpage>14908</fpage><lpage>14913</lpage><pub-id pub-id-type="doi">10.1073/pnas.0902350106</pub-id><pub-id pub-id-type="pmid">19706486</pub-id></mixed-citation></ref><ref id="CR85"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Schnable</surname><given-names>PS</given-names></name><name><surname>Ware</surname><given-names>D</given-names></name><name><surname>Fulton</surname><given-names>RS</given-names></name><name><surname>Stein</surname><given-names>JC</given-names></name><name><surname>Wei</surname><given-names>F</given-names></name><name><surname>Pasternak</surname><given-names>S</given-names></name><name><surname>Liang</surname><given-names>C</given-names></name><name><surname>Zhang</surname><given-names>J</given-names></name><name><surname>Fulton</surname><given-names>L</given-names></name><name><surname>Graves</surname><given-names>TA</given-names></name><name><surname>Minx</surname><given-names>P</given-names></name><name><surname>Reily</surname><given-names>AD</given-names></name><name><surname>Courtney</surname><given-names>L</given-names></name><name><surname>Kruchowski</surname><given-names>SS</given-names></name><name><surname>Tomlinson</surname><given-names>C</given-names></name><name><surname>Strong</surname><given-names>C</given-names></name><name><surname>Delehaunty</surname><given-names>K</given-names></name><name><surname>Fronick</surname><given-names>C</given-names></name><name><surname>Courtney</surname><given-names>B</given-names></name><name><surname>Rock</surname><given-names>SM</given-names></name><name><surname>Belter</surname><given-names>E</given-names></name><name><surname>Du</surname><given-names>F</given-names></name><name><surname>Kim</surname><given-names>K</given-names></name><name><surname>Abbott</surname><given-names>RM</given-names></name><name><surname>Cotton</surname><given-names>M</given-names></name><name><surname>Levy</surname><given-names>A</given-names></name><name><surname>Marchetto</surname><given-names>P</given-names></name><name><surname>Ochoa</surname><given-names>K</given-names></name><name><surname>Jackson</surname><given-names>SM</given-names></name><name><surname>Gillam</surname><given-names>B</given-names></name><name><surname>Chen</surname><given-names>W</given-names></name><name><surname>Yan</surname><given-names>L</given-names></name><name><surname>Higginbotham</surname><given-names>J</given-names></name><name><surname>Cardenas</surname><given-names>M</given-names></name><name><surname>Waligorski</surname><given-names>J</given-names></name><name><surname>Applebaum</surname><given-names>E</given-names></name><name><surname>Phelps</surname><given-names>L</given-names></name><name><surname>Falcone</surname><given-names>J</given-names></name><name><surname>Kanchi</surname><given-names>K</given-names></name><name><surname>Thane</surname><given-names>T</given-names></name><name><surname>Scimone</surname><given-names>A</given-names></name><name><surname>Thane</surname><given-names>N</given-names></name><name><surname>Henke</surname><given-names>J</given-names></name><name><surname>Wang</surname><given-names>T</given-names></name><name><surname>Ruppert</surname><given-names>J</given-names></name><name><surname>Shah</surname><given-names>N</given-names></name><name><surname>Rotter</surname><given-names>K</given-names></name><name><surname>Hodges</surname><given-names>J</given-names></name><name><surname>Ingenthron</surname><given-names>E</given-names></name><name><surname>Cordes</surname><given-names>M</given-names></name><name><surname>Kohlberg</surname><given-names>S</given-names></name><name><surname>Sgro</surname><given-names>J</given-names></name><name><surname>Delgado</surname><given-names>B</given-names></name><name><surname>Mead</surname><given-names>K</given-names></name><name><surname>Chinwalla</surname><given-names>A</given-names></name><name><surname>Leonard</surname><given-names>S</given-names></name><name><surname>Crouse</surname><given-names>K</given-names></name><name><surname>Collura</surname><given-names>K</given-names></name><name><surname>Kudrna</surname><given-names>D</given-names></name><name><surname>Currie</surname><given-names>J</given-names></name><name><surname>He</surname><given-names>R</given-names></name><name><surname>Angelova</surname><given-names>A</given-names></name><name><surname>Rajasekar</surname><given-names>S</given-names></name><name><surname>Mueller</surname><given-names>T</given-names></name><name><surname>Lomeli</surname><given-names>R</given-names></name><name><surname>Scara</surname><given-names>G</given-names></name><name><surname>Ko</surname><given-names>A</given-names></name><name><surname>Delaney</surname><given-names>K</given-names></name><name><surname>Wissotski</surname><given-names>M</given-names></name><name><surname>Lopez</surname><given-names>G</given-names></name><name><surname>Campos</surname><given-names>D</given-names></name><name><surname>Braidotti</surname><given-names>M</given-names></name><name><surname>Ashley</surname><given-names>E</given-names></name><name><surname>Golser</surname><given-names>W</given-names></name><name><surname>Kim</surname><given-names>H</given-names></name><name><surname>Lee</surname><given-names>S</given-names></name><name><surname>Lin</surname><given-names>J</given-names></name><name><surname>Dujmic</surname><given-names>Z</given-names></name><name><surname>Kim</surname><given-names>W</given-names></name><name><surname>Talag</surname><given-names>J</given-names></name><name><surname>Zuccolo</surname><given-names>A</given-names></name><name><surname>Fan</surname><given-names>C</given-names></name><name><surname>Sebastian</surname><given-names>A</given-names></name><name><surname>Kramer</surname><given-names>M</given-names></name><name><surname>Spiegel</surname><given-names>L</given-names></name><name><surname>Nascimento</surname><given-names>L</given-names></name><name><surname>Zutavern</surname><given-names>T</given-names></name><name><surname>Miller</surname><given-names>B</given-names></name><name><surname>Ambroise</surname><given-names>C</given-names></name><name><surname>Muller</surname><given-names>S</given-names></name><name><surname>Spooner</surname><given-names>W</given-names></name><name><surname>Narechania</surname><given-names>A</given-names></name><name><surname>Ren</surname><given-names>L</given-names></name><name><surname>Wei</surname><given-names>S</given-names></name><name><surname>Kumari</surname><given-names>S</given-names></name><name><surname>Faga</surname><given-names>B</given-names></name><name><surname>Levy</surname><given-names>MJ</given-names></name><name><surname>McMahan</surname><given-names>L</given-names></name><name><surname>Buren</surname><given-names>P</given-names></name><name><surname>Vaughn</surname><given-names>MW</given-names></name><etal></etal></person-group><article-title>The B73 maize genome: complexity, diversity, and dynamics</article-title><source>Science</source><year>2009</year><volume>326</volume><fpage>1112</fpage><lpage>1115</lpage><pub-id pub-id-type="doi">10.1126/science.1178534</pub-id><pub-id pub-id-type="pmid">19965430</pub-id></mixed-citation></ref><ref id="CR86"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Schulte</surname><given-names>D</given-names></name><name><surname>Ariyadasa</surname><given-names>R</given-names></name><name><surname>Shi</surname><given-names>B</given-names></name><name><surname>Fleury</surname><given-names>D</given-names></name><name><surname>Saski</surname><given-names>C</given-names></name><name><surname>Atkins</surname><given-names>M</given-names></name><name><surname>Jong</surname><given-names>P</given-names></name><name><surname>Wu</surname><given-names>CC</given-names></name><name><surname>Graner</surname><given-names>A</given-names></name><name><surname>Langridge</surname><given-names>P</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name></person-group><article-title>BAC library resources for map-based cloning and physical map construction in barley (<italic>Hordeum vulgare</italic> L.)</article-title><source>BMC Genom</source><year>2011</year><volume>12</volume><fpage>247</fpage><pub-id pub-id-type="doi">10.1186/1471-2164-12-247</pub-id></mixed-citation></ref><ref id="CR87"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Soderlund</surname><given-names>C</given-names></name><name><surname>Humphray</surname><given-names>S</given-names></name><name><surname>Dunham</surname><given-names>A</given-names></name><name><surname>French</surname><given-names>L</given-names></name></person-group><article-title>Contigs built with fingerprints, markers, and FPC V4.7</article-title><source>Genome Res</source><year>2000</year><volume>10</volume><fpage>1772</fpage><lpage>1787</lpage><pub-id pub-id-type="doi">10.1101/gr.GR-1375R</pub-id><pub-id pub-id-type="pmid">11076862</pub-id></mixed-citation></ref><ref id="CR88"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Sorrells</surname><given-names>ME</given-names></name><name><surname>Gustafson</surname><given-names>JP</given-names></name><name><surname>Somers</surname><given-names>D</given-names></name><name><surname>Chao</surname><given-names>S</given-names></name><name><surname>Benscher</surname><given-names>D</given-names></name><name><surname>Guedira-Brown</surname><given-names>G</given-names></name><name><surname>Huttner</surname><given-names>E</given-names></name><name><surname>Kilian</surname><given-names>A</given-names></name><name><surname>McGuire</surname><given-names>PE</given-names></name><name><surname>Ross</surname><given-names>K</given-names></name><name><surname>Tanaka</surname><given-names>J</given-names></name><name><surname>Wenzl</surname><given-names>P</given-names></name><name><surname>Williams</surname><given-names>K</given-names></name><name><surname>Qualset</surname><given-names>CO</given-names></name></person-group><article-title>Reconstruction of the synthetic W7984 x Opata M85 wheat reference population</article-title><source>Genome</source><year>2011</year><volume>54</volume><fpage>875</fpage><lpage>882</lpage><pub-id pub-id-type="doi">10.1139/g11-054</pub-id><pub-id pub-id-type="pmid">21999208</pub-id></mixed-citation></ref><ref id="CR89"><mixed-citation publication-type="book"><person-group person-group-type="author"><name><surname>Stein</surname><given-names>N</given-names></name><name><surname>Graner</surname><given-names>A</given-names></name></person-group><person-group person-group-type="editor"><name><surname>Gupta</surname><given-names>P</given-names></name><name><surname>Varshney</surname><given-names>R</given-names></name></person-group><article-title>Map-based gene isolation in cereal genomes</article-title><source>Cereal genomics</source><year>2004</year><publisher-loc>Dordrecht</publisher-loc><publisher-name>Kluwer</publisher-name><fpage>331</fpage><lpage>360</lpage></mixed-citation></ref><ref id="CR90"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Sutton</surname><given-names>T</given-names></name><name><surname>Baumann</surname><given-names>U</given-names></name><name><surname>Hayes</surname><given-names>J</given-names></name><name><surname>Collins</surname><given-names>NC</given-names></name><name><surname>Shi</surname><given-names>BJ</given-names></name><name><surname>Schnurbusch</surname><given-names>T</given-names></name><name><surname>Hay</surname><given-names>A</given-names></name><name><surname>Mayo</surname><given-names>G</given-names></name><name><surname>Pallotta</surname><given-names>M</given-names></name><name><surname>Tester</surname><given-names>M</given-names></name><name><surname>Langridge</surname><given-names>P</given-names></name></person-group><article-title>Boron-toxicity tolerance in barley arising from efflux transporter amplification</article-title><source>Science</source><year>2007</year><volume>318</volume><fpage>1446</fpage><lpage>1449</lpage><pub-id pub-id-type="doi">10.1126/science.1146853</pub-id><pub-id pub-id-type="pmid">18048688</pub-id></mixed-citation></ref><ref id="CR91"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Taketa</surname><given-names>S</given-names></name><name><surname>Amano</surname><given-names>S</given-names></name><name><surname>Tsujino</surname><given-names>Y</given-names></name><name><surname>Sato</surname><given-names>T</given-names></name><name><surname>Saisho</surname><given-names>D</given-names></name><name><surname>Kakeda</surname><given-names>K</given-names></name><name><surname>Nomura</surname><given-names>M</given-names></name><name><surname>Suzuki</surname><given-names>T</given-names></name><name><surname>Matsumoto</surname><given-names>T</given-names></name><name><surname>Sato</surname><given-names>K</given-names></name><name><surname>Kanamori</surname><given-names>H</given-names></name><name><surname>Kawasaki</surname><given-names>S</given-names></name><name><surname>Takeda</surname><given-names>K</given-names></name></person-group><article-title>Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway</article-title><source>Proc Natl Acad Sci U S A</source><year>2008</year><volume>105</volume><issue>10</issue><fpage>4062</fpage><lpage>4067</lpage><pub-id pub-id-type="doi">10.1073/pnas.0711034105</pub-id><pub-id pub-id-type="pmid">18316719</pub-id></mixed-citation></ref><ref id="CR92"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Talamè</surname><given-names>V</given-names></name><name><surname>Bovina</surname><given-names>R</given-names></name><name><surname>Sanguineti</surname><given-names>MC</given-names></name><name><surname>Tuberosa</surname><given-names>R</given-names></name><name><surname>Lundqvist</surname><given-names>U</given-names></name><name><surname>Salvi</surname><given-names>S</given-names></name></person-group><article-title>TILLMore, a resource for the discovery of chemically induced mutants in barley</article-title><source>Plant Biotechnol J</source><year>2008</year><volume>6</volume><fpage>477</fpage><lpage>485</lpage><pub-id pub-id-type="doi">10.1111/j.1467-7652.2008.00341.x</pub-id><pub-id pub-id-type="pmid">18422888</pub-id></mixed-citation></ref><ref id="CR93"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Tsai</surname><given-names>H</given-names></name><name><surname>Howell</surname><given-names>T</given-names></name><name><surname>Nitcher</surname><given-names>R</given-names></name><name><surname>Missirian</surname><given-names>V</given-names></name><name><surname>Watson</surname><given-names>B</given-names></name><name><surname>Ngo</surname><given-names>KJ</given-names></name><name><surname>Lieberman</surname><given-names>M</given-names></name><name><surname>Fass</surname><given-names>J</given-names></name><name><surname>Uauy</surname><given-names>C</given-names></name><name><surname>Tran</surname><given-names>RK</given-names></name><name><surname>Khan</surname><given-names>AA</given-names></name><name><surname>Filkov</surname><given-names>V</given-names></name><name><surname>Tai</surname><given-names>TH</given-names></name><name><surname>Dubcovsky</surname><given-names>J</given-names></name><name><surname>Comai</surname><given-names>L</given-names></name></person-group><article-title>Discovery of rare mutations in populations: TILLING by sequencing</article-title><source>Plant Physiol</source><year>2011</year><volume>156</volume><fpage>1257</fpage><lpage>1268</lpage><pub-id pub-id-type="doi">10.1104/pp.110.169748</pub-id><pub-id pub-id-type="pmid">21531898</pub-id></mixed-citation></ref><ref id="CR94"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Turner</surname><given-names>A</given-names></name><name><surname>Beales</surname><given-names>J</given-names></name><name><surname>Faure</surname><given-names>S</given-names></name><name><surname>Dunford</surname><given-names>RP</given-names></name><name><surname>Laurie</surname><given-names>DA</given-names></name></person-group><article-title>The pseudo-response regulator Ppd-H1 provides adaptation to photoperiod in barley</article-title><source>Science</source><year>2005</year><volume>310</volume><issue>5750</issue><fpage>1031</fpage><lpage>1034</lpage><pub-id pub-id-type="doi">10.1126/science.1117619</pub-id><pub-id pub-id-type="pmid">16284181</pub-id></mixed-citation></ref><ref id="CR95"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Oeveren</surname><given-names>J</given-names></name><name><surname>Ruiter</surname><given-names>M</given-names></name><name><surname>Jesse</surname><given-names>T</given-names></name><name><surname>Poel</surname><given-names>H</given-names></name><name><surname>Tang</surname><given-names>JF</given-names></name><name><surname>Yalcin</surname><given-names>F</given-names></name><name><surname>Janssen</surname><given-names>A</given-names></name><name><surname>Volpin</surname><given-names>H</given-names></name><name><surname>Stormo</surname><given-names>KE</given-names></name><name><surname>Bogden</surname><given-names>R</given-names></name><etal></etal></person-group><article-title>Sequence-based physical mapping of complex genomes by whole genome profiling</article-title><source>Genome Res</source><year>2011</year><volume>21</volume><fpage>618</fpage><lpage>625</lpage><pub-id pub-id-type="doi">10.1101/gr.112094.110</pub-id><pub-id pub-id-type="pmid">21324881</pub-id></mixed-citation></ref><ref id="CR96"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Wicker</surname><given-names>T</given-names></name><name><surname>Mayer</surname><given-names>KF</given-names></name><name><surname>Gundlach</surname><given-names>H</given-names></name><name><surname>Martis</surname><given-names>M</given-names></name><name><surname>Steuernagel</surname><given-names>B</given-names></name><name><surname>Scholz</surname><given-names>U</given-names></name><name><surname>Simková</surname><given-names>H</given-names></name><name><surname>Kubaláková</surname><given-names>M</given-names></name><name><surname>Choulet</surname><given-names>F</given-names></name><name><surname>Taudien</surname><given-names>S</given-names></name><name><surname>Platzer</surname><given-names>M</given-names></name><name><surname>Feuillet</surname><given-names>C</given-names></name><name><surname>Fahima</surname><given-names>T</given-names></name><name><surname>Budak</surname><given-names>H</given-names></name><name><surname>Dolezel</surname><given-names>J</given-names></name><name><surname>Keller</surname><given-names>B</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name></person-group><article-title>Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives</article-title><source>Plant Cell</source><year>2011</year><volume>23</volume><fpage>1706</fpage><lpage>1718</lpage><pub-id pub-id-type="doi">10.1105/tpc.111.086629</pub-id><pub-id pub-id-type="pmid">21622801</pub-id></mixed-citation></ref><ref id="CR97"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Winfield</surname><given-names>MO</given-names></name><name><surname>Wilkinson</surname><given-names>PA</given-names></name><name><surname>Allen</surname><given-names>AM</given-names></name><name><surname>Barker</surname><given-names>GL</given-names></name><name><surname>Coghill</surname><given-names>JA</given-names></name><name><surname>Burridge</surname><given-names>A</given-names></name><name><surname>Hall</surname><given-names>A</given-names></name><name><surname>Brenchley</surname><given-names>RC</given-names></name><name><surname>D’Amore</surname><given-names>R</given-names></name><name><surname>Hall</surname><given-names>N</given-names></name><name><surname>Bevan</surname><given-names>MW</given-names></name><name><surname>Richmond</surname><given-names>T</given-names></name><name><surname>Gerhardt</surname><given-names>DJ</given-names></name><name><surname>Jeddeloh</surname><given-names>JA</given-names></name><name><surname>Edwards</surname><given-names>KJ</given-names></name></person-group><article-title>Targeted re-sequencing of the allohexaploid wheat exome</article-title><source>Plant Biotechnol J</source><year>2012</year><volume>10</volume><fpage>733</fpage><lpage>742</lpage><pub-id pub-id-type="doi">10.1111/j.1467-7652.2012.00713.x</pub-id><pub-id pub-id-type="pmid">22703335</pub-id></mixed-citation></ref><ref id="CR98"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Xia</surname><given-names>Y</given-names></name><name><surname>Ning</surname><given-names>Z</given-names></name><name><surname>Bai</surname><given-names>G</given-names></name><name><surname>Li</surname><given-names>R</given-names></name><name><surname>Yan</surname><given-names>G</given-names></name><name><surname>Siddique</surname><given-names>KH</given-names></name><name><surname>Baum</surname><given-names>M</given-names></name><name><surname>Guo</surname><given-names>P</given-names></name></person-group><article-title>Allelic variations of a light harvesting chlorophyll a/b-binding protein gene (Lhcb1) associated with agronomic traits in barley</article-title><source>PLoS One</source><year>2012</year><volume>7</volume><issue>5</issue><fpage>e37573</fpage><pub-id pub-id-type="doi">10.1371/journal.pone.0037573</pub-id><pub-id pub-id-type="pmid">22662173</pub-id></mixed-citation></ref><ref id="CR99"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Yan</surname><given-names>L</given-names></name><name><surname>Loukoianov</surname><given-names>A</given-names></name><name><surname>Tranquilli</surname><given-names>G</given-names></name><name><surname>Helguera</surname><given-names>M</given-names></name><name><surname>Fahima</surname><given-names>T</given-names></name><name><surname>Dubcovsky</surname><given-names>J</given-names></name></person-group><article-title>Positional cloning of wheat vernalization gene VRN1</article-title><source>Proc Natl Acad Sci U S A</source><year>2003</year><volume>100</volume><fpage>6263</fpage><lpage>6268</lpage><pub-id pub-id-type="doi">10.1073/pnas.0937399100</pub-id><pub-id pub-id-type="pmid">12730378</pub-id></mixed-citation></ref><ref id="CR100"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Yan</surname><given-names>L</given-names></name><name><surname>Loukoianov</surname><given-names>A</given-names></name><name><surname>Blechl</surname><given-names>A</given-names></name><name><surname>Tranquilli</surname><given-names>G</given-names></name><name><surname>Ramakrishna</surname><given-names>W</given-names></name><name><surname>SanMiguel</surname><given-names>P</given-names></name><name><surname>Bennetzen</surname><given-names>JL</given-names></name><name><surname>Echenique</surname><given-names>V</given-names></name><name><surname>Dubcovsky</surname><given-names>J</given-names></name></person-group><article-title>The wheat VRN2 gene is a flowering repressor down-regulated by vernalization</article-title><source>Science</source><year>2004</year><volume>303</volume><fpage>1640</fpage><lpage>1644</lpage><pub-id pub-id-type="doi">10.1126/science.1094305</pub-id><pub-id pub-id-type="pmid">15016992</pub-id></mixed-citation></ref><ref id="CR101"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Yan</surname><given-names>L</given-names></name><name><surname>Fu</surname><given-names>D</given-names></name><name><surname>Li</surname><given-names>C</given-names></name><name><surname>Blechl</surname><given-names>A</given-names></name><name><surname>Tranquilli</surname><given-names>G</given-names></name><name><surname>Bonafede</surname><given-names>M</given-names></name><name><surname>Sanchez</surname><given-names>A</given-names></name><name><surname>Valarik</surname><given-names>M</given-names></name><name><surname>Yasuda</surname><given-names>S</given-names></name><name><surname>Dubcovsky</surname><given-names>J</given-names></name></person-group><article-title>The wheat and barley vernalization gene VRN3 is an orthologue of FT</article-title><source>Proc Natl Acad Sci U S A</source><year>2006</year><volume>103</volume><fpage>19581</fpage><lpage>19586</lpage><pub-id pub-id-type="doi">10.1073/pnas.0607142103</pub-id><pub-id pub-id-type="pmid">17158798</pub-id></mixed-citation></ref><ref id="CR102"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Yoshida</surname><given-names>T</given-names></name><name><surname>Nishida</surname><given-names>H</given-names></name><name><surname>Zhu</surname><given-names>J</given-names></name><name><surname>Nitcher</surname><given-names>R</given-names></name><name><surname>Distelfeld</surname><given-names>A</given-names></name><name><surname>Akashi</surname><given-names>Y</given-names></name><name><surname>Kato</surname><given-names>K</given-names></name><name><surname>Dubcovsky</surname><given-names>J</given-names></name></person-group><article-title>Vrn-D4 is a vernalization gene located on the centromeric region of chromosome 5D in hexaploid wheat</article-title><source>Theor Appl Genet</source><year>2010</year><volume>120</volume><fpage>543</fpage><lpage>552</lpage><pub-id pub-id-type="doi">10.1007/s00122-009-1174-3</pub-id><pub-id pub-id-type="pmid">19847391</pub-id></mixed-citation></ref><ref id="CR103"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Yuo</surname><given-names>T</given-names></name><name><surname>Yamashita</surname><given-names>Y</given-names></name><name><surname>Kanamori</surname><given-names>H</given-names></name><name><surname>Matsumoto</surname><given-names>T</given-names></name><name><surname>Lundqvist</surname><given-names>U</given-names></name><name><surname>Sato</surname><given-names>K</given-names></name><name><surname>Ichii</surname><given-names>M</given-names></name><name><surname>Jobling</surname><given-names>SA</given-names></name><name><surname>Taketa</surname><given-names>S</given-names></name></person-group><article-title>A short internodes (SHI) family transcription factor gene regulates awn elongation and pistil morphology in barley</article-title><source>J Exp Bot</source><year>2012</year><volume>63</volume><issue>14</issue><fpage>5223</fpage><lpage>5232</lpage><pub-id pub-id-type="doi">10.1093/jxb/ers182</pub-id><pub-id pub-id-type="pmid">22791834</pub-id></mixed-citation></ref><ref id="CR104"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname><given-names>H</given-names></name><name><surname>Sreenivasulu</surname><given-names>N</given-names></name><name><surname>Weschke</surname><given-names>W</given-names></name><name><surname>Stein</surname><given-names>N</given-names></name><name><surname>Rudd</surname><given-names>S</given-names></name><name><surname>Radchuk</surname><given-names>V</given-names></name><name><surname>Potokina</surname><given-names>E</given-names></name><name><surname>Scholz</surname><given-names>U</given-names></name><name><surname>Schweizer</surname><given-names>P</given-names></name><name><surname>Zierold</surname><given-names>U</given-names></name><name><surname>Langridge</surname><given-names>P</given-names></name><name><surname>Varshney</surname><given-names>RK</given-names></name><name><surname>Wobus</surname><given-names>U</given-names></name><name><surname>Graner</surname><given-names>A</given-names></name></person-group><article-title>Large-scale analysis of the barley transcriptome based on expressed sequence tags</article-title><source>Plant J</source><year>2004</year><volume>40</volume><fpage>276</fpage><lpage>290</lpage><pub-id pub-id-type="doi">10.1111/j.1365-313X.2004.02209.x</pub-id><pub-id pub-id-type="pmid">15447653</pub-id></mixed-citation></ref><ref id="CR105"><mixed-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname><given-names>G</given-names></name><name><surname>Liu</surname><given-names>X</given-names></name><name><surname>Quan</surname><given-names>Z</given-names></name><name><surname>Cheng</surname><given-names>S</given-names></name><name><surname>Xu</surname><given-names>X</given-names></name><name><surname>Pan</surname><given-names>S</given-names></name><name><surname>Xie</surname><given-names>M</given-names></name><name><surname>Zeng</surname><given-names>P</given-names></name><name><surname>Yue</surname><given-names>Z</given-names></name><name><surname>Wang</surname><given-names>W</given-names></name><name><surname>Tao</surname><given-names>Y</given-names></name><name><surname>Bian</surname><given-names>C</given-names></name><name><surname>Han</surname><given-names>C</given-names></name><name><surname>Xia</surname><given-names>Q</given-names></name><name><surname>Peng</surname><given-names>X</given-names></name><name><surname>Cao</surname><given-names>R</given-names></name><name><surname>Yang</surname><given-names>X</given-names></name><name><surname>Zhan</surname><given-names>D</given-names></name><name><surname>Hu</surname><given-names>J</given-names></name><name><surname>Zhang</surname><given-names>Y</given-names></name><name><surname>Li</surname><given-names>H</given-names></name><name><surname>Li</surname><given-names>H</given-names></name><name><surname>Li</surname><given-names>N</given-names></name><name><surname>Wang</surname><given-names>J</given-names></name><name><surname>Wang</surname><given-names>C</given-names></name><name><surname>Wang</surname><given-names>R</given-names></name><name><surname>Guo</surname><given-names>T</given-names></name><name><surname>Cai</surname><given-names>Y</given-names></name><name><surname>Liu</surname><given-names>C</given-names></name><name><surname>Xiang</surname><given-names>H</given-names></name><name><surname>Shi</surname><given-names>Q</given-names></name><name><surname>Huang</surname><given-names>P</given-names></name><name><surname>Chen</surname><given-names>Q</given-names></name><name><surname>Li</surname><given-names>Y</given-names></name><name><surname>Wang</surname><given-names>J</given-names></name><name><surname>Zhao</surname><given-names>Z</given-names></name><name><surname>Wang</surname><given-names>J</given-names></name></person-group><article-title>Genome sequence of foxtail millet (<italic>Setaria italica</italic>) provides insights into grass evolution and biofuel potential</article-title><source>Nat Biotech</source><year>2012</year><volume>30</volume><fpage>549</fpage><lpage>554</lpage><pub-id pub-id-type="doi">10.1038/nbt.2195</pub-id></mixed-citation></ref></ref-list></back></pmc></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Asie/explor/AustralieFrV1/Data/Pmc/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000E88 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Pmc/Corpus/biblio.hfd -nk 000E88 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Asie
|area= AustralieFrV1
|flux= Pmc
|étape= Corpus
|type= RBID
|clé= PMC:3508266
|texte= Integrating cereal genomics to support innovation in the Triticeae
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Pmc/Corpus/RBID.i -Sk "pubmed:23161406" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Pmc/Corpus/biblio.hfd \
| NlmPubMed2Wicri -a AustralieFrV1
| This area was generated with Dilib version V0.6.33. |  |