Aminomonas paucivorans gen. nov., sp. nov., a mesophilic, anaerobic, amino-acid-utilizing bacterium
Identifieur interne : 006D62 ( PascalFrancis/Curation ); précédent : 006D61; suivant : 006D63Aminomonas paucivorans gen. nov., sp. nov., a mesophilic, anaerobic, amino-acid-utilizing bacterium
Auteurs : S. Baena [France, Colombie] ; M.-L. Fardeau [France] ; B. Ollivier [France] ; M. Labat [France] ; P. Thomas [France] ; J.-L. Garcia [France, Australie] ; B. K. C. Patel [Australie]Source :
- International journal of systematic bacteriology [ 0020-7713 ] ; 1999.
Descripteurs français
- Pascal (Inist)
English descriptors
- KwdEn :
Abstract
A novel, asaccharolytic, amino-acid-degrading bacterium, designated strain GLU-3T, was isolated from an anaerobic lagoon of a dairy wastewater treatment plant. Strain GLU-3T stained Gram-negative and was an obligately anaerobic, non-spore-forming, slightly curved, rod-shaped bacterium (0.3 × 4.0-6.0 μm) which existed singly or in pairs. The DNA G+C content was 43 mol%. Optimum growth occurred at 35 °C and pH 7.5 on arginine with a generation time of 16 h. Good growth was obtained on arginine, histidine, threonine and glycine. Acetate was the end-product formed from all these substrates, but in addition, a trace of formate was detected from arginine and histidine, and ornithine was produced from arginine. Strain GLU-3T grew slowly on glutamate and produced acetate, carbon dioxide, formate, hydrogen and traces of propionate as the end-products. In syntrophic association with Methanobacterium formicicum, strain GLU-3T oxidized arginine, histidine and glutamate to give propionate as the major product; acetate, carbon dioxide and methane were also produced. Strain GLU-3T did not degrade alanine and the branched-chain amino acids valine, leucine and isoleucine either in pure culture or in association with M. formicicum. The nearest phylogenetic relative of strain GLU-3T was the thermophile Selenomonas acidaminovorans (similarity value of 89.5%). As strain GLU-3T is phylogenetically, physiologically and genotypically different from other amino-acid-degrading genera, it is proposed that it should be designated a new species of a new genus Aminomonas paucivorans gen. nov., sp. nov. (DSM 12260T).
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en" level="a">Aminomonas paucivorans gen. nov., sp. nov., a mesophilic, anaerobic, amino-acid-utilizing bacterium</title><author><name sortKey="Baena, S" sort="Baena, S" uniqKey="Baena S" first="S." last="Baena">S. Baena</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="02"><s1>Departamento de Biologia, Pontificia Universidad Javeriana, POB 56710</s1><s2>SantaFe de Bogota</s2><s3>COL</s3><sZ>1 aut.</sZ></inist:fA14><country>Colombie</country></affiliation></author><author><name sortKey="Fardeau, M L" sort="Fardeau, M L" uniqKey="Fardeau M" first="M.-L." last="Fardeau">M.-L. Fardeau</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Ollivier, B" sort="Ollivier, B" uniqKey="Ollivier B" first="B." last="Ollivier">B. Ollivier</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Labat, M" sort="Labat, M" uniqKey="Labat M" first="M." last="Labat">M. Labat</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Thomas, P" sort="Thomas, P" uniqKey="Thomas P" first="P." last="Thomas">P. Thomas</name><affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Département de Biologie, Université de la Mediterranée</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>5 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Garcia, J L" sort="Garcia, J L" uniqKey="Garcia J" first="J.-L." last="Garcia">J.-L. Garcia</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="04"><s1>School of Biomolecular and Biomedical Sciences, Faculty of Science and Technology, Griffith University</s1><s2>Nathan, Brisbane 4111</s2><s3>AUS</s3><sZ>6 aut.</sZ><sZ>7 aut.</sZ></inist:fA14><country>Australie</country></affiliation></author><author><name sortKey="Patel, B K C" sort="Patel, B K C" uniqKey="Patel B" first="B. K. C." last="Patel">B. K. C. Patel</name><affiliation wicri:level="1"><inist:fA14 i1="04"><s1>School of Biomolecular and Biomedical Sciences, Faculty of Science and Technology, Griffith University</s1><s2>Nathan, Brisbane 4111</s2><s3>AUS</s3><sZ>6 aut.</sZ><sZ>7 aut.</sZ></inist:fA14><country>Australie</country></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">INIST</idno><idno type="inist">99-0402006</idno><date when="1999">1999</date><idno type="stanalyst">PASCAL 99-0402006 INIST</idno><idno type="RBID">Pascal:99-0402006</idno><idno type="wicri:Area/PascalFrancis/Corpus">006292</idno><idno type="wicri:Area/PascalFrancis/Curation">006D62</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a">Aminomonas paucivorans gen. nov., sp. nov., a mesophilic, anaerobic, amino-acid-utilizing bacterium</title><author><name sortKey="Baena, S" sort="Baena, S" uniqKey="Baena S" first="S." last="Baena">S. Baena</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="02"><s1>Departamento de Biologia, Pontificia Universidad Javeriana, POB 56710</s1><s2>SantaFe de Bogota</s2><s3>COL</s3><sZ>1 aut.</sZ></inist:fA14><country>Colombie</country></affiliation></author><author><name sortKey="Fardeau, M L" sort="Fardeau, M L" uniqKey="Fardeau M" first="M.-L." last="Fardeau">M.-L. Fardeau</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Ollivier, B" sort="Ollivier, B" uniqKey="Ollivier B" first="B." last="Ollivier">B. Ollivier</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Labat, M" sort="Labat, M" uniqKey="Labat M" first="M." last="Labat">M. Labat</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Thomas, P" sort="Thomas, P" uniqKey="Thomas P" first="P." last="Thomas">P. Thomas</name><affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Département de Biologie, Université de la Mediterranée</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>5 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Garcia, J L" sort="Garcia, J L" uniqKey="Garcia J" first="J.-L." last="Garcia">J.-L. Garcia</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>France</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="04"><s1>School of Biomolecular and Biomedical Sciences, Faculty of Science and Technology, Griffith University</s1><s2>Nathan, Brisbane 4111</s2><s3>AUS</s3><sZ>6 aut.</sZ><sZ>7 aut.</sZ></inist:fA14><country>Australie</country></affiliation></author><author><name sortKey="Patel, B K C" sort="Patel, B K C" uniqKey="Patel B" first="B. K. C." last="Patel">B. K. C. Patel</name><affiliation wicri:level="1"><inist:fA14 i1="04"><s1>School of Biomolecular and Biomedical Sciences, Faculty of Science and Technology, Griffith University</s1><s2>Nathan, Brisbane 4111</s2><s3>AUS</s3><sZ>6 aut.</sZ><sZ>7 aut.</sZ></inist:fA14><country>Australie</country></affiliation></author></analytic><series><title level="j" type="main">International journal of systematic bacteriology</title><title level="j" type="abbreviated">Int. j. syst. bacteriol.</title><idno type="ISSN">0020-7713</idno><imprint><date when="1999">1999</date></imprint></series></biblStruct></sourceDesc><seriesStmt><title level="j" type="main">International journal of systematic bacteriology</title><title level="j" type="abbreviated">Int. j. syst. bacteriol.</title><idno type="ISSN">0020-7713</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Aminoacid</term><term>Anaerobe</term><term>Catabolism</term><term>Characterization</term><term>Description</term><term>Genotype</term><term>Mesophily</term><term>New genus</term><term>New species</term><term>Phenotype</term><term>Phylogeny</term></keywords><keywords scheme="Pascal" xml:lang="fr"><term>Aminoacide</term><term>Catabolisme</term><term>Genre nouveau</term><term>Espèce nouvelle</term><term>Mésophilie</term><term>Anaérobie</term><term>Caractérisation</term><term>Phénotype</term><term>Génotype</term><term>Phylogenèse</term><term>Description</term><term>Aminomonas paucivorans</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A novel, asaccharolytic, amino-acid-degrading bacterium, designated strain GLU-3<sup>T</sup>, was isolated from an anaerobic lagoon of a dairy wastewater treatment plant. Strain GLU-3<sup>T</sup> stained Gram-negative and was an obligately anaerobic, non-spore-forming, slightly curved, rod-shaped bacterium (0.3 × 4.0-6.0 μm) which existed singly or in pairs. The DNA G+C content was 43 mol%. Optimum growth occurred at 35 °C and pH 7.5 on arginine with a generation time of 16 h. Good growth was obtained on arginine, histidine, threonine and glycine. Acetate was the end-product formed from all these substrates, but in addition, a trace of formate was detected from arginine and histidine, and ornithine was produced from arginine. Strain GLU-3<sup>T</sup> grew slowly on glutamate and produced acetate, carbon dioxide, formate, hydrogen and traces of propionate as the end-products. In syntrophic association with Methanobacterium formicicum, strain GLU-3<sup>T</sup> oxidized arginine, histidine and glutamate to give propionate as the major product; acetate, carbon dioxide and methane were also produced. Strain GLU-3<sup>T</sup> did not degrade alanine and the branched-chain amino acids valine, leucine and isoleucine either in pure culture or in association with M. formicicum. The nearest phylogenetic relative of strain GLU-3<sup>T</sup> was the thermophile Selenomonas acidaminovorans (similarity value of 89.5%). As strain GLU-3T is phylogenetically, physiologically and genotypically different from other amino-acid-degrading genera, it is proposed that it should be designated a new species of a new genus Aminomonas paucivorans gen. nov., sp. nov. (DSM 12260<sup>T</sup>).</div></front></TEI><inist><standard h6="B"><pA><fA01 i1="01" i2="1"><s0>0020-7713</s0></fA01><fA02 i1="01"><s0>IJSBA8</s0></fA02><fA03 i2="1"><s0>Int. j. syst. bacteriol.</s0></fA03><fA05><s2>49</s2></fA05><fA06><s2>3</s2></fA06><fA08 i1="01" i2="1" l="ENG"><s1>Aminomonas paucivorans gen. nov., sp. nov., a mesophilic, anaerobic, amino-acid-utilizing bacterium</s1></fA08><fA11 i1="01" i2="1"><s1>BAENA (S.)</s1></fA11><fA11 i1="02" i2="1"><s1>FARDEAU (M.-L.)</s1></fA11><fA11 i1="03" i2="1"><s1>OLLIVIER (B.)</s1></fA11><fA11 i1="04" i2="1"><s1>LABAT (M.)</s1></fA11><fA11 i1="05" i2="1"><s1>THOMAS (P.)</s1></fA11><fA11 i1="06" i2="1"><s1>GARCIA (J.-L.)</s1></fA11><fA11 i1="07" i2="1"><s1>PATEL (B. K. C.)</s1></fA11><fA14 i1="01"><s1>Laboratoire ORSTOM de Microbiologie des Anaérobies, Université de Provence, CESB/ESIL Case 925, 163 Avenue de Luminy</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>1 aut.</sZ><sZ>2 aut.</sZ><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></fA14><fA14 i1="02"><s1>Departamento de Biologia, Pontificia Universidad Javeriana, POB 56710</s1><s2>SantaFe de Bogota</s2><s3>COL</s3><sZ>1 aut.</sZ></fA14><fA14 i1="03"><s1>Département de Biologie, Université de la Mediterranée</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>5 aut.</sZ></fA14><fA14 i1="04"><s1>School of Biomolecular and Biomedical Sciences, Faculty of Science and Technology, Griffith University</s1><s2>Nathan, Brisbane 4111</s2><s3>AUS</s3><sZ>6 aut.</sZ><sZ>7 aut.</sZ></fA14><fA20><s1>975-982</s1></fA20><fA21><s1>1999</s1></fA21><fA23 i1="01"><s0>ENG</s0></fA23><fA43 i1="01"><s1>INIST</s1><s2>9775</s2><s5>354000085846670050</s5></fA43><fA44><s0>0000</s0><s1>© 1999 INIST-CNRS. All rights reserved.</s1></fA44><fA45><s0>32 ref.</s0></fA45><fA47 i1="01" i2="1"><s0>99-0402006</s0></fA47><fA60><s1>P</s1></fA60><fA61><s0>A</s0></fA61><fA64 i1="01" i2="1"><s0>International journal of systematic bacteriology</s0></fA64><fA66 i1="01"><s0>USA</s0></fA66><fC01 i1="01" l="ENG"><s0>A novel, asaccharolytic, amino-acid-degrading bacterium, designated strain GLU-3<sup>T</sup>, was isolated from an anaerobic lagoon of a dairy wastewater treatment plant. Strain GLU-3<sup>T</sup> stained Gram-negative and was an obligately anaerobic, non-spore-forming, slightly curved, rod-shaped bacterium (0.3 × 4.0-6.0 μm) which existed singly or in pairs. The DNA G+C content was 43 mol%. Optimum growth occurred at 35 °C and pH 7.5 on arginine with a generation time of 16 h. Good growth was obtained on arginine, histidine, threonine and glycine. Acetate was the end-product formed from all these substrates, but in addition, a trace of formate was detected from arginine and histidine, and ornithine was produced from arginine. Strain GLU-3<sup>T</sup> grew slowly on glutamate and produced acetate, carbon dioxide, formate, hydrogen and traces of propionate as the end-products. In syntrophic association with Methanobacterium formicicum, strain GLU-3<sup>T</sup> oxidized arginine, histidine and glutamate to give propionate as the major product; acetate, carbon dioxide and methane were also produced. Strain GLU-3<sup>T</sup> did not degrade alanine and the branched-chain amino acids valine, leucine and isoleucine either in pure culture or in association with M. formicicum. The nearest phylogenetic relative of strain GLU-3<sup>T</sup> was the thermophile Selenomonas acidaminovorans (similarity value of 89.5%). As strain GLU-3T is phylogenetically, physiologically and genotypically different from other amino-acid-degrading genera, it is proposed that it should be designated a new species of a new genus Aminomonas paucivorans gen. nov., sp. nov. (DSM 12260<sup>T</sup>).</s0></fC01><fC02 i1="01" i2="X"><s0>002A05B02</s0></fC02><fC03 i1="01" i2="X" l="FRE"><s0>Aminoacide</s0><s5>04</s5></fC03><fC03 i1="01" i2="X" l="ENG"><s0>Aminoacid</s0><s5>04</s5></fC03><fC03 i1="01" i2="X" l="SPA"><s0>Aminoácido</s0><s5>04</s5></fC03><fC03 i1="02" i2="X" l="FRE"><s0>Catabolisme</s0><s5>05</s5></fC03><fC03 i1="02" i2="X" l="ENG"><s0>Catabolism</s0><s5>05</s5></fC03><fC03 i1="02" i2="X" l="SPA"><s0>Catabolismo</s0><s5>05</s5></fC03><fC03 i1="03" i2="X" l="FRE"><s0>Genre nouveau</s0><s5>06</s5></fC03><fC03 i1="03" i2="X" l="ENG"><s0>New genus</s0><s5>06</s5></fC03><fC03 i1="03" i2="X" l="SPA"><s0>Género nuevo</s0><s5>06</s5></fC03><fC03 i1="04" i2="X" l="FRE"><s0>Espèce nouvelle</s0><s5>07</s5></fC03><fC03 i1="04" i2="X" l="ENG"><s0>New species</s0><s5>07</s5></fC03><fC03 i1="04" i2="X" l="SPA"><s0>Especie nueva</s0><s5>07</s5></fC03><fC03 i1="05" i2="X" l="FRE"><s0>Mésophilie</s0><s5>08</s5></fC03><fC03 i1="05" i2="X" l="ENG"><s0>Mesophily</s0><s5>08</s5></fC03><fC03 i1="05" i2="X" l="SPA"><s0>Mesofilia</s0><s5>08</s5></fC03><fC03 i1="06" i2="X" l="FRE"><s0>Anaérobie</s0><s5>09</s5></fC03><fC03 i1="06" i2="X" l="ENG"><s0>Anaerobe</s0><s5>09</s5></fC03><fC03 i1="06" i2="X" l="SPA"><s0>Anaerobio</s0><s5>09</s5></fC03><fC03 i1="07" i2="X" l="FRE"><s0>Caractérisation</s0><s5>10</s5></fC03><fC03 i1="07" i2="X" l="ENG"><s0>Characterization</s0><s5>10</s5></fC03><fC03 i1="07" i2="X" l="SPA"><s0>Caracterización</s0><s5>10</s5></fC03><fC03 i1="08" i2="X" l="FRE"><s0>Phénotype</s0><s5>11</s5></fC03><fC03 i1="08" i2="X" l="ENG"><s0>Phenotype</s0><s5>11</s5></fC03><fC03 i1="08" i2="X" l="SPA"><s0>Fenotipo</s0><s5>11</s5></fC03><fC03 i1="09" i2="X" l="FRE"><s0>Génotype</s0><s5>12</s5></fC03><fC03 i1="09" i2="X" l="ENG"><s0>Genotype</s0><s5>12</s5></fC03><fC03 i1="09" i2="X" l="SPA"><s0>Genotipo</s0><s5>12</s5></fC03><fC03 i1="10" i2="X" l="FRE"><s0>Phylogenèse</s0><s5>14</s5></fC03><fC03 i1="10" i2="X" l="ENG"><s0>Phylogeny</s0><s5>14</s5></fC03><fC03 i1="10" i2="X" l="SPA"><s0>Filogénesis</s0><s5>14</s5></fC03><fC03 i1="11" i2="X" l="FRE"><s0>Description</s0><s5>15</s5></fC03><fC03 i1="11" i2="X" l="ENG"><s0>Description</s0><s5>15</s5></fC03><fC03 i1="11" i2="X" l="SPA"><s0>Descripción</s0><s5>15</s5></fC03><fC03 i1="12" i2="X" l="FRE"><s0>Aminomonas paucivorans</s0><s2>NS</s2><s4>INC</s4><s5>91</s5></fC03><fC07 i1="01" i2="X" l="FRE"><s0>Bactérie</s0><s5>43</s5></fC07><fC07 i1="01" i2="X" l="ENG"><s0>Bacteria</s0><s5>43</s5></fC07><fC07 i1="01" i2="X" l="SPA"><s0>Bacteria</s0><s5>43</s5></fC07><fN21><s1>256</s1></fN21></pA></standard></inist></record>Pour manipuler ce document sous Unix (Dilib)
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