Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)
Identifieur interne : 002E67 ( PascalFrancis/Curation ); précédent : 002E66; suivant : 002E68Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)
Auteurs : Eric W. Deutsch [États-Unis] ; Catherine A. Ball [États-Unis] ; Jules J. Berman [États-Unis] ; G. Steven Bova [États-Unis] ; Alvis Brazma [Royaume-Uni] ; Roger E. Bumgamer [États-Unis] ; David Campbell [États-Unis] ; Helen C. Causton [Royaume-Uni] ; Jeffrey H. Christiansen [Royaume-Uni] ; Fabrice Daian [France] ; Delphine Dauga [France] ; Duncan R. Davidson [Royaume-Uni] ; Gregory Gimenez [France] ; Young Ah. Goo [États-Unis] ; Sean Grimmond [Australie] ; Thorsten Henrich [Allemagne] ; Bernhard G. Herrmann [Allemagne] ; Michael H. Johnson [États-Unis] ; Martin Korb [États-Unis] ; Jason C. Mills [États-Unis] ; Asa J. Oudes [États-Unis] ; Helen E. Parkinson [Royaume-Uni] ; Laura E. Pascal [États-Unis] ; N. Icolas Pollet [France] ; John Quackenbush [États-Unis] ; Mirana Ramialison [Allemagne] ; Martin Ringwald [États-Unis] ; David Salgado [France] ; Susanna-Assunta Sansone [Royaume-Uni] ; Gavin Sherlock [États-Unis] ; Christian J. Jr Stoeckert [États-Unis] ; Jason Swedlow [Royaume-Uni] ; Ronald C. Taylor ; Laura Walashek [États-Unis] ; Anthony Warford ; David G. Wilkinson ; YI ZHOU ; Leonard I. Zon ; Alvin Y. Liu [États-Unis] ; Lawrence D. TrueSource :
- Nature biotechnology [ 1087-0156 ] ; 2008.
Descripteurs français
- Pascal (Inist)
- Wicri :
- topic : Base de données, Recommandation.
English descriptors
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Abstract
One purpose of the biomedical literature is to report results in sufficient detail that the methods of data collection and analysis can be independently replicated and verified. Here we present reporting guidelines for gene expression localization experiments: the minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE). MISFISHIE is modeled after the Minimum Information About a Microarray Experiment (MIAME) specification for microarray experiments. Both guidelines define what information should be reported without dictating a format for encoding that information. MISFISHIE describes six types of information to be provided for each experiment: experimental design, biomaterials and treatments, reporters, staining, imaging data and image characterizations. This specification has benefited the consortium within which it was developed and is expected to benefit the wider research community. We welcome feedback from the scientific community to help improve our proposal.
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Herrmann</name><affiliation wicri:level="1"><inist:fA14 i1="13"><s1>Institute for Medical Genetics, Charité-Campus Benjamin Franklin, and Department of Developmental Genetics, Max-Planck-Institute for Molecular Genetics, Ihnestrasse 73</s1><s2>14195 Berlin</s2><s3>DEU</s3><sZ>17 aut.</sZ></inist:fA14><country>Allemagne</country></affiliation></author><author><name sortKey="Johnson, Michael H" sort="Johnson, Michael H" uniqKey="Johnson M" first="Michael H." last="Johnson">Michael H. 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Mills</name><affiliation wicri:level="1"><inist:fA14 i1="14"><s1>Department of Pathology and Immunology, Washington University School of Medicine</s1><s2>St. Louis, Missouri 63110</s2><s3>USA</s3><sZ>20 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Oudes, Asa J" sort="Oudes, Asa J" uniqKey="Oudes A" first="Asa J." last="Oudes">Asa J. Oudes</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Parkinson, Helen E" sort="Parkinson, Helen E" uniqKey="Parkinson H" first="Helen E." last="Parkinson">Helen E. Parkinson</name><affiliation wicri:level="1"><inist:fA14 i1="05"><s1>European Molecular Biology Laboratory (EMBL)-European Bioinformatics Institute, Wellcome Trust Genome Campus</s1><s2>Hinxton, Cambridge CB10 1SD</s2><s3>GBR</s3><sZ>5 aut.</sZ><sZ>22 aut.</sZ><sZ>29 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Pascal, Laura E" sort="Pascal, Laura E" uniqKey="Pascal L" first="Laura E." last="Pascal">Laura E. Pascal</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Icolas Pollet, N" sort="Icolas Pollet, N" uniqKey="Icolas Pollet N" first="N." last="Icolas Pollet">N. Icolas Pollet</name><affiliation wicri:level="1"><inist:fA14 i1="15"><s1>CNRS UMR 8080, Université Paris-Sud</s1><s2>91405 Orsay</s2><s3>FRA</s3><sZ>24 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Quackenbush, John" sort="Quackenbush, John" uniqKey="Quackenbush J" first="John" last="Quackenbush">John Quackenbush</name><affiliation wicri:level="1"><inist:fA14 i1="16"><s1>Dana-Farber Cancer Institute, 44 Binney Street, M232</s1><s2>Boston, Massachusetts 02115</s2><s3>USA</s3><sZ>25 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Ramialison, Mirana" sort="Ramialison, Mirana" uniqKey="Ramialison M" first="Mirana" last="Ramialison">Mirana Ramialison</name><affiliation wicri:level="1"><inist:fA14 i1="12"><s1>EMBL Heidelberg, Meyerhofstrasse 1</s1><s2>69117 Heidelberg</s2><s3>DEU</s3><sZ>16 aut.</sZ><sZ>26 aut.</sZ></inist:fA14><country>Allemagne</country></affiliation></author><author><name sortKey="Ringwald, Martin" sort="Ringwald, Martin" uniqKey="Ringwald M" first="Martin" last="Ringwald">Martin Ringwald</name><affiliation wicri:level="1"><inist:fA14 i1="17"><s1>The Jackson Laboratory, 600 Main Street</s1><s2>Bar Harbor, Maine 04609</s2><s3>USA</s3><sZ>27 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Salgado, David" sort="Salgado, David" uniqKey="Salgado D" first="David" last="Salgado">David Salgado</name><affiliation wicri:level="1"><inist:fA14 i1="09"><s1>Institut de Biologie du Développement de Marseille, UMR 6216, Centre National de la Recherche Scientifique (CNRS)/Université de la Méditerranée, Parc Scientifique de Luminy, Case 907</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>10 aut.</sZ><sZ>11 aut.</sZ><sZ>13 aut.</sZ><sZ>28 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Sansone, Susanna Assunta" sort="Sansone, Susanna Assunta" uniqKey="Sansone S" first="Susanna-Assunta" last="Sansone">Susanna-Assunta Sansone</name><affiliation wicri:level="1"><inist:fA14 i1="05"><s1>European Molecular Biology Laboratory (EMBL)-European Bioinformatics Institute, Wellcome Trust Genome Campus</s1><s2>Hinxton, Cambridge CB10 1SD</s2><s3>GBR</s3><sZ>5 aut.</sZ><sZ>22 aut.</sZ><sZ>29 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Sherlock, Gavin" sort="Sherlock, Gavin" uniqKey="Sherlock G" first="Gavin" last="Sherlock">Gavin Sherlock</name><affiliation wicri:level="1"><inist:fA14 i1="18"><s1>Department of Genetics, Stanford University School of Medicine, 300 Pasteur Drive</s1><s2>Stanford, California 94305-5120</s2><s3>USA</s3><sZ>30 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Stoeckert, Christian J Jr" sort="Stoeckert, Christian J Jr" uniqKey="Stoeckert C" first="Christian J. Jr" last="Stoeckert">Christian J. Jr Stoeckert</name><affiliation wicri:level="1"><inist:fA14 i1="19"><s1>Center for Bioinformatics and Department of Genetics, University of Pennsylvania</s1><s2>Philadelphia, Pennsylvania 19104</s2><s3>USA</s3><sZ>31 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Swedlow, Jason" sort="Swedlow, Jason" uniqKey="Swedlow J" first="Jason" last="Swedlow">Jason Swedlow</name><affiliation wicri:level="1"><inist:fA14 i1="20"><s1>Division of Gene Regulation and Expression, Wellcome Trust Biocentre, University of Dundee, Dow Street</s1><s2>Dundee DD1 5EH, Scotland</s2><s3>GBR</s3><sZ>32 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Taylor, Ronald C" sort="Taylor, Ronald C" uniqKey="Taylor R" first="Ronald C." last="Taylor">Ronald C. Taylor</name></author><author><name sortKey="Walashek, Laura" sort="Walashek, Laura" uniqKey="Walashek L" first="Laura" last="Walashek">Laura Walashek</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Warford, Anthony" sort="Warford, Anthony" uniqKey="Warford A" first="Anthony" last="Warford">Anthony Warford</name></author><author><name sortKey="Wilkinson, David G" sort="Wilkinson, David G" uniqKey="Wilkinson D" first="David G." last="Wilkinson">David G. Wilkinson</name></author><author><name sortKey="Yi Zhou" sort="Yi Zhou" uniqKey="Yi Zhou" last="Yi Zhou">YI ZHOU</name></author><author><name sortKey="Zon, Leonard I" sort="Zon, Leonard I" uniqKey="Zon L" first="Leonard I." last="Zon">Leonard I. Zon</name></author><author><name sortKey="Liu, Alvin Y" sort="Liu, Alvin Y" uniqKey="Liu A" first="Alvin Y." last="Liu">Alvin Y. Liu</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="True, Lawrence D" sort="True, Lawrence D" uniqKey="True L" first="Lawrence D." last="True">Lawrence D. True</name></author></titleStmt><publicationStmt><idno type="wicri:source">INIST</idno><idno type="inist">08-0528290</idno><date when="2008">2008</date><idno type="stanalyst">PASCAL 08-0528290 INIST</idno><idno type="RBID">Pascal:08-0528290</idno><idno type="wicri:Area/PascalFrancis/Corpus">003186</idno><idno type="wicri:Area/PascalFrancis/Curation">002E67</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a">Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)</title><author><name sortKey="Deutsch, Eric W" sort="Deutsch, Eric W" uniqKey="Deutsch E" first="Eric W." last="Deutsch">Eric W. Deutsch</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Ball, Catherine A" sort="Ball, Catherine A" uniqKey="Ball C" first="Catherine A." last="Ball">Catherine A. Ball</name><affiliation wicri:level="1"><inist:fA14 i1="02"><s1>Department of Biochemistry, Stanford University School of Medicine, 279 Campus Drive West</s1><s2>Stanford, California 94305</s2><s3>USA</s3><sZ>2 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Berman, Jules J" sort="Berman, Jules J" uniqKey="Berman J" first="Jules J." last="Berman">Jules J. Berman</name><affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Association for Pathology Informatics, 9650 Rockville Pike</s1><s2>Bethesda, Maryland 20814</s2><s3>USA</s3><sZ>3 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Bova, G Steven" sort="Bova, G Steven" uniqKey="Bova G" first="G. Steven" last="Bova">G. Steven Bova</name><affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Johns Hopkins University School of Medicine, PELICAN Laboratory, Departments of Pathology, Health Information Sciences, Genetic Medicine, Oncology, and Urology</s1><s2>Baltimore, Maryland, 21287</s2><s3>USA</s3><sZ>4 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Brazma, Alvis" sort="Brazma, Alvis" uniqKey="Brazma A" first="Alvis" last="Brazma">Alvis Brazma</name><affiliation wicri:level="1"><inist:fA14 i1="05"><s1>European Molecular Biology Laboratory (EMBL)-European Bioinformatics Institute, Wellcome Trust Genome Campus</s1><s2>Hinxton, Cambridge CB10 1SD</s2><s3>GBR</s3><sZ>5 aut.</sZ><sZ>22 aut.</sZ><sZ>29 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Bumgamer, Roger E" sort="Bumgamer, Roger E" uniqKey="Bumgamer R" first="Roger E." last="Bumgamer">Roger E. Bumgamer</name><affiliation wicri:level="1"><inist:fA14 i1="06"><s1>Department of Microbiology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>6 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Campbell, David" sort="Campbell, David" uniqKey="Campbell D" first="David" last="Campbell">David Campbell</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Causton, Helen C" sort="Causton, Helen C" uniqKey="Causton H" first="Helen C." last="Causton">Helen C. Causton</name><affiliation wicri:level="1"><inist:fA14 i1="07"><s1>Medical Research Council (MRC) Clinical Sciences Centre Microarray Centre, Imperial College School of Medicine</s1><s2>London W12 ONN</s2><s3>GBR</s3><sZ>8 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Christiansen, Jeffrey H" sort="Christiansen, Jeffrey H" uniqKey="Christiansen J" first="Jeffrey H." last="Christiansen">Jeffrey H. Christiansen</name><affiliation wicri:level="1"><inist:fA14 i1="08"><s1>MRC Human Genetics Unit, Western General Hospital, Crewe Road</s1><s2>Edinburgh EH4 2XU</s2><s3>GBR</s3><sZ>9 aut.</sZ><sZ>12 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Daian, Fabrice" sort="Daian, Fabrice" uniqKey="Daian F" first="Fabrice" last="Daian">Fabrice Daian</name><affiliation wicri:level="1"><inist:fA14 i1="09"><s1>Institut de Biologie du Développement de Marseille, UMR 6216, Centre National de la Recherche Scientifique (CNRS)/Université de la Méditerranée, Parc Scientifique de Luminy, Case 907</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>10 aut.</sZ><sZ>11 aut.</sZ><sZ>13 aut.</sZ><sZ>28 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Dauga, Delphine" sort="Dauga, Delphine" uniqKey="Dauga D" first="Delphine" last="Dauga">Delphine Dauga</name><affiliation wicri:level="1"><inist:fA14 i1="09"><s1>Institut de Biologie du Développement de Marseille, UMR 6216, Centre National de la Recherche Scientifique (CNRS)/Université de la Méditerranée, Parc Scientifique de Luminy, Case 907</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>10 aut.</sZ><sZ>11 aut.</sZ><sZ>13 aut.</sZ><sZ>28 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Davidson, Duncan R" sort="Davidson, Duncan R" uniqKey="Davidson D" first="Duncan R." last="Davidson">Duncan R. Davidson</name><affiliation wicri:level="1"><inist:fA14 i1="08"><s1>MRC Human Genetics Unit, Western General Hospital, Crewe Road</s1><s2>Edinburgh EH4 2XU</s2><s3>GBR</s3><sZ>9 aut.</sZ><sZ>12 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Gimenez, Gregory" sort="Gimenez, Gregory" uniqKey="Gimenez G" first="Gregory" last="Gimenez">Gregory Gimenez</name><affiliation wicri:level="1"><inist:fA14 i1="09"><s1>Institut de Biologie du Développement de Marseille, UMR 6216, Centre National de la Recherche Scientifique (CNRS)/Université de la Méditerranée, Parc Scientifique de Luminy, Case 907</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>10 aut.</sZ><sZ>11 aut.</sZ><sZ>13 aut.</sZ><sZ>28 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Goo, Young Ah" sort="Goo, Young Ah" uniqKey="Goo Y" first="Young Ah." last="Goo">Young Ah. Goo</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Grimmond, Sean" sort="Grimmond, Sean" uniqKey="Grimmond S" first="Sean" last="Grimmond">Sean Grimmond</name><affiliation wicri:level="1"><inist:fA14 i1="11"><s1>Institute for Molecular Bioscience, University of Queensland</s1><s2>St. Lucia, Queensland 4027</s2><s3>AUS</s3><sZ>15 aut.</sZ></inist:fA14><country>Australie</country></affiliation></author><author><name sortKey="Henrich, Thorsten" sort="Henrich, Thorsten" uniqKey="Henrich T" first="Thorsten" last="Henrich">Thorsten Henrich</name><affiliation wicri:level="1"><inist:fA14 i1="12"><s1>EMBL Heidelberg, Meyerhofstrasse 1</s1><s2>69117 Heidelberg</s2><s3>DEU</s3><sZ>16 aut.</sZ><sZ>26 aut.</sZ></inist:fA14><country>Allemagne</country></affiliation></author><author><name sortKey="Herrmann, Bernhard G" sort="Herrmann, Bernhard G" uniqKey="Herrmann B" first="Bernhard G." last="Herrmann">Bernhard G. Herrmann</name><affiliation wicri:level="1"><inist:fA14 i1="13"><s1>Institute for Medical Genetics, Charité-Campus Benjamin Franklin, and Department of Developmental Genetics, Max-Planck-Institute for Molecular Genetics, Ihnestrasse 73</s1><s2>14195 Berlin</s2><s3>DEU</s3><sZ>17 aut.</sZ></inist:fA14><country>Allemagne</country></affiliation></author><author><name sortKey="Johnson, Michael H" sort="Johnson, Michael H" uniqKey="Johnson M" first="Michael H." last="Johnson">Michael H. Johnson</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Korb, Martin" sort="Korb, Martin" uniqKey="Korb M" first="Martin" last="Korb">Martin Korb</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Mills, Jason C" sort="Mills, Jason C" uniqKey="Mills J" first="Jason C." last="Mills">Jason C. Mills</name><affiliation wicri:level="1"><inist:fA14 i1="14"><s1>Department of Pathology and Immunology, Washington University School of Medicine</s1><s2>St. Louis, Missouri 63110</s2><s3>USA</s3><sZ>20 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Oudes, Asa J" sort="Oudes, Asa J" uniqKey="Oudes A" first="Asa J." last="Oudes">Asa J. Oudes</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Parkinson, Helen E" sort="Parkinson, Helen E" uniqKey="Parkinson H" first="Helen E." last="Parkinson">Helen E. Parkinson</name><affiliation wicri:level="1"><inist:fA14 i1="05"><s1>European Molecular Biology Laboratory (EMBL)-European Bioinformatics Institute, Wellcome Trust Genome Campus</s1><s2>Hinxton, Cambridge CB10 1SD</s2><s3>GBR</s3><sZ>5 aut.</sZ><sZ>22 aut.</sZ><sZ>29 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Pascal, Laura E" sort="Pascal, Laura E" uniqKey="Pascal L" first="Laura E." last="Pascal">Laura E. Pascal</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Icolas Pollet, N" sort="Icolas Pollet, N" uniqKey="Icolas Pollet N" first="N." last="Icolas Pollet">N. Icolas Pollet</name><affiliation wicri:level="1"><inist:fA14 i1="15"><s1>CNRS UMR 8080, Université Paris-Sud</s1><s2>91405 Orsay</s2><s3>FRA</s3><sZ>24 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Quackenbush, John" sort="Quackenbush, John" uniqKey="Quackenbush J" first="John" last="Quackenbush">John Quackenbush</name><affiliation wicri:level="1"><inist:fA14 i1="16"><s1>Dana-Farber Cancer Institute, 44 Binney Street, M232</s1><s2>Boston, Massachusetts 02115</s2><s3>USA</s3><sZ>25 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Ramialison, Mirana" sort="Ramialison, Mirana" uniqKey="Ramialison M" first="Mirana" last="Ramialison">Mirana Ramialison</name><affiliation wicri:level="1"><inist:fA14 i1="12"><s1>EMBL Heidelberg, Meyerhofstrasse 1</s1><s2>69117 Heidelberg</s2><s3>DEU</s3><sZ>16 aut.</sZ><sZ>26 aut.</sZ></inist:fA14><country>Allemagne</country></affiliation></author><author><name sortKey="Ringwald, Martin" sort="Ringwald, Martin" uniqKey="Ringwald M" first="Martin" last="Ringwald">Martin Ringwald</name><affiliation wicri:level="1"><inist:fA14 i1="17"><s1>The Jackson Laboratory, 600 Main Street</s1><s2>Bar Harbor, Maine 04609</s2><s3>USA</s3><sZ>27 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Salgado, David" sort="Salgado, David" uniqKey="Salgado D" first="David" last="Salgado">David Salgado</name><affiliation wicri:level="1"><inist:fA14 i1="09"><s1>Institut de Biologie du Développement de Marseille, UMR 6216, Centre National de la Recherche Scientifique (CNRS)/Université de la Méditerranée, Parc Scientifique de Luminy, Case 907</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>10 aut.</sZ><sZ>11 aut.</sZ><sZ>13 aut.</sZ><sZ>28 aut.</sZ></inist:fA14><country>France</country></affiliation></author><author><name sortKey="Sansone, Susanna Assunta" sort="Sansone, Susanna Assunta" uniqKey="Sansone S" first="Susanna-Assunta" last="Sansone">Susanna-Assunta Sansone</name><affiliation wicri:level="1"><inist:fA14 i1="05"><s1>European Molecular Biology Laboratory (EMBL)-European Bioinformatics Institute, Wellcome Trust Genome Campus</s1><s2>Hinxton, Cambridge CB10 1SD</s2><s3>GBR</s3><sZ>5 aut.</sZ><sZ>22 aut.</sZ><sZ>29 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Sherlock, Gavin" sort="Sherlock, Gavin" uniqKey="Sherlock G" first="Gavin" last="Sherlock">Gavin Sherlock</name><affiliation wicri:level="1"><inist:fA14 i1="18"><s1>Department of Genetics, Stanford University School of Medicine, 300 Pasteur Drive</s1><s2>Stanford, California 94305-5120</s2><s3>USA</s3><sZ>30 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Stoeckert, Christian J Jr" sort="Stoeckert, Christian J Jr" uniqKey="Stoeckert C" first="Christian J. Jr" last="Stoeckert">Christian J. Jr Stoeckert</name><affiliation wicri:level="1"><inist:fA14 i1="19"><s1>Center for Bioinformatics and Department of Genetics, University of Pennsylvania</s1><s2>Philadelphia, Pennsylvania 19104</s2><s3>USA</s3><sZ>31 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Swedlow, Jason" sort="Swedlow, Jason" uniqKey="Swedlow J" first="Jason" last="Swedlow">Jason Swedlow</name><affiliation wicri:level="1"><inist:fA14 i1="20"><s1>Division of Gene Regulation and Expression, Wellcome Trust Biocentre, University of Dundee, Dow Street</s1><s2>Dundee DD1 5EH, Scotland</s2><s3>GBR</s3><sZ>32 aut.</sZ></inist:fA14><country>Royaume-Uni</country></affiliation></author><author><name sortKey="Taylor, Ronald C" sort="Taylor, Ronald C" uniqKey="Taylor R" first="Ronald C." last="Taylor">Ronald C. Taylor</name></author><author><name sortKey="Walashek, Laura" sort="Walashek, Laura" uniqKey="Walashek L" first="Laura" last="Walashek">Laura Walashek</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="Warford, Anthony" sort="Warford, Anthony" uniqKey="Warford A" first="Anthony" last="Warford">Anthony Warford</name></author><author><name sortKey="Wilkinson, David G" sort="Wilkinson, David G" uniqKey="Wilkinson D" first="David G." last="Wilkinson">David G. Wilkinson</name></author><author><name sortKey="Yi Zhou" sort="Yi Zhou" uniqKey="Yi Zhou" last="Yi Zhou">YI ZHOU</name></author><author><name sortKey="Zon, Leonard I" sort="Zon, Leonard I" uniqKey="Zon L" first="Leonard I." last="Zon">Leonard I. Zon</name></author><author><name sortKey="Liu, Alvin Y" sort="Liu, Alvin Y" uniqKey="Liu A" first="Alvin Y." last="Liu">Alvin Y. Liu</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></inist:fA14><country>États-Unis</country></affiliation></author><author><name sortKey="True, Lawrence D" sort="True, Lawrence D" uniqKey="True L" first="Lawrence D." last="True">Lawrence D. True</name></author></analytic><series><title level="j" type="main">Nature biotechnology</title><title level="j" type="abbreviated">Nat. biotechnol.</title><idno type="ISSN">1087-0156</idno><imprint><date when="2008">2008</date></imprint></series></biblStruct></sourceDesc><seriesStmt><title level="j" type="main">Nature biotechnology</title><title level="j" type="abbreviated">Nat. biotechnol.</title><idno type="ISSN">1087-0156</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bioinformatics</term><term>Data warehouse</term><term>Database</term><term>Document type definition</term><term>Gene expression</term><term>Immunohistochemistry</term><term>In situ</term><term>Molecular hybridization</term><term>Recommendation</term><term>Specification</term><term>XML language</term></keywords><keywords scheme="Pascal" xml:lang="fr"><term>In situ</term><term>Immunohistochimie</term><term>Base de données</term><term>Entrepôt donnée</term><term>Spécification</term><term>Langage XML</term><term>Bioinformatique</term><term>Recommandation</term><term>Hybridation moléculaire</term><term>Expression génique</term><term>Définition type document</term><term>Format donnée</term></keywords><keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Base de données</term><term>Recommandation</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">One purpose of the biomedical literature is to report results in sufficient detail that the methods of data collection and analysis can be independently replicated and verified. Here we present reporting guidelines for gene expression localization experiments: the minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE). MISFISHIE is modeled after the Minimum Information About a Microarray Experiment (MIAME) specification for microarray experiments. Both guidelines define what information should be reported without dictating a format for encoding that information. MISFISHIE describes six types of information to be provided for each experiment: experimental design, biomaterials and treatments, reporters, staining, imaging data and image characterizations. This specification has benefited the consortium within which it was developed and is expected to benefit the wider research community. We welcome feedback from the scientific community to help improve our proposal.</div></front></TEI><inist><standard h6="B"><pA><fA01 i1="01" i2="1"><s0>1087-0156</s0></fA01><fA02 i1="01"><s0>NABIF9</s0></fA02><fA03 i2="1"><s0>Nat. biotechnol.</s0></fA03><fA05><s2>26</s2></fA05><fA06><s2>3</s2></fA06><fA08 i1="01" i2="1" l="ENG"><s1>Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)</s1></fA08><fA11 i1="01" i2="1"><s1>DEUTSCH (Eric W.)</s1></fA11><fA11 i1="02" i2="1"><s1>BALL (Catherine A.)</s1></fA11><fA11 i1="03" i2="1"><s1>BERMAN (Jules J.)</s1></fA11><fA11 i1="04" i2="1"><s1>BOVA (G. Steven)</s1></fA11><fA11 i1="05" i2="1"><s1>BRAZMA (Alvis)</s1></fA11><fA11 i1="06" i2="1"><s1>BUMGAMER (Roger E.)</s1></fA11><fA11 i1="07" i2="1"><s1>CAMPBELL (David)</s1></fA11><fA11 i1="08" i2="1"><s1>CAUSTON (Helen C.)</s1></fA11><fA11 i1="09" i2="1"><s1>CHRISTIANSEN (Jeffrey H.)</s1></fA11><fA11 i1="10" i2="1"><s1>DAIAN (Fabrice)</s1></fA11><fA11 i1="11" i2="1"><s1>DAUGA (Delphine)</s1></fA11><fA11 i1="12" i2="1"><s1>DAVIDSON (Duncan R.)</s1></fA11><fA11 i1="13" i2="1"><s1>GIMENEZ (Gregory)</s1></fA11><fA11 i1="14" i2="1"><s1>GOO (Young Ah.)</s1></fA11><fA11 i1="15" i2="1"><s1>GRIMMOND (Sean)</s1></fA11><fA11 i1="16" i2="1"><s1>HENRICH (Thorsten)</s1></fA11><fA11 i1="17" i2="1"><s1>HERRMANN (Bernhard G.)</s1></fA11><fA11 i1="18" i2="1"><s1>JOHNSON (Michael H.)</s1></fA11><fA11 i1="19" i2="1"><s1>KORB (Martin)</s1></fA11><fA11 i1="20" i2="1"><s1>MILLS (Jason C.)</s1></fA11><fA11 i1="21" i2="1"><s1>OUDES (Asa J.)</s1></fA11><fA11 i1="22" i2="1"><s1>PARKINSON (Helen E.)</s1></fA11><fA11 i1="23" i2="1"><s1>PASCAL (Laura E.)</s1></fA11><fA11 i1="24" i2="1"><s1>ICOLAS POLLET (N.)</s1></fA11><fA11 i1="25" i2="1"><s1>QUACKENBUSH (John)</s1></fA11><fA11 i1="26" i2="1"><s1>RAMIALISON (Mirana)</s1></fA11><fA11 i1="27" i2="1"><s1>RINGWALD (Martin)</s1></fA11><fA11 i1="28" i2="1"><s1>SALGADO (David)</s1></fA11><fA11 i1="29" i2="1"><s1>SANSONE (Susanna-Assunta)</s1></fA11><fA11 i1="30" i2="1"><s1>SHERLOCK (Gavin)</s1></fA11><fA11 i1="31" i2="1"><s1>STOECKERT (Christian J. JR)</s1></fA11><fA11 i1="32" i2="1"><s1>SWEDLOW (Jason)</s1></fA11><fA11 i1="33" i2="1"><s1>TAYLOR (Ronald C.)</s1></fA11><fA11 i1="34" i2="1"><s1>WALASHEK (Laura)</s1></fA11><fA11 i1="35" i2="1"><s1>WARFORD (Anthony)</s1></fA11><fA11 i1="36" i2="1"><s1>WILKINSON (David G.)</s1></fA11><fA11 i1="37" i2="1"><s1>YI ZHOU</s1></fA11><fA11 i1="38" i2="1"><s1>ZON (Leonard I.)</s1></fA11><fA11 i1="39" i2="1"><s1>LIU (Alvin Y.)</s1></fA11><fA11 i1="40" i2="1"><s1>TRUE (Lawrence D.)</s1></fA11><fA14 i1="01"><s1>Institute for Systems Biology, 1441 N 34th Street</s1><s2>Seattle, Washington 98103</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>7 aut.</sZ><sZ>14 aut.</sZ><sZ>18 aut.</sZ><sZ>19 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></fA14><fA14 i1="02"><s1>Department of Biochemistry, Stanford University School of Medicine, 279 Campus Drive West</s1><s2>Stanford, California 94305</s2><s3>USA</s3><sZ>2 aut.</sZ></fA14><fA14 i1="03"><s1>Association for Pathology Informatics, 9650 Rockville Pike</s1><s2>Bethesda, Maryland 20814</s2><s3>USA</s3><sZ>3 aut.</sZ></fA14><fA14 i1="04"><s1>Johns Hopkins University School of Medicine, PELICAN Laboratory, Departments of Pathology, Health Information Sciences, Genetic Medicine, Oncology, and Urology</s1><s2>Baltimore, Maryland, 21287</s2><s3>USA</s3><sZ>4 aut.</sZ></fA14><fA14 i1="05"><s1>European Molecular Biology Laboratory (EMBL)-European Bioinformatics Institute, Wellcome Trust Genome Campus</s1><s2>Hinxton, Cambridge CB10 1SD</s2><s3>GBR</s3><sZ>5 aut.</sZ><sZ>22 aut.</sZ><sZ>29 aut.</sZ></fA14><fA14 i1="06"><s1>Department of Microbiology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>6 aut.</sZ></fA14><fA14 i1="07"><s1>Medical Research Council (MRC) Clinical Sciences Centre Microarray Centre, Imperial College School of Medicine</s1><s2>London W12 ONN</s2><s3>GBR</s3><sZ>8 aut.</sZ></fA14><fA14 i1="08"><s1>MRC Human Genetics Unit, Western General Hospital, Crewe Road</s1><s2>Edinburgh EH4 2XU</s2><s3>GBR</s3><sZ>9 aut.</sZ><sZ>12 aut.</sZ></fA14><fA14 i1="09"><s1>Institut de Biologie du Développement de Marseille, UMR 6216, Centre National de la Recherche Scientifique (CNRS)/Université de la Méditerranée, Parc Scientifique de Luminy, Case 907</s1><s2>13288 Marseille</s2><s3>FRA</s3><sZ>10 aut.</sZ><sZ>11 aut.</sZ><sZ>13 aut.</sZ><sZ>28 aut.</sZ></fA14><fA14 i1="10"><s1>Department of Urology, University of Washington</s1><s2>Seattle, Washington 98195</s2><s3>USA</s3><sZ>14 aut.</sZ><sZ>21 aut.</sZ><sZ>23 aut.</sZ><sZ>34 aut.</sZ><sZ>39 aut.</sZ></fA14><fA14 i1="11"><s1>Institute for Molecular Bioscience, University of Queensland</s1><s2>St. Lucia, Queensland 4027</s2><s3>AUS</s3><sZ>15 aut.</sZ></fA14><fA14 i1="12"><s1>EMBL Heidelberg, Meyerhofstrasse 1</s1><s2>69117 Heidelberg</s2><s3>DEU</s3><sZ>16 aut.</sZ><sZ>26 aut.</sZ></fA14><fA14 i1="13"><s1>Institute for Medical Genetics, Charité-Campus Benjamin Franklin, and Department of Developmental Genetics, Max-Planck-Institute for Molecular Genetics, Ihnestrasse 73</s1><s2>14195 Berlin</s2><s3>DEU</s3><sZ>17 aut.</sZ></fA14><fA14 i1="14"><s1>Department of Pathology and Immunology, Washington University School of Medicine</s1><s2>St. Louis, Missouri 63110</s2><s3>USA</s3><sZ>20 aut.</sZ></fA14><fA14 i1="15"><s1>CNRS UMR 8080, Université Paris-Sud</s1><s2>91405 Orsay</s2><s3>FRA</s3><sZ>24 aut.</sZ></fA14><fA14 i1="16"><s1>Dana-Farber Cancer Institute, 44 Binney Street, M232</s1><s2>Boston, Massachusetts 02115</s2><s3>USA</s3><sZ>25 aut.</sZ></fA14><fA14 i1="17"><s1>The Jackson Laboratory, 600 Main Street</s1><s2>Bar Harbor, Maine 04609</s2><s3>USA</s3><sZ>27 aut.</sZ></fA14><fA14 i1="18"><s1>Department of Genetics, Stanford University School of Medicine, 300 Pasteur Drive</s1><s2>Stanford, California 94305-5120</s2><s3>USA</s3><sZ>30 aut.</sZ></fA14><fA14 i1="19"><s1>Center for Bioinformatics and Department of Genetics, University of Pennsylvania</s1><s2>Philadelphia, Pennsylvania 19104</s2><s3>USA</s3><sZ>31 aut.</sZ></fA14><fA14 i1="20"><s1>Division of Gene Regulation and Expression, Wellcome Trust Biocentre, University of Dundee, Dow Street</s1><s2>Dundee DD1 5EH, Scotland</s2><s3>GBR</s3><sZ>32 aut.</sZ></fA14><fA20><s1>305-312</s1></fA20><fA21><s1>2008</s1></fA21><fA23 i1="01"><s0>ENG</s0></fA23><fA43 i1="01"><s1>INIST</s1><s2>19676</s2><s5>354000197840660140</s5></fA43><fA44><s0>0000</s0><s1>© 2008 INIST-CNRS. All rights reserved.</s1></fA44><fA45><s0>70 ref.</s0></fA45><fA47 i1="01" i2="1"><s0>08-0528290</s0></fA47><fA60><s1>P</s1></fA60><fA61><s0>A</s0></fA61><fA64 i1="01" i2="1"><s0>Nature biotechnology</s0></fA64><fA66 i1="01"><s0>USA</s0></fA66><fC01 i1="01" l="ENG"><s0>One purpose of the biomedical literature is to report results in sufficient detail that the methods of data collection and analysis can be independently replicated and verified. Here we present reporting guidelines for gene expression localization experiments: the minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE). MISFISHIE is modeled after the Minimum Information About a Microarray Experiment (MIAME) specification for microarray experiments. Both guidelines define what information should be reported without dictating a format for encoding that information. MISFISHIE describes six types of information to be provided for each experiment: experimental design, biomaterials and treatments, reporters, staining, imaging data and image characterizations. This specification has benefited the consortium within which it was developed and is expected to benefit the wider research community. We welcome feedback from the scientific community to help improve our proposal.</s0></fC01><fC02 i1="01" i2="X"><s0>002A01B</s0></fC02><fC03 i1="01" i2="X" l="FRE"><s0>In situ</s0><s5>01</s5></fC03><fC03 i1="01" i2="X" l="ENG"><s0>In situ</s0><s5>01</s5></fC03><fC03 i1="01" i2="X" l="SPA"><s0>In situ</s0><s5>01</s5></fC03><fC03 i1="02" i2="X" l="FRE"><s0>Immunohistochimie</s0><s5>10</s5></fC03><fC03 i1="02" i2="X" l="ENG"><s0>Immunohistochemistry</s0><s5>10</s5></fC03><fC03 i1="02" i2="X" l="SPA"><s0>Inmunohistoquímica</s0><s5>10</s5></fC03><fC03 i1="03" i2="X" l="FRE"><s0>Base de données</s0><s5>11</s5></fC03><fC03 i1="03" i2="X" l="ENG"><s0>Database</s0><s5>11</s5></fC03><fC03 i1="03" i2="X" l="SPA"><s0>Base dato</s0><s5>11</s5></fC03><fC03 i1="04" i2="X" l="FRE"><s0>Entrepôt donnée</s0><s5>12</s5></fC03><fC03 i1="04" i2="X" l="ENG"><s0>Data warehouse</s0><s5>12</s5></fC03><fC03 i1="04" i2="X" l="SPA"><s0>Almacen dato</s0><s5>12</s5></fC03><fC03 i1="05" i2="X" l="FRE"><s0>Spécification</s0><s5>19</s5></fC03><fC03 i1="05" i2="X" l="ENG"><s0>Specification</s0><s5>19</s5></fC03><fC03 i1="05" i2="X" l="SPA"><s0>Especificación</s0><s5>19</s5></fC03><fC03 i1="06" i2="X" l="FRE"><s0>Langage XML</s0><s5>20</s5></fC03><fC03 i1="06" i2="X" l="ENG"><s0>XML language</s0><s5>20</s5></fC03><fC03 i1="06" i2="X" l="SPA"><s0>Lenguaje XML</s0><s5>20</s5></fC03><fC03 i1="07" i2="X" l="FRE"><s0>Bioinformatique</s0><s5>21</s5></fC03><fC03 i1="07" i2="X" l="ENG"><s0>Bioinformatics</s0><s5>21</s5></fC03><fC03 i1="07" i2="X" l="SPA"><s0>Bioinformática</s0><s5>21</s5></fC03><fC03 i1="08" i2="X" l="FRE"><s0>Recommandation</s0><s5>22</s5></fC03><fC03 i1="08" i2="X" l="ENG"><s0>Recommendation</s0><s5>22</s5></fC03><fC03 i1="08" i2="X" l="SPA"><s0>Recomendación</s0><s5>22</s5></fC03><fC03 i1="09" i2="X" l="FRE"><s0>Hybridation moléculaire</s0><s5>35</s5></fC03><fC03 i1="09" i2="X" l="ENG"><s0>Molecular hybridization</s0><s5>35</s5></fC03><fC03 i1="09" i2="X" l="SPA"><s0>Hibridación molecular</s0><s5>35</s5></fC03><fC03 i1="10" i2="X" l="FRE"><s0>Expression génique</s0><s5>36</s5></fC03><fC03 i1="10" i2="X" l="ENG"><s0>Gene expression</s0><s5>36</s5></fC03><fC03 i1="10" i2="X" l="SPA"><s0>Expresión genética</s0><s5>36</s5></fC03><fC03 i1="11" i2="X" l="FRE"><s0>Définition type document</s0><s5>37</s5></fC03><fC03 i1="11" i2="X" l="ENG"><s0>Document type definition</s0><s5>37</s5></fC03><fC03 i1="11" i2="X" l="SPA"><s0>Definición tipo documento</s0><s5>37</s5></fC03><fC03 i1="12" i2="X" l="FRE"><s0>Format donnée</s0><s4>INC</s4><s5>91</s5></fC03><fN21><s1>343</s1></fN21></pA></standard></inist></record>Pour manipuler ce document sous Unix (Dilib)
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