Mireval: a web tool for simple microRNA prediction in genome sequences
Identifieur interne : 008678 ( Main/Exploration ); précédent : 008677; suivant : 008679Mireval: a web tool for simple microRNA prediction in genome sequences
Auteurs : William Ritchie [France] ; François-Xavier Théodule [France] ; Daniel Gautheret [France]Source :
- Bioinformatics [ 1367-4803 ] ; 2008-06-01.
Descripteurs français
- Pascal (Inist)
English descriptors
- KwdEn :
Abstract
Summary: We have developed an online tool called mirEval which can search sequences of up to 10 000 nt for novel microRNAs in multiple organisms. It is a comprehensive tool, easy to use and very informative. It will allow users with no prior knowledge of in-silico detection of microRNAs to take advantage of the most successful approaches to investigate sequences of interest. Availability: The mirEval web server is available at http://tagc.univ-mrs.fr/mireval Contact: W.Ritchie@centenary.org.au Supplementary information: Supplementary data are available at Bioinformatics online.
Url:
DOI: 10.1093/bioinformatics/btn137
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Istex, to step Corpus: 002075
- to stream Istex, to step Curation: 002075
- to stream Istex, to step Checkpoint: 001033
- to stream Main, to step Merge: 008F39
- to stream PascalFrancis, to step Corpus: 003368
- to stream PascalFrancis, to step Curation: 002C84
- to stream PascalFrancis, to step Checkpoint: 003069
- to stream Main, to step Merge: 009483
- to stream Main, to step Curation: 008678
Le document en format XML
<record><TEI wicri:istexFullTextTei="biblStruct"><teiHeader><fileDesc><titleStmt><title>Mireval: a web tool for simple microRNA prediction in genome sequences</title>
<author><name sortKey="Ritchie, William" sort="Ritchie, William" uniqKey="Ritchie W" first="William" last="Ritchie">William Ritchie</name>
</author>
<author><name sortKey="Theodule, Francois Xavier" sort="Theodule, Francois Xavier" uniqKey="Theodule F" first="François-Xavier" last="Théodule">François-Xavier Théodule</name>
</author>
<author><name sortKey="Gautheret, Daniel" sort="Gautheret, Daniel" uniqKey="Gautheret D" first="Daniel" last="Gautheret">Daniel Gautheret</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:AC52E9CF91811FBC6C1FE8AF586DC65BEF7CCFBC</idno>
<date when="2008" year="2008">2008</date>
<idno type="doi">10.1093/bioinformatics/btn137</idno>
<idno type="url">https://api.istex.fr/document/AC52E9CF91811FBC6C1FE8AF586DC65BEF7CCFBC/fulltext/pdf</idno>
<idno type="wicri:Area/Istex/Corpus">002075</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Corpus" wicri:corpus="ISTEX">002075</idno>
<idno type="wicri:Area/Istex/Curation">002075</idno>
<idno type="wicri:Area/Istex/Checkpoint">001033</idno>
<idno type="wicri:explorRef" wicri:stream="Istex" wicri:step="Checkpoint">001033</idno>
<idno type="wicri:doubleKey">1367-4803:2008:Ritchie W:mireval:a:web</idno>
<idno type="wicri:Area/Main/Merge">008F39</idno>
<idno type="wicri:source">INIST</idno>
<idno type="RBID">Pascal:08-0396758</idno>
<idno type="wicri:Area/PascalFrancis/Corpus">003368</idno>
<idno type="wicri:Area/PascalFrancis/Curation">002C84</idno>
<idno type="wicri:Area/PascalFrancis/Checkpoint">003069</idno>
<idno type="wicri:explorRef" wicri:stream="PascalFrancis" wicri:step="Checkpoint">003069</idno>
<idno type="wicri:doubleKey">1367-4803:2008:Ritchie W:mireval:a:web</idno>
<idno type="wicri:Area/Main/Merge">009483</idno>
<idno type="wicri:Area/Main/Curation">008678</idno>
<idno type="wicri:Area/Main/Exploration">008678</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title level="a">Mireval: a web tool for simple microRNA prediction in genome sequences</title>
<author><name sortKey="Ritchie, William" sort="Ritchie, William" uniqKey="Ritchie W" first="William" last="Ritchie">William Ritchie</name>
<affiliation wicri:level="3"><country xml:lang="fr">France</country>
<wicri:regionArea>INSERM U928, Technologies Avancées pour le Génome et la Clinique, Luminy Case 906, 13288 Marseille, Cedex 09, France, Centenary Institute, Gene & Stem Cell Therapy Program, Newtown, 2042 Sydney, Australia and Univ Paris-Sud 11, CNRS UMR 8621, Institut de Génétique et Microbiologie, Bat 400, 91405 Orsay Cedex</wicri:regionArea>
<placeName><region type="region" nuts="2">Île-de-France</region>
<settlement type="city">Orsay</settlement>
</placeName>
</affiliation>
<affiliation></affiliation>
</author>
<author><name sortKey="Theodule, Francois Xavier" sort="Theodule, Francois Xavier" uniqKey="Theodule F" first="François-Xavier" last="Théodule">François-Xavier Théodule</name>
<affiliation wicri:level="1"><country xml:lang="fr">France</country>
<wicri:regionArea>INSERM U928, Technologies Avancées pour le Génome et la Clinique, Luminy Case 906, 13288 Marseille, Cedex 09, France, Centenary Institute, Gene & Stem Cell Therapy Program, Newtown, 2042 Sydney, Australia and Univ Paris-Sud 11, CNRS UMR 8621, Institut de Génétique et Microbiologie, Bat 400, 91405 Orsay Cedex</wicri:regionArea>
<wicri:noRegion>91405 Orsay Cedex</wicri:noRegion>
<wicri:noRegion>91405 Orsay Cedex</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gautheret, Daniel" sort="Gautheret, Daniel" uniqKey="Gautheret D" first="Daniel" last="Gautheret">Daniel Gautheret</name>
<affiliation wicri:level="3"><country xml:lang="fr">France</country>
<wicri:regionArea>INSERM U928, Technologies Avancées pour le Génome et la Clinique, Luminy Case 906, 13288 Marseille, Cedex 09, France, Centenary Institute, Gene & Stem Cell Therapy Program, Newtown, 2042 Sydney, Australia and Univ Paris-Sud 11, CNRS UMR 8621, Institut de Génétique et Microbiologie, Bat 400, 91405 Orsay Cedex</wicri:regionArea>
<placeName><region type="region" nuts="2">Île-de-France</region>
<settlement type="city">Orsay</settlement>
</placeName>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series><title level="j">Bioinformatics</title>
<idno type="ISSN">1367-4803</idno>
<idno type="eISSN">1460-2059</idno>
<imprint><publisher>Oxford University Press</publisher>
<date type="published" when="2008-06-01">2008-06-01</date>
<biblScope unit="volume">24</biblScope>
<biblScope unit="issue">11</biblScope>
<biblScope unit="page" from="1394">1394</biblScope>
<biblScope unit="page" to="1396">1396</biblScope>
</imprint>
<idno type="ISSN">1367-4803</idno>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><idno type="ISSN">1367-4803</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bioinformatics</term>
<term>Genome</term>
<term>Nucleotide sequence</term>
<term>Prediction</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>Bioinformatique</term>
<term>Génome</term>
<term>Prédiction</term>
<term>Séquence nucléotide</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract">Summary: We have developed an online tool called mirEval which can search sequences of up to 10 000 nt for novel microRNAs in multiple organisms. It is a comprehensive tool, easy to use and very informative. It will allow users with no prior knowledge of in-silico detection of microRNAs to take advantage of the most successful approaches to investigate sequences of interest. Availability: The mirEval web server is available at http://tagc.univ-mrs.fr/mireval Contact: W.Ritchie@centenary.org.au Supplementary information: Supplementary data are available at Bioinformatics online.</div>
</front>
</TEI>
<affiliations><list><country><li>France</li>
</country>
<region><li>Île-de-France</li>
</region>
<settlement><li>Orsay</li>
</settlement>
</list>
<tree><country name="France"><region name="Île-de-France"><name sortKey="Ritchie, William" sort="Ritchie, William" uniqKey="Ritchie W" first="William" last="Ritchie">William Ritchie</name>
</region>
<name sortKey="Gautheret, Daniel" sort="Gautheret, Daniel" uniqKey="Gautheret D" first="Daniel" last="Gautheret">Daniel Gautheret</name>
<name sortKey="Theodule, Francois Xavier" sort="Theodule, Francois Xavier" uniqKey="Theodule F" first="François-Xavier" last="Théodule">François-Xavier Théodule</name>
</country>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Asie/explor/AustralieFrV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 008678 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 008678 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Wicri/Asie |area= AustralieFrV1 |flux= Main |étape= Exploration |type= RBID |clé= ISTEX:AC52E9CF91811FBC6C1FE8AF586DC65BEF7CCFBC |texte= Mireval: a web tool for simple microRNA prediction in genome sequences }}
This area was generated with Dilib version V0.6.33. |