RNAcentral: a comprehensive database of non-coding RNA sequences
Identifieur interne : 003D86 ( Ncbi/Checkpoint ); précédent : 003D85; suivant : 003D87RNAcentral: a comprehensive database of non-coding RNA sequences
Auteurs :Source :
- Nucleic Acids Research [ 0305-1048 ] ; 2016.
Abstract
RNAcentral is a database of non-coding RNA (ncRNA) sequences that aggregates data from specialised ncRNA resources and provides a single entry point for accessing ncRNA sequences of all ncRNA types from all organisms. Since its launch in 2014, RNAcentral has integrated twelve new resources, taking the total number of collaborating database to 22, and began importing new types of data, such as modified nucleotides from MODOMICS and PDB. We created new species-specific identifiers that refer to unique RNA sequences within a context of single species. The website has been subject to continuous improvements focusing on text and sequence similarity searches as well as genome browsing functionality. All RNAcentral data is provided for free and is available for browsing, bulk downloads, and programmatic access at
Url:
DOI: 10.1093/nar/gkw1008
PubMed: 27794554
PubMed Central: 5210518
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 002804
- to stream Pmc, to step Curation: 002654
- to stream Pmc, to step Checkpoint: 000656
- to stream Ncbi, to step Merge: 003D86
- to stream Ncbi, to step Curation: 003D86
Links to Exploration step
PMC:5210518Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">RNAcentral: a comprehensive database of non-coding RNA sequences</title></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">27794554</idno><idno type="pmc">5210518</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210518</idno><idno type="RBID">PMC:5210518</idno><idno type="doi">10.1093/nar/gkw1008</idno><date when="2016">2016</date><idno type="wicri:Area/Pmc/Corpus">002804</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">002804</idno><idno type="wicri:Area/Pmc/Curation">002654</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">002654</idno><idno type="wicri:Area/Pmc/Checkpoint">000656</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000656</idno><idno type="wicri:Area/Ncbi/Merge">003D86</idno><idno type="wicri:Area/Ncbi/Curation">003D86</idno><idno type="wicri:Area/Ncbi/Checkpoint">003D86</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">RNAcentral: a comprehensive database of non-coding RNA sequences</title></analytic><series><title level="j">Nucleic Acids Research</title><idno type="ISSN">0305-1048</idno><idno type="eISSN">1362-4962</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>RNAcentral is a database of non-coding RNA (ncRNA) sequences that aggregates data from specialised ncRNA resources and provides a single entry point for accessing ncRNA sequences of all ncRNA types from all organisms. Since its launch in 2014, RNAcentral has integrated twelve new resources, taking the total number of collaborating database to 22, and began importing new types of data, such as modified nucleotides from MODOMICS and PDB. We created new species-specific identifiers that refer to unique RNA sequences within a context of single species. The website has been subject to continuous improvements focusing on text and sequence similarity searches as well as genome browsing functionality. All RNAcentral data is provided for free and is available for browsing, bulk downloads, and programmatic access at <ext-link ext-link-type="uri" xlink:href="http://rnacentral.org/">http://rnacentral.org/</ext-link>.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Beringer, M" uniqKey="Beringer M">M. Beringer</name></author><author><name sortKey="Rodnina, M V" uniqKey="Rodnina M">M.V. 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