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Wheat genome structure and function : Genome sequence data and the international wheat genome sequencing consortium

Identifieur interne : 003A35 ( PascalFrancis/Corpus ); précédent : 003A34; suivant : 003A36

Wheat genome structure and function : Genome sequence data and the international wheat genome sequencing consortium

Auteurs : P. Moolhuijzen ; D. S. Dunn ; M. Bellgard ; M. Carter ; J. Jia ; X. Kong ; B. S. Gill ; C. Feuillet ; J. Breen ; R. Appels

Source :

RBID : Pascal:07-0390259

Descripteurs français

English descriptors

Abstract

Genome sequencing and the associated bioinformatics is now a widely accepted research tool for accelerating genetic research and the analysis of genome structure and function of wheat because it leverages similar work from other crops and plants. The International Wheat Genome Sequencing Consortium addresses the challenge of wheat genome structure and function and builds on the research efforts of Professor Bob McIntosh in the genetics of wheat. Currently, expressed sequence tags (ESTs; ∼500000 to date) are the largest sequence resource for wheat genome analyses. It is estimated that the gene coverage of the wheat EST collection is ∼60%, close to that ofArabidopsis, indicating that ∼40% of wheat genes are not represented in EST collections. The physical map of the D-genome donor species Aegilops tauschii is under construction (http://wheat.pw.usda.gov/PhysicalMapping). The technologies developed in this analysis of the D genome provide a good model for the approach to the entire wheat genome, namely compiling BAC contigs, assigning these BAC contigs to addresses in a high resolution genetic map, filling in gaps to obtain the entire physical length of a chromosome, and then large-scale sequencing.

Notice en format standard (ISO 2709)

Pour connaître la documentation sur le format Inist Standard.

pA  
A01 01  1    @0 0004-9409
A02 01      @0 AJAEA9
A03   1    @0 Aust. j. agric. res.
A05       @2 58
A06       @2 6
A08 01  1  ENG  @1 Wheat genome structure and function : Genome sequence data and the international wheat genome sequencing consortium
A09 01  1  ENG  @1 Global landscapes in cereal rust control
A11 01  1    @1 MOOLHUIJZEN (P.)
A11 02  1    @1 DUNN (D. S.)
A11 03  1    @1 BELLGARD (M.)
A11 04  1    @1 CARTER (M.)
A11 05  1    @1 JIA (J.)
A11 06  1    @1 KONG (X.)
A11 07  1    @1 GILL (B. S.)
A11 08  1    @1 FEUILLET (C.)
A11 09  1    @1 BREEN (J.)
A11 10  1    @1 APPELS (R.)
A14 01      @1 Centre for Comparative Genomics, Murdoch Universit y @2 Murdoch, WA 6150 @3 AUS @Z 1 aut. @Z 2 aut. @Z 3 aut. @Z 9 aut. @Z 10 aut.
A14 02      @1 State Agric Biotechnology Centre, Murdoch University @2 Murdoch, WA 6150 @3 AUS @Z 4 aut.
A14 03      @1 Institute of Crop Sciences, Chinese Academy of Agricultural Sciences @2 100081, Beijing @3 CHN @Z 5 aut. @Z 6 aut.
A14 04      @1 Department of Plant Pathology, Kansas State University @2 Manhattan, KS 66506 @3 USA @Z 7 aut.
A14 05      @1 UMR ASP 1095, INRA, University Blaise Pascal @2 63100 Clermont-Ferrand @3 FRA @Z 8 aut.
A20       @1 470-475
A21       @1 2007
A23 01      @0 ENG
A43 01      @1 INIST @2 5687A @5 354000162378940010
A44       @0 0000 @1 © 2007 INIST-CNRS. All rights reserved.
A45       @0 3/4 p.
A47 01  1    @0 07-0390259
A60       @1 P @2 C
A61       @0 A
A64 01  1    @0 Australian journal of agricultural research
A66 01      @0 AUS
C01 01    ENG  @0 Genome sequencing and the associated bioinformatics is now a widely accepted research tool for accelerating genetic research and the analysis of genome structure and function of wheat because it leverages similar work from other crops and plants. The International Wheat Genome Sequencing Consortium addresses the challenge of wheat genome structure and function and builds on the research efforts of Professor Bob McIntosh in the genetics of wheat. Currently, expressed sequence tags (ESTs; ∼500000 to date) are the largest sequence resource for wheat genome analyses. It is estimated that the gene coverage of the wheat EST collection is ∼60%, close to that ofArabidopsis, indicating that ∼40% of wheat genes are not represented in EST collections. The physical map of the D-genome donor species Aegilops tauschii is under construction (http://wheat.pw.usda.gov/PhysicalMapping). The technologies developed in this analysis of the D genome provide a good model for the approach to the entire wheat genome, namely compiling BAC contigs, assigning these BAC contigs to addresses in a high resolution genetic map, filling in gaps to obtain the entire physical length of a chromosome, and then large-scale sequencing.
C02 01  X    @0 002A32
C03 01  X  FRE  @0 Organisation génome @5 01
C03 01  X  ENG  @0 Genome organization @5 01
C03 01  X  SPA  @0 Organización genoma @5 01
C03 02  X  FRE  @0 Relation structure fonction @5 02
C03 02  X  ENG  @0 Structure function relationship @5 02
C03 02  X  SPA  @0 Relación estructura función @5 02
C03 03  X  FRE  @0 Génome @5 03
C03 03  X  ENG  @0 Genome @5 03
C03 03  X  SPA  @0 Genoma @5 03
C03 04  X  FRE  @0 Donnée @5 04
C03 04  X  ENG  @0 Data @5 04
C03 04  X  SPA  @0 Dato @5 04
C03 05  X  FRE  @0 International @5 05
C03 05  X  ENG  @0 International @5 05
C03 05  X  SPA  @0 Internacional @5 05
C03 06  X  FRE  @0 Séquençage @5 06
C03 06  X  ENG  @0 Sequencing @5 06
C03 06  X  SPA  @0 Sequencing @5 06
C03 07  X  FRE  @0 Agriculture @5 07
C03 07  X  ENG  @0 Agriculture @5 07
C03 07  X  SPA  @0 Agricultura @5 07
C03 08  X  FRE  @0 Triticum @2 NS @5 10
C03 08  X  ENG  @0 Triticum @2 NS @5 10
C03 08  X  SPA  @0 Triticum @2 NS @5 10
C07 01  X  FRE  @0 Gramineae @2 NS
C07 01  X  ENG  @0 Gramineae @2 NS
C07 01  X  SPA  @0 Gramineae @2 NS
C07 02  X  FRE  @0 Monocotyledones @2 NS
C07 02  X  ENG  @0 Monocotyledones @2 NS
C07 02  X  SPA  @0 Monocotyledones @2 NS
C07 03  X  FRE  @0 Angiospermae @2 NS
C07 03  X  ENG  @0 Angiospermae @2 NS
C07 03  X  SPA  @0 Angiospermae @2 NS
C07 04  X  FRE  @0 Spermatophyta @2 NS
C07 04  X  ENG  @0 Spermatophyta @2 NS
C07 04  X  SPA  @0 Spermatophyta @2 NS
N21       @1 253
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pR  
A30 01  1  ENG  @1 Global landscapes in cereal rust control. International Conference @3 Sydney AUS @4 2005-09-20

Format Inist (serveur)

NO : PASCAL 07-0390259 INIST
ET : Wheat genome structure and function : Genome sequence data and the international wheat genome sequencing consortium
AU : MOOLHUIJZEN (P.); DUNN (D. S.); BELLGARD (M.); CARTER (M.); JIA (J.); KONG (X.); GILL (B. S.); FEUILLET (C.); BREEN (J.); APPELS (R.)
AF : Centre for Comparative Genomics, Murdoch Universit y/Murdoch, WA 6150/Australie (1 aut., 2 aut., 3 aut., 9 aut., 10 aut.); State Agric Biotechnology Centre, Murdoch University/Murdoch, WA 6150/Australie (4 aut.); Institute of Crop Sciences, Chinese Academy of Agricultural Sciences/100081, Beijing/Chine (5 aut., 6 aut.); Department of Plant Pathology, Kansas State University/Manhattan, KS 66506/Etats-Unis (7 aut.); UMR ASP 1095, INRA, University Blaise Pascal/63100 Clermont-Ferrand/France (8 aut.)
DT : Publication en série; Congrès; Niveau analytique
SO : Australian journal of agricultural research; ISSN 0004-9409; Coden AJAEA9; Australie; Da. 2007; Vol. 58; No. 6; Pp. 470-475; Bibl. 3/4 p.
LA : Anglais
EA : Genome sequencing and the associated bioinformatics is now a widely accepted research tool for accelerating genetic research and the analysis of genome structure and function of wheat because it leverages similar work from other crops and plants. The International Wheat Genome Sequencing Consortium addresses the challenge of wheat genome structure and function and builds on the research efforts of Professor Bob McIntosh in the genetics of wheat. Currently, expressed sequence tags (ESTs; ∼500000 to date) are the largest sequence resource for wheat genome analyses. It is estimated that the gene coverage of the wheat EST collection is ∼60%, close to that ofArabidopsis, indicating that ∼40% of wheat genes are not represented in EST collections. The physical map of the D-genome donor species Aegilops tauschii is under construction (http://wheat.pw.usda.gov/Ph ysicalMapping). The technologies developed in this analysis of the D genome provide a good model for the approach to the entire wheat genome, namely compiling BAC contigs, assigning these BAC contigs to addresses in a high resolution genetic map, filling in gaps to obtain the entire physical length of a chromosome, and then large-scale sequencing.
CC : 002A32
FD : Organisation génome; Relation structure fonction; Génome; Donnée; International; Séquençage; Agriculture; Triticum
FG : Gramineae; Monocotyledones; Angiospermae; Spermatophyta
ED : Genome organization; Structure function relationship; Genome; Data; International; Sequencing; Agriculture; Triticum
EG : Gramineae; Monocotyledones; Angiospermae; Spermatophyta
SD : Organización genoma; Relación estructura función; Genoma; Dato; Internacional; Sequencing; Agricultura; Triticum
LO : INIST-5687A.354000162378940010
ID : 07-0390259

Links to Exploration step

Pascal:07-0390259

Le document en format XML

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<div type="abstract" xml:lang="en">Genome sequencing and the associated bioinformatics is now a widely accepted research tool for accelerating genetic research and the analysis of genome structure and function of wheat because it leverages similar work from other crops and plants. The International Wheat Genome Sequencing Consortium addresses the challenge of wheat genome structure and function and builds on the research efforts of Professor Bob McIntosh in the genetics of wheat. Currently, expressed sequence tags (ESTs; ∼500000 to date) are the largest sequence resource for wheat genome analyses. It is estimated that the gene coverage of the wheat EST collection is ∼60%, close to that ofArabidopsis, indicating that ∼40% of wheat genes are not represented in EST collections. The physical map of the D-genome donor species Aegilops tauschii is under construction (http://wheat.pw.usda.gov/PhysicalMapping). The technologies developed in this analysis of the D genome provide a good model for the approach to the entire wheat genome, namely compiling BAC contigs, assigning these BAC contigs to addresses in a high resolution genetic map, filling in gaps to obtain the entire physical length of a chromosome, and then large-scale sequencing.</div>
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<sZ>3 aut.</sZ>
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<fA14 i1="02">
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<sZ>5 aut.</sZ>
<sZ>6 aut.</sZ>
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<fA14 i1="04">
<s1>Department of Plant Pathology, Kansas State University</s1>
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<sZ>7 aut.</sZ>
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<s1>UMR ASP 1095, INRA, University Blaise Pascal</s1>
<s2>63100 Clermont-Ferrand</s2>
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<s0>Genome sequencing and the associated bioinformatics is now a widely accepted research tool for accelerating genetic research and the analysis of genome structure and function of wheat because it leverages similar work from other crops and plants. The International Wheat Genome Sequencing Consortium addresses the challenge of wheat genome structure and function and builds on the research efforts of Professor Bob McIntosh in the genetics of wheat. Currently, expressed sequence tags (ESTs; ∼500000 to date) are the largest sequence resource for wheat genome analyses. It is estimated that the gene coverage of the wheat EST collection is ∼60%, close to that ofArabidopsis, indicating that ∼40% of wheat genes are not represented in EST collections. The physical map of the D-genome donor species Aegilops tauschii is under construction (http://wheat.pw.usda.gov/PhysicalMapping). The technologies developed in this analysis of the D genome provide a good model for the approach to the entire wheat genome, namely compiling BAC contigs, assigning these BAC contigs to addresses in a high resolution genetic map, filling in gaps to obtain the entire physical length of a chromosome, and then large-scale sequencing.</s0>
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<s5>03</s5>
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<s5>04</s5>
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<fC03 i1="04" i2="X" l="ENG">
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<s5>04</s5>
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<s0>Dato</s0>
<s5>04</s5>
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<s5>05</s5>
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<s5>07</s5>
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<s5>07</s5>
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<fC03 i1="07" i2="X" l="SPA">
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<s5>07</s5>
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<fC03 i1="08" i2="X" l="FRE">
<s0>Triticum</s0>
<s2>NS</s2>
<s5>10</s5>
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<fC03 i1="08" i2="X" l="ENG">
<s0>Triticum</s0>
<s2>NS</s2>
<s5>10</s5>
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<fC03 i1="08" i2="X" l="SPA">
<s0>Triticum</s0>
<s2>NS</s2>
<s5>10</s5>
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<s2>NS</s2>
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<s0>Gramineae</s0>
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<s2>NS</s2>
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<s2>NS</s2>
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<s2>NS</s2>
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<s2>NS</s2>
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<s2>NS</s2>
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<s2>NS</s2>
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<fA30 i1="01" i2="1" l="ENG">
<s1>Global landscapes in cereal rust control. International Conference</s1>
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<ET>Wheat genome structure and function : Genome sequence data and the international wheat genome sequencing consortium</ET>
<AU>MOOLHUIJZEN (P.); DUNN (D. S.); BELLGARD (M.); CARTER (M.); JIA (J.); KONG (X.); GILL (B. S.); FEUILLET (C.); BREEN (J.); APPELS (R.)</AU>
<AF>Centre for Comparative Genomics, Murdoch Universit y/Murdoch, WA 6150/Australie (1 aut., 2 aut., 3 aut., 9 aut., 10 aut.); State Agric Biotechnology Centre, Murdoch University/Murdoch, WA 6150/Australie (4 aut.); Institute of Crop Sciences, Chinese Academy of Agricultural Sciences/100081, Beijing/Chine (5 aut., 6 aut.); Department of Plant Pathology, Kansas State University/Manhattan, KS 66506/Etats-Unis (7 aut.); UMR ASP 1095, INRA, University Blaise Pascal/63100 Clermont-Ferrand/France (8 aut.)</AF>
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<EA>Genome sequencing and the associated bioinformatics is now a widely accepted research tool for accelerating genetic research and the analysis of genome structure and function of wheat because it leverages similar work from other crops and plants. The International Wheat Genome Sequencing Consortium addresses the challenge of wheat genome structure and function and builds on the research efforts of Professor Bob McIntosh in the genetics of wheat. Currently, expressed sequence tags (ESTs; ∼500000 to date) are the largest sequence resource for wheat genome analyses. It is estimated that the gene coverage of the wheat EST collection is ∼60%, close to that ofArabidopsis, indicating that ∼40% of wheat genes are not represented in EST collections. The physical map of the D-genome donor species Aegilops tauschii is under construction (http://wheat.pw.usda.gov/Ph ysicalMapping). The technologies developed in this analysis of the D genome provide a good model for the approach to the entire wheat genome, namely compiling BAC contigs, assigning these BAC contigs to addresses in a high resolution genetic map, filling in gaps to obtain the entire physical length of a chromosome, and then large-scale sequencing.</EA>
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<EG>Gramineae; Monocotyledones; Angiospermae; Spermatophyta</EG>
<SD>Organización genoma; Relación estructura función; Genoma; Dato; Internacional; Sequencing; Agricultura; Triticum</SD>
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