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Biodegradation of free phytol by bacterial communities isolated from marine sediments under aerobic and denitrifying conditions

Identifieur interne : 006145 ( PascalFrancis/Corpus ); précédent : 006144; suivant : 006146

Biodegradation of free phytol by bacterial communities isolated from marine sediments under aerobic and denitrifying conditions

Auteurs : J.-F. Rontani ; P. C. Bonin ; J. K. Volkman

Source :

RBID : Pascal:00-0045924

Descripteurs français

English descriptors

Abstract

Biodegradation of (E)-phytol [3,7,11,15-tetramethylhexadec-2(E)-en-1-ol] by two bacterial communities isolated from recent marine sediments under aerobic and denitrifying conditions was studied at 20°C. This isoprenoid alcohol is metabolized efficiently by these two bacterial communities via 6,10,14-trimethylpentadecan-2-one and (E)-phytenic acid. The first step in both aerobic and anaerobic bacterial degradation of (E)-phytol involves the transient production of (E)-phytenal, which in turn can be abiotically converted to 6,10,14-trimethylpentadecan-2-one. Most of the isoprenoid metabolites identified in vitro could be detected in a fresh sediment core collected at the same site as the sediments used for the incubations. Since (E)-phytenal is less sensitive to abiotic degradation at the temperature of the sediments (15°C), the major part of (E)-phytol appeared to be biodegraded in situ via (E)-phytenic acid. (Z)- and (E)-phytenic acids are present in particularly large quantities in the upper section of the core, and their concentrations quickly decrease with depth in the core. This degradation (which takes place without significant production of phytanic acid) is attributed to the involvement of alternating β-decarboxymethylation and β-oxidation reaction sequences induced by denitrifiers. Despite the low nitrate concentration of marine sediments, denitrifying bacteria seem to play a significant role in the mineralization of (E)-phytol.

Notice en format standard (ISO 2709)

Pour connaître la documentation sur le format Inist Standard.

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A02 01      @0 AEMIDF
A03   1    @0 Appl. environ. microbiol. : (Print)
A05       @2 65
A06       @2 12
A08 01  1  ENG  @1 Biodegradation of free phytol by bacterial communities isolated from marine sediments under aerobic and denitrifying conditions
A11 01  1    @1 RONTANI (J.-F.)
A11 02  1    @1 BONIN (P. C.)
A11 03  1    @1 VOLKMAN (J. K.)
A14 01      @1 Laboratoire d'Océanographie et de Biogéochimie (UMR 6535), Centre d'Océanologie de Marseille (OSU), Campus de Luminy @2 13288 Marseille @3 FRA @Z 1 aut. @Z 2 aut.
A14 02      @1 CSIRO Marine Research @2 Hobart, Tasmania 7001 @3 AUS @Z 3 aut.
A20       @1 5484-5492
A21       @1 1999
A23 01      @0 ENG
A43 01      @1 INIST @2 7195 @5 354000080849240440
A44       @0 0000 @1 © 2000 INIST-CNRS. All rights reserved.
A45       @0 51 ref.
A47 01  1    @0 00-0045924
A60       @1 P
A61       @0 A
A64 01  1    @0 Applied and environmental microbiology : (Print)
A66 01      @0 USA
C01 01    ENG  @0 Biodegradation of (E)-phytol [3,7,11,15-tetramethylhexadec-2(E)-en-1-ol] by two bacterial communities isolated from recent marine sediments under aerobic and denitrifying conditions was studied at 20°C. This isoprenoid alcohol is metabolized efficiently by these two bacterial communities via 6,10,14-trimethylpentadecan-2-one and (E)-phytenic acid. The first step in both aerobic and anaerobic bacterial degradation of (E)-phytol involves the transient production of (E)-phytenal, which in turn can be abiotically converted to 6,10,14-trimethylpentadecan-2-one. Most of the isoprenoid metabolites identified in vitro could be detected in a fresh sediment core collected at the same site as the sediments used for the incubations. Since (E)-phytenal is less sensitive to abiotic degradation at the temperature of the sediments (15°C), the major part of (E)-phytol appeared to be biodegraded in situ via (E)-phytenic acid. (Z)- and (E)-phytenic acids are present in particularly large quantities in the upper section of the core, and their concentrations quickly decrease with depth in the core. This degradation (which takes place without significant production of phytanic acid) is attributed to the involvement of alternating β-decarboxymethylation and β-oxidation reaction sequences induced by denitrifiers. Despite the low nitrate concentration of marine sediments, denitrifying bacteria seem to play a significant role in the mineralization of (E)-phytol.
C02 01  X    @0 002A14C02
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C03 01  X  ENG  @0 Isoprenoid @5 01
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C03 02  X  FRE  @0 Dégradation biologique @5 02
C03 02  X  ENG  @0 Biodegradation @5 02
C03 02  X  SPA  @0 Degradación biológica @5 02
C03 03  X  FRE  @0 Sédiment @5 10
C03 03  X  ENG  @0 Sediments @5 10
C03 03  X  SPA  @0 Sedimento @5 10
C03 04  X  FRE  @0 Aérobiose @5 11
C03 04  X  ENG  @0 Aerobiosis @5 11
C03 04  X  SPA  @0 Aerobiosis @5 11
C03 05  X  FRE  @0 Dénitrification @5 12
C03 05  X  ENG  @0 Denitrification @5 12
C03 05  X  SPA  @0 Desnitrificación @5 12
C03 06  X  FRE  @0 Communauté microbienne @5 19
C03 06  X  ENG  @0 Microbial community @5 19
C03 06  X  SPA  @0 Comunidad microbiana @5 19
C03 07  X  FRE  @0 Métabolite @5 21
C03 07  X  ENG  @0 Metabolite @5 21
C03 07  X  SPA  @0 Metabolito @5 21
C03 08  X  FRE  @0 Voie métabolique @5 35
C03 08  X  ENG  @0 Metabolic pathway @5 35
C03 08  X  SPA  @0 Vía métabolica @5 35
C03 09  X  FRE  @0 Milieu marin @5 53
C03 09  X  ENG  @0 Marine environment @5 53
C03 09  X  SPA  @0 Medio marino @5 53
C03 10  X  FRE  @0 Phytol @4 INC @5 91
N21       @1 031

Format Inist (serveur)

NO : PASCAL 00-0045924 INIST
ET : Biodegradation of free phytol by bacterial communities isolated from marine sediments under aerobic and denitrifying conditions
AU : RONTANI (J.-F.); BONIN (P. C.); VOLKMAN (J. K.)
AF : Laboratoire d'Océanographie et de Biogéochimie (UMR 6535), Centre d'Océanologie de Marseille (OSU), Campus de Luminy/13288 Marseille/France (1 aut., 2 aut.); CSIRO Marine Research/Hobart, Tasmania 7001/Australie (3 aut.)
DT : Publication en série; Niveau analytique
SO : Applied and environmental microbiology : (Print); ISSN 0099-2240; Coden AEMIDF; Etats-Unis; Da. 1999; Vol. 65; No. 12; Pp. 5484-5492; Bibl. 51 ref.
LA : Anglais
EA : Biodegradation of (E)-phytol [3,7,11,15-tetramethylhexadec-2(E)-en -1-ol] by two bacterial communities isolated from recent marine sediments under aerobic and denitrifying conditions was studied at 20°C. This isoprenoid alcohol is metabolized efficiently by these two bacterial communities via 6,10,14-trimethylpentadecan-2-one and (E)-phytenic acid. The first step in both aerobic and anaerobic bacterial degradation of (E)-phytol involves the transient production of (E)-phytenal, which in turn can be abiotically converted to 6,10,14-trimethylpentadecan-2-one. Most of the isoprenoid metabolites identified in vitro could be detected in a fresh sediment core collected at the same site as the sediments used for the incubations. Since (E)-phytenal is less sensitive to abiotic degradation at the temperature of the sediments (15°C), the major part of (E)-phytol appeared to be biodegraded in situ via (E)-phytenic acid. (Z)- and (E)-phytenic acids are present in particularly large quantities in the upper section of the core, and their concentrations quickly decrease with depth in the core. This degradation (which takes place without significant production of phytanic acid) is attributed to the involvement of alternating β-decarboxymethylation and β-oxidation reaction sequences induced by denitrifiers. Despite the low nitrate concentration of marine sediments, denitrifying bacteria seem to play a significant role in the mineralization of (E)-phytol.
CC : 002A14C02
FD : Isoprénoïde; Dégradation biologique; Sédiment; Aérobiose; Dénitrification; Communauté microbienne; Métabolite; Voie métabolique; Milieu marin; Phytol
ED : Isoprenoid; Biodegradation; Sediments; Aerobiosis; Denitrification; Microbial community; Metabolite; Metabolic pathway; Marine environment
SD : Isoprenoide; Degradación biológica; Sedimento; Aerobiosis; Desnitrificación; Comunidad microbiana; Metabolito; Vía métabolica; Medio marino
LO : INIST-7195.354000080849240440
ID : 00-0045924

Links to Exploration step

Pascal:00-0045924

Le document en format XML

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<ET>Biodegradation of free phytol by bacterial communities isolated from marine sediments under aerobic and denitrifying conditions</ET>
<AU>RONTANI (J.-F.); BONIN (P. C.); VOLKMAN (J. K.)</AU>
<AF>Laboratoire d'Océanographie et de Biogéochimie (UMR 6535), Centre d'Océanologie de Marseille (OSU), Campus de Luminy/13288 Marseille/France (1 aut., 2 aut.); CSIRO Marine Research/Hobart, Tasmania 7001/Australie (3 aut.)</AF>
<DT>Publication en série; Niveau analytique</DT>
<SO>Applied and environmental microbiology : (Print); ISSN 0099-2240; Coden AEMIDF; Etats-Unis; Da. 1999; Vol. 65; No. 12; Pp. 5484-5492; Bibl. 51 ref.</SO>
<LA>Anglais</LA>
<EA>Biodegradation of (E)-phytol [3,7,11,15-tetramethylhexadec-2(E)-en -1-ol] by two bacterial communities isolated from recent marine sediments under aerobic and denitrifying conditions was studied at 20°C. This isoprenoid alcohol is metabolized efficiently by these two bacterial communities via 6,10,14-trimethylpentadecan-2-one and (E)-phytenic acid. The first step in both aerobic and anaerobic bacterial degradation of (E)-phytol involves the transient production of (E)-phytenal, which in turn can be abiotically converted to 6,10,14-trimethylpentadecan-2-one. Most of the isoprenoid metabolites identified in vitro could be detected in a fresh sediment core collected at the same site as the sediments used for the incubations. Since (E)-phytenal is less sensitive to abiotic degradation at the temperature of the sediments (15°C), the major part of (E)-phytol appeared to be biodegraded in situ via (E)-phytenic acid. (Z)- and (E)-phytenic acids are present in particularly large quantities in the upper section of the core, and their concentrations quickly decrease with depth in the core. This degradation (which takes place without significant production of phytanic acid) is attributed to the involvement of alternating β-decarboxymethylation and β-oxidation reaction sequences induced by denitrifiers. Despite the low nitrate concentration of marine sediments, denitrifying bacteria seem to play a significant role in the mineralization of (E)-phytol.</EA>
<CC>002A14C02</CC>
<FD>Isoprénoïde; Dégradation biologique; Sédiment; Aérobiose; Dénitrification; Communauté microbienne; Métabolite; Voie métabolique; Milieu marin; Phytol</FD>
<ED>Isoprenoid; Biodegradation; Sediments; Aerobiosis; Denitrification; Microbial community; Metabolite; Metabolic pathway; Marine environment</ED>
<SD>Isoprenoide; Degradación biológica; Sedimento; Aerobiosis; Desnitrificación; Comunidad microbiana; Metabolito; Vía métabolica; Medio marino</SD>
<LO>INIST-7195.354000080849240440</LO>
<ID>00-0045924</ID>
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