CSAM: Compressed SAM format.
Identifieur interne : 003A08 ( Ncbi/Curation ); précédent : 003A07; suivant : 003A09CSAM: Compressed SAM format.
Auteurs : Rodrigo Cánovas [France] ; Alistair Moffat [Australie] ; Andrew Turpin [Australie]Source :
- Bioinformatics (Oxford, England) [ 1367-4811 ] ; 2016.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- methods : Data Compression.
- Genome, Genomics, High-Throughput Nucleotide Sequencing, Software.
Abstract
Next generation sequencing machines produce vast amounts of genomic data. For the data to be useful, it is essential that it can be stored and manipulated efficiently. This work responds to the combined challenge of compressing genomic data, while providing fast access to regions of interest, without necessitating decompression of whole files.
DOI: 10.1093/bioinformatics/btw543
PubMed: 27540265
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pubmed:27540265Le document en format XML
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<front><div type="abstract" xml:lang="en">Next generation sequencing machines produce vast amounts of genomic data. For the data to be useful, it is essential that it can be stored and manipulated efficiently. This work responds to the combined challenge of compressing genomic data, while providing fast access to regions of interest, without necessitating decompression of whole files.</div>
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